RNA–Protein interactions for RNA: ENST00000533270.1

COMMD5-206, Transcript of COMM domain containing 5, humanhuman

TSL 3

Gene COMMD5, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD5-206ENST00000533270 ZNF277Q9NRM2 450 aaPredicted RBP28.3■■■□□ 2.12
COMMD5-206ENST00000533270 KIF3CO14782 793 aa28.29■■■□□ 2.12
COMMD5-206ENST00000533270 PDE8AO60658 829 aa28.29■■■□□ 2.12
COMMD5-206ENST00000533270 LINS1Q8NG48 757 aa28.29■■■□□ 2.12
COMMD5-206ENST00000533270 NMRK2Q9NPI5 230 aa28.29■■■□□ 2.12
COMMD5-206ENST00000533270 HSP90B1P14625 803 aaKnown RBP28.28■■■□□ 2.12
COMMD5-206ENST00000533270 GCKRQ14397 625 aa28.28■■■□□ 2.12
COMMD5-206ENST00000533270 GRIPAP1Q4V328 841 aa28.28■■■□□ 2.12
COMMD5-206ENST00000533270 MRPL50Q8N5N7 158 aaKnown RBP28.28■■■□□ 2.12
COMMD5-206ENST00000533270 CELF1Q92879 486 aaKnown RBP28.28■■■□□ 2.12
COMMD5-206ENST00000533270 KDM2BQ8NHM5 1336 aa28.27■■■□□ 2.12
COMMD5-206ENST00000533270 H7C1W4 665 aa28.27■■■□□ 2.12
COMMD5-206ENST00000533270 SP8Q8IXZ3 490 aa28.27■■■□□ 2.12
COMMD5-206ENST00000533270 COL4A5P29400 1685 aa28.26■■■□□ 2.12
COMMD5-206ENST00000533270 GLTPD2A6NH11 291 aa28.26■■■□□ 2.11
COMMD5-206ENST00000533270 IARSP41252 1262 aaKnown RBP28.26■■■□□ 2.11
COMMD5-206ENST00000533270 BEND3Q5T5X7 828 aa28.26■■■□□ 2.11
COMMD5-206ENST00000533270 SSH1Q8WYL5 1049 aa28.26■■■□□ 2.11
COMMD5-206ENST00000533270 DUOX1Q9NRD9 1551 aa28.24■■■□□ 2.11
COMMD5-206ENST00000533270 CASP7P55210 303 aa28.24■■■□□ 2.11
COMMD5-206ENST00000533270 C1QTNF8P60827 252 aa28.24■■■□□ 2.11
COMMD5-206ENST00000533270 UBE3BQ7Z3V4 1068 aa28.24■■■□□ 2.11
COMMD5-206ENST00000533270 TMC4Q7Z404 712 aa28.24■■■□□ 2.11
COMMD5-206ENST00000533270 SEC31BQ9NQW1 1179 aa28.24■■■□□ 2.11
COMMD5-206ENST00000533270 WDR90Q96KV7 1748 aa28.23■■■□□ 2.11
COMMD5-206ENST00000533270 CCDC152Q4G0S7 254 aa28.23■■■□□ 2.11
COMMD5-206ENST00000533270 CTSWP56202 376 aa28.22■■■□□ 2.11
COMMD5-206ENST00000533270 LTBP1Q14766 1721 aa28.22■■■□□ 2.11
COMMD5-206ENST00000533270 TMX4Q9H1E5 349 aaPredicted RBP28.22■■■□□ 2.11
COMMD5-206ENST00000533270 CT47B1P0C2W7 299 aaPredicted RBP28.21■■■□□ 2.11
COMMD5-206ENST00000533270 HNRNPUQ00839 825 aaKnown RBP eCLIP28.21■■■□□ 2.11
COMMD5-206ENST00000533270 ALDH1L2Q3SY69 923 aa28.21■■■□□ 2.11
COMMD5-206ENST00000533270 CCDC85AQ96PX6 553 aaPredicted RBP28.21■■■□□ 2.11
COMMD5-206ENST00000533270 BCL2L13Q9BXK5 485 aa28.21■■■□□ 2.11
COMMD5-206ENST00000533270 RTFDC1Q9BY42 306 aaPredicted RBP28.21■■■□□ 2.11
COMMD5-206ENST00000533270 TTLL11Q8NHH1 800 aa28.2■■■□□ 2.1
COMMD5-206ENST00000533270 PLA2G12BQ9BX93 195 aa28.2■■■□□ 2.1
COMMD5-206ENST00000533270 RPS8P62241 208 aaKnown RBP28.19■■■□□ 2.1
COMMD5-206ENST00000533270 DPY19L2Q6NUT2 758 aa28.19■■■□□ 2.1
COMMD5-206ENST00000533270 MPNDQ8N594 471 aa28.19■■■□□ 2.1
COMMD5-206ENST00000533270 RRAGCQ9HB90 399 aa28.19■■■□□ 2.1
COMMD5-206ENST00000533270 DPP8Q6V1X1 898 aaPredicted RBP28.18■■■□□ 2.1
COMMD5-206ENST00000533270 SPEF2Q9C093 1822 aa28.18■■■□□ 2.1
COMMD5-206ENST00000533270 PTPRCP08575 1304 aa28.18■■■□□ 2.1
COMMD5-206ENST00000533270 ZNF541Q9H0D2 1346 aa28.18■■■□□ 2.1
COMMD5-206ENST00000533270 RTL9Q8NET4 1388 aa28.17■■■□□ 2.1
COMMD5-206ENST00000533270 FZD9O00144 591 aa28.17■■■□□ 2.1
COMMD5-206ENST00000533270 POTECB2RU33 542 aa28.16■■■□□ 2.1
COMMD5-206ENST00000533270 DDNO94850 711 aaPredicted RBP28.16■■■□□ 2.1
COMMD5-206ENST00000533270 SLC4A10Q6U841 1118 aa28.16■■■□□ 2.1
COMMD5-206ENST00000533270 LARGE2Q8N3Y3 721 aa28.16■■■□□ 2.1
COMMD5-206ENST00000533270 SMC4Q9NTJ3 1288 aa28.16■■■□□ 2.1
COMMD5-206ENST00000533270 ALDH1L1O75891 902 aa28.15■■■□□ 2.1
COMMD5-206ENST00000533270 AOC3Q16853 763 aa28.15■■■□□ 2.1
COMMD5-206ENST00000533270 SUPT20HQ8NEM7 779 aa28.15■■■□□ 2.1
COMMD5-206ENST00000533270 SRCIN1Q9C0H9 1055 aa28.15■■■□□ 2.1
COMMD5-206ENST00000533270 VPS33BQ9H267 617 aa28.15■■■□□ 2.1
COMMD5-206ENST00000533270 GREM2Q9H772 168 aa28.15■■■□□ 2.1
COMMD5-206ENST00000533270 PPIP5K2O43314 1243 aa28.14■■■□□ 2.1
COMMD5-206ENST00000533270 JDP2Q8WYK2 163 aa28.14■■■□□ 2.1
COMMD5-206ENST00000533270 GRM8O00222 908 aa28.13■■■□□ 2.09
COMMD5-206ENST00000533270 CSF1RP07333 972 aa28.13■■■□□ 2.09
COMMD5-206ENST00000533270 GPSM2P81274 684 aa28.13■■■□□ 2.09
COMMD5-206ENST00000533270 TOMM70O94826 608 aa28.12■■■□□ 2.09
COMMD5-206ENST00000533270 ANKRD18AQ8IVF6 992 aa28.12■■■□□ 2.09
COMMD5-206ENST00000533270 NSFL1CQ9UNZ2 370 aaKnown RBP28.12■■■□□ 2.09
COMMD5-206ENST00000533270 SCN4AP35499 1836 aa28.11■■■□□ 2.09
COMMD5-206ENST00000533270 VEGFAP15692 232 aaPredicted RBP28.11■■■□□ 2.09
COMMD5-206ENST00000533270 BRPF1P55201 1214 aaPredicted RBP28.11■■■□□ 2.09
COMMD5-206ENST00000533270 KIAA2012Q0VF49 1180 aa28.11■■■□□ 2.09
COMMD5-206ENST00000533270 CDC5LQ99459 802 aaKnown RBP28.11■■■□□ 2.09
COMMD5-206ENST00000533270 RARSP54136 660 aaKnown RBP28.1■■■□□ 2.09
COMMD5-206ENST00000533270 FOXO4P98177 505 aa28.1■■■□□ 2.09
COMMD5-206ENST00000533270 L3MBTL3Q96JM7 780 aaPredicted RBP28.1■■■□□ 2.09
COMMD5-206ENST00000533270 FAM161AQ3B820 660 aa28.09■■■□□ 2.09
COMMD5-206ENST00000533270 NIM1KQ8IY84 436 aa28.09■■■□□ 2.09
COMMD5-206ENST00000533270 PODXL2Q9NZ53 605 aa28.09■■■□□ 2.09
COMMD5-206ENST00000533270 POLLQ9UGP5 575 aa28.09■■■□□ 2.09
COMMD5-206ENST00000533270 ZBED9Q6R2W3 1325 aa28.09■■■□□ 2.09
COMMD5-206ENST00000533270 EPHA10Q5JZY3 1008 aa28.08■■■□□ 2.09
COMMD5-206ENST00000533270 C9orf78Q9NZ63 289 aaPredicted RBP28.08■■■□□ 2.09
COMMD5-206ENST00000533270 ITGA6P23229 1130 aa28.07■■■□□ 2.08
COMMD5-206ENST00000533270 C16orf71Q8IYS4 520 aaPredicted RBP28.07■■■□□ 2.08
COMMD5-206ENST00000533270 TBC1D16Q8TBP0 767 aa28.07■■■□□ 2.08
COMMD5-206ENST00000533270 RBM46Q8TBY0 533 aaKnown RBP28.07■■■□□ 2.08
COMMD5-206ENST00000533270 UTYO14607 1347 aa28.07■■■□□ 2.08
COMMD5-206ENST00000533270 EIF6P56537 245 aaKnown RBP28.06■■■□□ 2.08
COMMD5-206ENST00000533270 GPC2Q8N158 579 aa28.06■■■□□ 2.08
COMMD5-206ENST00000533270 BSDC1Q9NW68 430 aaPredicted RBP28.06■■■□□ 2.08
COMMD5-206ENST00000533270 NOB1Q9ULX3 412 aaKnown RBP28.06■■■□□ 2.08
COMMD5-206ENST00000533270 NBPF7P0C2Y1 421 aaPredicted RBP28.05■■■□□ 2.08
COMMD5-206ENST00000533270 ZNRF3Q9ULT6 936 aa28.05■■■□□ 2.08
COMMD5-206ENST00000533270 C6orf229H3BNL8 230 aa28.04■■■□□ 2.08
COMMD5-206ENST00000533270 WASHC4Q2M389 1173 aa28.04■■■□□ 2.08
COMMD5-206ENST00000533270 KAZALD1Q96I82 304 aa28.04■■■□□ 2.08
COMMD5-206ENST00000533270 SUCLG2Q96I99 432 aa28.04■■■□□ 2.08
COMMD5-206ENST00000533270 GPR101Q96P66 508 aaPredicted RBP28.04■■■□□ 2.08
COMMD5-206ENST00000533270 XDHP47989 1333 aa28.03■■■□□ 2.08
COMMD5-206ENST00000533270 ANKIB1Q9P2G1 1089 aa28.03■■■□□ 2.08
COMMD5-206ENST00000533270 MINPP1Q9UNW1 487 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms