RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 WDR90Q96KV7 1748 aa12.58□□□□□ -0.4
NUP98-220ENST00000533346 PLA2G12BQ9BX93 195 aa12.58□□□□□ -0.4
NUP98-220ENST00000533346 RTFDC1Q9BY42 306 aaPredicted RBP12.58□□□□□ -0.4
NUP98-220ENST00000533346 GPBP1L1Q9HC44 474 aaPredicted RBP12.58□□□□□ -0.4
NUP98-220ENST00000533346 GLTPD2A6NH11 291 aa12.57□□□□□ -0.4
NUP98-220ENST00000533346 KIF3CO14782 793 aa12.57□□□□□ -0.4
NUP98-220ENST00000533346 ALDH1L2Q3SY69 923 aa12.57□□□□□ -0.4
NUP98-220ENST00000533346 DDX46Q7L014 1031 aaKnown RBP12.57□□□□□ -0.4
NUP98-220ENST00000533346 KDM2BQ8NHM5 1336 aa12.57□□□□□ -0.4
NUP98-220ENST00000533346 RTL9Q8NET4 1388 aa12.56□□□□□ -0.4
NUP98-220ENST00000533346 TCERG1O14776 1098 aaKnown RBP12.56□□□□□ -0.4
NUP98-220ENST00000533346 PPEF1O14829 653 aaPredicted RBP12.56□□□□□ -0.4
NUP98-220ENST00000533346 CASP7P55210 303 aa12.56□□□□□ -0.4
NUP98-220ENST00000533346 FKBP5Q13451 457 aaPredicted RBP12.56□□□□□ -0.4
NUP98-220ENST00000533346 GCKRQ14397 625 aa12.56□□□□□ -0.4
NUP98-220ENST00000533346 LTBP1Q14766 1721 aa12.56□□□□□ -0.4
NUP98-220ENST00000533346 BEND3Q5T5X7 828 aa12.55□□□□□ -0.4
NUP98-220ENST00000533346 MRPL50Q8N5N7 158 aaKnown RBP12.55□□□□□ -0.4
NUP98-220ENST00000533346 CDCA7LQ96GN5 454 aa12.55□□□□□ -0.4
NUP98-220ENST00000533346 PTPRCP08575 1304 aa12.55□□□□□ -0.4
NUP98-220ENST00000533346 SCN4AP35499 1836 aa12.55□□□□□ -0.4
NUP98-220ENST00000533346 FZD9O00144 591 aa12.54□□□□□ -0.4
NUP98-220ENST00000533346 ALDH1L1O75891 902 aa12.54□□□□□ -0.4
NUP98-220ENST00000533346 IARSP41252 1262 aaKnown RBP12.54□□□□□ -0.4
NUP98-220ENST00000533346 CWF19L2Q2TBE0 894 aaKnown RBP12.54□□□□□ -0.4
NUP98-220ENST00000533346 DPY19L2Q6NUT2 758 aa12.54□□□□□ -0.4
NUP98-220ENST00000533346 SUPT20HQ8NEM7 779 aa12.54□□□□□ -0.4
NUP98-220ENST00000533346 TMX4Q9H1E5 349 aaPredicted RBP12.54□□□□□ -0.4
NUP98-220ENST00000533346 ZNF219Q9P2Y4 722 aaPredicted RBP12.54□□□□□ -0.4
NUP98-220ENST00000533346 CSF1RP07333 972 aa12.53□□□□□ -0.4
NUP98-220ENST00000533346 RPS8P62241 208 aaKnown RBP12.53□□□□□ -0.4
NUP98-220ENST00000533346 CCDC152Q4G0S7 254 aa12.53□□□□□ -0.4
NUP98-220ENST00000533346 OLFM4Q6UX06 510 aa12.53□□□□□ -0.4
NUP98-220ENST00000533346 TTLL11Q8NHH1 800 aa12.53□□□□□ -0.4
NUP98-220ENST00000533346 CELF1Q92879 486 aaKnown RBP12.53□□□□□ -0.4
NUP98-220ENST00000533346 DUOX1Q9NRD9 1551 aa12.52□□□□□ -0.4
NUP98-220ENST00000533346 COL4A1P02462 1669 aa12.52□□□□□ -0.4
NUP98-220ENST00000533346 TOMM70O94826 608 aa12.52□□□□□ -0.41
NUP98-220ENST00000533346 MPNDQ8N594 471 aa12.52□□□□□ -0.41
NUP98-220ENST00000533346 SSH1Q8WYL5 1049 aa12.52□□□□□ -0.41
NUP98-220ENST00000533346 L3MBTL3Q96JM7 780 aaPredicted RBP12.52□□□□□ -0.41
NUP98-220ENST00000533346 PODXL2Q9NZ53 605 aa12.52□□□□□ -0.41
NUP98-220ENST00000533346 UTYO14607 1347 aa12.52□□□□□ -0.41
NUP98-220ENST00000533346 POTECB2RU33 542 aa12.51□□□□□ -0.41
NUP98-220ENST00000533346 CTSWP56202 376 aa12.51□□□□□ -0.41
NUP98-220ENST00000533346 RTL5Q5HYW3 569 aaPredicted RBP12.51□□□□□ -0.41
NUP98-220ENST00000533346 ZNF277Q9NRM2 450 aaPredicted RBP12.51□□□□□ -0.41
NUP98-220ENST00000533346 COL4A5P29400 1685 aa12.51□□□□□ -0.41
NUP98-220ENST00000533346 F6X3S4 739 aa12.5□□□□□ -0.41
NUP98-220ENST00000533346 VEGFAP15692 232 aaPredicted RBP12.5□□□□□ -0.41
NUP98-220ENST00000533346 KIAA2012Q0VF49 1180 aa12.5□□□□□ -0.41
NUP98-220ENST00000533346 DNAJC5GQ8N7S2 189 aa12.5□□□□□ -0.41
NUP98-220ENST00000533346 RBM46Q8TBY0 533 aaKnown RBP12.5□□□□□ -0.41
NUP98-220ENST00000533346 NMRK2Q9NPI5 230 aa12.5□□□□□ -0.41
NUP98-220ENST00000533346 DPP8Q6V1X1 898 aaPredicted RBP12.49□□□□□ -0.41
NUP98-220ENST00000533346 UBE3BQ7Z3V4 1068 aa12.49□□□□□ -0.41
NUP98-220ENST00000533346 GPC2Q8N158 579 aa12.49□□□□□ -0.41
NUP98-220ENST00000533346 JDP2Q8WYK2 163 aa12.49□□□□□ -0.41
NUP98-220ENST00000533346 ARHGAP45Q92619 1136 aa12.49□□□□□ -0.41
NUP98-220ENST00000533346 CDC5LQ99459 802 aaKnown RBP12.49□□□□□ -0.41
NUP98-220ENST00000533346 SRCIN1Q9C0H9 1055 aa12.49□□□□□ -0.41
NUP98-220ENST00000533346 RRAGCQ9HB90 399 aa12.49□□□□□ -0.41
NUP98-220ENST00000533346 SEC31BQ9NQW1 1179 aa12.49□□□□□ -0.41
NUP98-220ENST00000533346 BSDC1Q9NW68 430 aaPredicted RBP12.49□□□□□ -0.41
NUP98-220ENST00000533346 ZBED9Q6R2W3 1325 aa12.48□□□□□ -0.41
NUP98-220ENST00000533346 GRM8O00222 908 aa12.48□□□□□ -0.41
NUP98-220ENST00000533346 HTRA3P83110 453 aa12.48□□□□□ -0.41
NUP98-220ENST00000533346 FOXO4P98177 505 aa12.48□□□□□ -0.41
NUP98-220ENST00000533346 PCNTO95613 3336 aa12.48□□□□□ -0.41
NUP98-220ENST00000533346 PSME4Q14997 1843 aa12.48□□□□□ -0.41
NUP98-220ENST00000533346 DDNO94850 711 aaPredicted RBP12.47□□□□□ -0.41
NUP98-220ENST00000533346 RARSP54136 660 aaKnown RBP12.47□□□□□ -0.41
NUP98-220ENST00000533346 FSTL1Q12841 308 aa12.47□□□□□ -0.41
NUP98-220ENST00000533346 ANKRD18AQ8IVF6 992 aa12.47□□□□□ -0.41
NUP98-220ENST00000533346 LARGE2Q8N3Y3 721 aa12.47□□□□□ -0.41
NUP98-220ENST00000533346 JARID2Q92833 1246 aaPredicted RBP12.47□□□□□ -0.41
NUP98-220ENST00000533346 GREM2Q9H772 168 aa12.47□□□□□ -0.41
NUP98-220ENST00000533346 ADAMTSL1Q8N6G6 1762 aa12.46□□□□□ -0.41
NUP98-220ENST00000533346 IQCA1LA6NCM1 817 aa12.46□□□□□ -0.41
NUP98-220ENST00000533346 PPIP5K2O43314 1243 aa12.46□□□□□ -0.41
NUP98-220ENST00000533346 EIF6P56537 245 aaKnown RBP12.46□□□□□ -0.41
NUP98-220ENST00000533346 GPSM2P81274 684 aa12.46□□□□□ -0.41
NUP98-220ENST00000533346 HNRNPUQ00839 825 aaKnown RBP eCLIP12.46□□□□□ -0.41
NUP98-220ENST00000533346 SLC51AQ86UW1 340 aa12.46□□□□□ -0.41
NUP98-220ENST00000533346 POTEDQ86YR6 584 aa12.46□□□□□ -0.41
NUP98-220ENST00000533346 TBC1D16Q8TBP0 767 aa12.46□□□□□ -0.41
NUP98-220ENST00000533346 EYA3Q99504 573 aa12.46□□□□□ -0.41
NUP98-220ENST00000533346 POLLQ9UGP5 575 aa12.46□□□□□ -0.41
NUP98-220ENST00000533346 ZNRF3Q9ULT6 936 aa12.46□□□□□ -0.41
NUP98-220ENST00000533346 NSFL1CQ9UNZ2 370 aaKnown RBP12.46□□□□□ -0.41
NUP98-220ENST00000533346 SPEF2Q9C093 1822 aa12.46□□□□□ -0.42
NUP98-220ENST00000533346 A0A1B0GUL6 1792 aa12.46□□□□□ -0.42
NUP98-220ENST00000533346 ZNF541Q9H0D2 1346 aa12.45□□□□□ -0.42
NUP98-220ENST00000533346 AOC3Q16853 763 aa12.45□□□□□ -0.42
NUP98-220ENST00000533346 WASHC4Q2M389 1173 aa12.45□□□□□ -0.42
NUP98-220ENST00000533346 RABL6Q3YEC7 729 aaPredicted RBP12.45□□□□□ -0.42
NUP98-220ENST00000533346 COL13A1Q5TAT6 717 aaPredicted RBP12.45□□□□□ -0.42
NUP98-220ENST00000533346 NIM1KQ8IY84 436 aa12.45□□□□□ -0.42
NUP98-220ENST00000533346 API5Q9BZZ5 524 aaKnown RBP12.45□□□□□ -0.42
NUP98-220ENST00000533346 SMC4Q9NTJ3 1288 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms