RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 MEIS3Q99687 375 aa14.11□□□□□ -0.15
TRAPPC4-211ENST00000533012 CHMP4BQ9H444 224 aaKnown RBP14.11□□□□□ -0.15
TRAPPC4-211ENST00000533012 COG6Q9Y2V7 657 aa14.11□□□□□ -0.15
TRAPPC4-211ENST00000533012 SUPT16HQ9Y5B9 1047 aaKnown RBP14.11□□□□□ -0.15
TRAPPC4-211ENST00000533012 DCAF8L1A6NGE4 600 aa14.1□□□□□ -0.15
TRAPPC4-211ENST00000533012 ZBTB7BO15156 539 aaPredicted RBP14.1□□□□□ -0.15
TRAPPC4-211ENST00000533012 CSF1RP07333 972 aa14.1□□□□□ -0.15
TRAPPC4-211ENST00000533012 MVPQ14764 893 aaKnown RBP14.1□□□□□ -0.15
TRAPPC4-211ENST00000533012 C20orf194Q5TEA3 1177 aa14.1□□□□□ -0.15
TRAPPC4-211ENST00000533012 PELP1Q8IZL8 1130 aaKnown RBP14.1□□□□□ -0.15
TRAPPC4-211ENST00000533012 CCDC85AQ96PX6 553 aaPredicted RBP14.1□□□□□ -0.15
TRAPPC4-211ENST00000533012 WWC3Q9ULE0 1092 aa14.1□□□□□ -0.15
TRAPPC4-211ENST00000533012 DDX19BQ9UMR2 479 aa14.1□□□□□ -0.15
TRAPPC4-211ENST00000533012 BCS1LQ9Y276 419 aa14.1□□□□□ -0.15
TRAPPC4-211ENST00000533012 BBOX1O75936 387 aa14.09□□□□□ -0.15
TRAPPC4-211ENST00000533012 GNAI2P04899 355 aa14.09□□□□□ -0.15
TRAPPC4-211ENST00000533012 GPR162Q16538 588 aa14.09□□□□□ -0.15
TRAPPC4-211ENST00000533012 EPHA10Q5JZY3 1008 aa14.09□□□□□ -0.15
TRAPPC4-211ENST00000533012 LMBR1LQ6UX01 489 aa14.09□□□□□ -0.15
TRAPPC4-211ENST00000533012 BICC1Q9H694 974 aaKnown RBP14.09□□□□□ -0.15
TRAPPC4-211ENST00000533012 CHMP3Q9Y3E7 222 aa14.09□□□□□ -0.15
TRAPPC4-211ENST00000533012 GRAPQ13588 217 aa14.08□□□□□ -0.16
TRAPPC4-211ENST00000533012 GRAPLQ8TC17 118 aaPredicted RBP14.08□□□□□ -0.16
TRAPPC4-211ENST00000533012 KAZALD1Q96I82 304 aa14.08□□□□□ -0.16
TRAPPC4-211ENST00000533012 CDC5LQ99459 802 aaKnown RBP14.08□□□□□ -0.16
TRAPPC4-211ENST00000533012 TMX4Q9H1E5 349 aaPredicted RBP14.08□□□□□ -0.16
TRAPPC4-211ENST00000533012 GREM2Q9H772 168 aa14.08□□□□□ -0.16
TRAPPC4-211ENST00000533012 LRRFIP2Q9Y608 721 aaKnown RBP14.08□□□□□ -0.16
TRAPPC4-211ENST00000533012 ANKRD18BA2A2Z9 1011 aa14.07□□□□□ -0.16
TRAPPC4-211ENST00000533012 ITGA6P23229 1130 aa14.07□□□□□ -0.16
TRAPPC4-211ENST00000533012 RPS8P62241 208 aaKnown RBP14.07□□□□□ -0.16
TRAPPC4-211ENST00000533012 IFIT5Q13325 482 aaKnown RBP14.07□□□□□ -0.16
TRAPPC4-211ENST00000533012 CCDC57Q2TAC2 916 aa14.07□□□□□ -0.16
TRAPPC4-211ENST00000533012 RABL6Q3YEC7 729 aaPredicted RBP14.07□□□□□ -0.16
TRAPPC4-211ENST00000533012 PRPF40BQ6NWY9 871 aaKnown RBP14.07□□□□□ -0.16
TRAPPC4-211ENST00000533012 SEC31BQ9NQW1 1179 aa14.07□□□□□ -0.16
TRAPPC4-211ENST00000533012 KIF13BQ9NQT8 1826 aa14.06□□□□□ -0.16
TRAPPC4-211ENST00000533012 PPEF1O14829 653 aaPredicted RBP14.06□□□□□ -0.16
TRAPPC4-211ENST00000533012 TMC4Q7Z404 712 aa14.06□□□□□ -0.16
TRAPPC4-211ENST00000533012 ANKRD18AQ8IVF6 992 aa14.06□□□□□ -0.16
TRAPPC4-211ENST00000533012 ANKRD44Q8N8A2 993 aa14.06□□□□□ -0.16
TRAPPC4-211ENST00000533012 CELF1Q92879 486 aaKnown RBP14.06□□□□□ -0.16
TRAPPC4-211ENST00000533012 RTL9Q8NET4 1388 aa14.06□□□□□ -0.16
TRAPPC4-211ENST00000533012 C21orf2O43822 256 aa14.05□□□□□ -0.16
TRAPPC4-211ENST00000533012 GRIN3BO60391 1043 aa14.05□□□□□ -0.16
TRAPPC4-211ENST00000533012 IGHMBP2P38935 993 aaKnown RBP14.05□□□□□ -0.16
TRAPPC4-211ENST00000533012 FAM161AQ3B820 660 aa14.05□□□□□ -0.16
TRAPPC4-211ENST00000533012 TAF7LQ5H9L4 462 aa14.05□□□□□ -0.16
TRAPPC4-211ENST00000533012 SOGA3Q5TF21 947 aa14.05□□□□□ -0.16
TRAPPC4-211ENST00000533012 CC2D2BQ6DHV5 1058 aa14.05□□□□□ -0.16
TRAPPC4-211ENST00000533012 ZNF219Q9P2Y4 722 aaPredicted RBP14.05□□□□□ -0.16
TRAPPC4-211ENST00000533012 ANKRD31Q8N7Z5 1873 aa14.04□□□□□ -0.16
TRAPPC4-211ENST00000533012 YBX3P16989 372 aaKnown RBP eCLIP14.04□□□□□ -0.16
TRAPPC4-211ENST00000533012 SP8Q8IXZ3 490 aa14.04□□□□□ -0.16
TRAPPC4-211ENST00000533012 C7orf43Q8WVR3 580 aa14.04□□□□□ -0.16
TRAPPC4-211ENST00000533012 MPHOSPH8Q99549 860 aa14.04□□□□□ -0.16
TRAPPC4-211ENST00000533012 ZBTB40Q9NUA8 1239 aa14.04□□□□□ -0.16
TRAPPC4-211ENST00000533012 ATP6V0A2Q9Y487 856 aa14.04□□□□□ -0.16
TRAPPC4-211ENST00000533012 GRIPAP1Q4V328 841 aa14.03□□□□□ -0.16
TRAPPC4-211ENST00000533012 ARHGAP27Q6ZUM4 889 aa14.03□□□□□ -0.16
TRAPPC4-211ENST00000533012 BSDC1Q9NW68 430 aaPredicted RBP14.03□□□□□ -0.16
TRAPPC4-211ENST00000533012 TNRC6CQ9HCJ0 1690 aaKnown RBP14.03□□□□□ -0.16
TRAPPC4-211ENST00000533012 N4BP2Q86UW6 1770 aaPredicted RBP14.02□□□□□ -0.16
TRAPPC4-211ENST00000533012 DDX60Q8IY21 1712 aaKnown RBP14.02□□□□□ -0.16
TRAPPC4-211ENST00000533012 SRGAP3O43295 1099 aa14.02□□□□□ -0.17
TRAPPC4-211ENST00000533012 MTX1Q13505 466 aa14.02□□□□□ -0.17
TRAPPC4-211ENST00000533012 CCDC93Q567U6 631 aa14.02□□□□□ -0.17
TRAPPC4-211ENST00000533012 LDHAL6AQ6ZMR3 332 aa14.02□□□□□ -0.17
TRAPPC4-211ENST00000533012 RTKN2Q8IZC4 609 aa14.02□□□□□ -0.17
TRAPPC4-211ENST00000533012 CRBNQ96SW2 442 aa14.02□□□□□ -0.17
TRAPPC4-211ENST00000533012 C1orf115Q9H7X2 142 aa14.02□□□□□ -0.17
TRAPPC4-211ENST00000533012 ATP8B2P98198 1209 aa14.01□□□□□ -0.17
TRAPPC4-211ENST00000533012 ZNF594Q96JF6 807 aaPredicted RBP14.01□□□□□ -0.17
TRAPPC4-211ENST00000533012 KIAA1551Q9HCM1 1747 aa14.01□□□□□ -0.17
TRAPPC4-211ENST00000533012 OLFM4Q6UX06 510 aa14□□□□□ -0.17
TRAPPC4-211ENST00000533012 RPAP2Q8IXW5 612 aaPredicted RBP14□□□□□ -0.17
TRAPPC4-211ENST00000533012 MPNDQ8N594 471 aa14□□□□□ -0.17
TRAPPC4-211ENST00000533012 CNNM1Q9NRU3 951 aa14□□□□□ -0.17
TRAPPC4-211ENST00000533012 NSFL1CQ9UNZ2 370 aaKnown RBP14□□□□□ -0.17
TRAPPC4-211ENST00000533012 RFX5P48382 616 aaPredicted RBP13.99□□□□□ -0.17
TRAPPC4-211ENST00000533012 AAMPQ13685 434 aa13.99□□□□□ -0.17
TRAPPC4-211ENST00000533012 ANKIB1Q9P2G1 1089 aa13.99□□□□□ -0.17
TRAPPC4-211ENST00000533012 MINPP1Q9UNW1 487 aa13.99□□□□□ -0.17
TRAPPC4-211ENST00000533012 COL11A2P13942 1736 aaPredicted RBP13.98□□□□□ -0.17
TRAPPC4-211ENST00000533012 PNMA6EA0A0J9YXQ4 647 aa13.98□□□□□ -0.17
TRAPPC4-211ENST00000533012 PTPN12Q05209 780 aaKnown RBP13.98□□□□□ -0.17
TRAPPC4-211ENST00000533012 CEP85Q6P2H3 762 aa13.98□□□□□ -0.17
TRAPPC4-211ENST00000533012 DPP8Q6V1X1 898 aaPredicted RBP13.98□□□□□ -0.17
TRAPPC4-211ENST00000533012 KLHDC4Q8TBB5 520 aa13.98□□□□□ -0.17
TRAPPC4-211ENST00000533012 ANKRD2Q9GZV1 360 aa13.98□□□□□ -0.17
TRAPPC4-211ENST00000533012 COPRSQ9NQ92 184 aa13.98□□□□□ -0.17
TRAPPC4-211ENST00000533012 FBXO3Q9UK99 471 aa13.98□□□□□ -0.17
TRAPPC4-211ENST00000533012 LAMB2P55268 1798 aa13.98□□□□□ -0.17
TRAPPC4-211ENST00000533012 GOLGB1Q14789 3259 aaKnown RBP13.98□□□□□ -0.17
TRAPPC4-211ENST00000533012 EYA2O00167 538 aa13.97□□□□□ -0.17
TRAPPC4-211ENST00000533012 HMMRO75330 724 aa13.97□□□□□ -0.17
TRAPPC4-211ENST00000533012 GPSM2P81274 684 aa13.97□□□□□ -0.17
TRAPPC4-211ENST00000533012 FKBP4Q02790 459 aaKnown RBP eCLIP13.97□□□□□ -0.17
TRAPPC4-211ENST00000533012 CHRNDQ07001 517 aa13.97□□□□□ -0.17
TRAPPC4-211ENST00000533012 SUPT20HQ8NEM7 779 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms