RNA–Protein interactions for RNA: ENST00000532623.5

PKNOX2-207, Transcript of PBX/knotted 1 homeobox 2, humanhuman

TSL 2

Gene PKNOX2, Length 1,654 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2-207ENST00000532623 CCDC85AQ96PX6 553 aaPredicted RBP20.14■□□□□ 0.81
PKNOX2-207ENST00000532623 CCDC88AQ3V6T2 1871 aa20.14■□□□□ 0.81
PKNOX2-207ENST00000532623 H7C1W4 665 aa20.13■□□□□ 0.81
PKNOX2-207ENST00000532623 GRAPQ13588 217 aa20.13■□□□□ 0.81
PKNOX2-207ENST00000532623 GRAPLQ8TC17 118 aaPredicted RBP20.13■□□□□ 0.81
PKNOX2-207ENST00000532623 PTPRCP08575 1304 aa20.13■□□□□ 0.81
PKNOX2-207ENST00000532623 LTBP3Q9NS15 1303 aa20.13■□□□□ 0.81
PKNOX2-207ENST00000532623 RTKN2Q8IZC4 609 aa20.13■□□□□ 0.81
PKNOX2-207ENST00000532623 BBOX1O75936 387 aa20.12■□□□□ 0.81
PKNOX2-207ENST00000532623 FKBP4Q02790 459 aaKnown RBP eCLIP20.12■□□□□ 0.81
PKNOX2-207ENST00000532623 CELF1Q92879 486 aaKnown RBP20.12■□□□□ 0.81
PKNOX2-207ENST00000532623 RARSP54136 660 aaKnown RBP20.11■□□□□ 0.81
PKNOX2-207ENST00000532623 CC2D2BQ6DHV5 1058 aa20.11■□□□□ 0.81
PKNOX2-207ENST00000532623 TMX4Q9H1E5 349 aaPredicted RBP20.11■□□□□ 0.81
PKNOX2-207ENST00000532623 SEC31BQ9NQW1 1179 aa20.11■□□□□ 0.81
PKNOX2-207ENST00000532623 ATP6V0A2Q9Y487 856 aa20.11■□□□□ 0.81
PKNOX2-207ENST00000532623 CCDC152Q4G0S7 254 aa20.1■□□□□ 0.81
PKNOX2-207ENST00000532623 SRCIN1Q9C0H9 1055 aa20.1■□□□□ 0.81
PKNOX2-207ENST00000532623 ZNF277Q9NRM2 450 aaPredicted RBP20.1■□□□□ 0.81
PKNOX2-207ENST00000532623 SNED1Q8TER0 1413 aa20.1■□□□□ 0.81
PKNOX2-207ENST00000532623 CASP7P55210 303 aa20.1■□□□□ 0.81
PKNOX2-207ENST00000532623 CTSWP56202 376 aa20.1■□□□□ 0.81
PKNOX2-207ENST00000532623 COL4A1P02462 1669 aa20.09■□□□□ 0.81
PKNOX2-207ENST00000532623 SP8Q8IXZ3 490 aa20.09■□□□□ 0.81
PKNOX2-207ENST00000532623 GPBP1L1Q9HC44 474 aaPredicted RBP20.09■□□□□ 0.81
PKNOX2-207ENST00000532623 NOB1Q9ULX3 412 aaKnown RBP20.09■□□□□ 0.81
PKNOX2-207ENST00000532623 TTLL11Q8NHH1 800 aa20.08■□□□□ 0.81
PKNOX2-207ENST00000532623 ALDH1L1O75891 902 aa20.07■□□□□ 0.8
PKNOX2-207ENST00000532623 PSMD1Q99460 953 aa20.07■□□□□ 0.8
PKNOX2-207ENST00000532623 C9orf78Q9NZ63 289 aaPredicted RBP20.07■□□□□ 0.8
PKNOX2-207ENST00000532623 MYH3P11055 1940 aa20.07■□□□□ 0.8
PKNOX2-207ENST00000532623 TIAM2Q8IVF5 1701 aa20.07■□□□□ 0.8
PKNOX2-207ENST00000532623 GRM8O00222 908 aa20.07■□□□□ 0.8
PKNOX2-207ENST00000532623 RPS8P62241 208 aaKnown RBP20.07■□□□□ 0.8
PKNOX2-207ENST00000532623 GRIPAP1Q4V328 841 aa20.07■□□□□ 0.8
PKNOX2-207ENST00000532623 GREM2Q9H772 168 aa20.07■□□□□ 0.8
PKNOX2-207ENST00000532623 IARSP41252 1262 aaKnown RBP20.06■□□□□ 0.8
PKNOX2-207ENST00000532623 TMC4Q7Z404 712 aa20.06■□□□□ 0.8
PKNOX2-207ENST00000532623 PLA2G12BQ9BX93 195 aa20.06■□□□□ 0.8
PKNOX2-207ENST00000532623 DICER1Q9UPY3 1922 aaKnown RBP20.06■□□□□ 0.8
PKNOX2-207ENST00000532623 BRPF1P55201 1214 aaPredicted RBP20.05■□□□□ 0.8
PKNOX2-207ENST00000532623 DPP8Q6V1X1 898 aaPredicted RBP20.05■□□□□ 0.8
PKNOX2-207ENST00000532623 MPNDQ8N594 471 aa20.05■□□□□ 0.8
PKNOX2-207ENST00000532623 ZC3H4Q9UPT8 1303 aaKnown RBP20.05■□□□□ 0.8
PKNOX2-207ENST00000532623 BCAR3O75815 825 aa20.04■□□□□ 0.8
PKNOX2-207ENST00000532623 ANKRD18AQ8IVF6 992 aa20.03■□□□□ 0.8
PKNOX2-207ENST00000532623 KIF16BQ96L93 1317 aa20.03■□□□□ 0.8
PKNOX2-207ENST00000532623 NBPF7P0C2Y1 421 aaPredicted RBP20.03■□□□□ 0.8
PKNOX2-207ENST00000532623 FAM161AQ3B820 660 aa20.03■□□□□ 0.8
PKNOX2-207ENST00000532623 CDC5LQ99459 802 aaKnown RBP20.03■□□□□ 0.8
PKNOX2-207ENST00000532623 API5Q9BZZ5 524 aaKnown RBP20.03■□□□□ 0.8
PKNOX2-207ENST00000532623 CSF1RP07333 972 aa20.02■□□□□ 0.8
PKNOX2-207ENST00000532623 FOXO4P98177 505 aa20.02■□□□□ 0.8
PKNOX2-207ENST00000532623 NSFL1CQ9UNZ2 370 aaKnown RBP20.02■□□□□ 0.8
PKNOX2-207ENST00000532623 KDM2BQ8NHM5 1336 aa20.02■□□□□ 0.8
PKNOX2-207ENST00000532623 LRRC37AA6NMS7 1700 aa20.02■□□□□ 0.8
PKNOX2-207ENST00000532623 EPHA10Q5JZY3 1008 aa20.01■□□□□ 0.79
PKNOX2-207ENST00000532623 LARGE2Q8N3Y3 721 aa20.01■□□□□ 0.79
PKNOX2-207ENST00000532623 FRAT1Q92837 279 aaPredicted RBP20.01■□□□□ 0.79
PKNOX2-207ENST00000532623 NMRK2Q9NPI5 230 aa20.01■□□□□ 0.79
PKNOX2-207ENST00000532623 CHMP3Q9Y3E7 222 aa20.01■□□□□ 0.79
PKNOX2-207ENST00000532623 RTL9Q8NET4 1388 aa20.01■□□□□ 0.79
PKNOX2-207ENST00000532623 GLTPD2A6NH11 291 aa20■□□□□ 0.79
PKNOX2-207ENST00000532623 PPIP5K2O43314 1243 aa20■□□□□ 0.79
PKNOX2-207ENST00000532623 ITGA6P23229 1130 aa20■□□□□ 0.79
PKNOX2-207ENST00000532623 GPSM2P81274 684 aa20■□□□□ 0.79
PKNOX2-207ENST00000532623 AOC3Q16853 763 aa20■□□□□ 0.79
PKNOX2-207ENST00000532623 SUPT20HQ8NEM7 779 aa20■□□□□ 0.79
PKNOX2-207ENST00000532623 RTFDC1Q9BY42 306 aaPredicted RBP20■□□□□ 0.79
PKNOX2-207ENST00000532623 DPY19L2Q6NUT2 758 aa20■□□□□ 0.79
PKNOX2-207ENST00000532623 LMBR1LQ6UX01 489 aa20■□□□□ 0.79
PKNOX2-207ENST00000532623 JDP2Q8WYK2 163 aa20■□□□□ 0.79
PKNOX2-207ENST00000532623 SUCLG2Q96I99 432 aa20■□□□□ 0.79
PKNOX2-207ENST00000532623 COL4A5P29400 1685 aa19.99■□□□□ 0.79
PKNOX2-207ENST00000532623 UTYO14607 1347 aa19.99■□□□□ 0.79
PKNOX2-207ENST00000532623 CCT4P50991 539 aaKnown RBP19.99■□□□□ 0.79
PKNOX2-207ENST00000532623 SPEF2Q9C093 1822 aa19.98■□□□□ 0.79
PKNOX2-207ENST00000532623 DUOX1Q9NRD9 1551 aa19.98■□□□□ 0.79
PKNOX2-207ENST00000532623 ARHGAP45Q92619 1136 aa19.98■□□□□ 0.79
PKNOX2-207ENST00000532623 USP44Q9H0E7 712 aa19.98■□□□□ 0.79
PKNOX2-207ENST00000532623 RRAGCQ9HB90 399 aa19.98■□□□□ 0.79
PKNOX2-207ENST00000532623 C6orf229H3BNL8 230 aa19.97■□□□□ 0.79
PKNOX2-207ENST00000532623 IPO8O15397 1037 aaKnown RBP19.97■□□□□ 0.79
PKNOX2-207ENST00000532623 DDNO94850 711 aaPredicted RBP19.97■□□□□ 0.79
PKNOX2-207ENST00000532623 IGHMBP2P38935 993 aaKnown RBP19.97■□□□□ 0.79
PKNOX2-207ENST00000532623 KAZALD1Q96I82 304 aa19.97■□□□□ 0.79
PKNOX2-207ENST00000532623 ANKIB1Q9P2G1 1089 aa19.97■□□□□ 0.79
PKNOX2-207ENST00000532623 POLLQ9UGP5 575 aa19.97■□□□□ 0.79
PKNOX2-207ENST00000532623 TNNQ9UQP3 1299 aa19.97■□□□□ 0.79
PKNOX2-207ENST00000532623 ZNF541Q9H0D2 1346 aa19.97■□□□□ 0.79
PKNOX2-207ENST00000532623 ANKRD18BA2A2Z9 1011 aa19.97■□□□□ 0.79
PKNOX2-207ENST00000532623 KIF3CO14782 793 aa19.97■□□□□ 0.79
PKNOX2-207ENST00000532623 IFIT5Q13325 482 aaKnown RBP19.97■□□□□ 0.79
PKNOX2-207ENST00000532623 BSDC1Q9NW68 430 aaPredicted RBP19.97■□□□□ 0.79
PKNOX2-207ENST00000532623 SUPT16HQ9Y5B9 1047 aaKnown RBP19.97■□□□□ 0.79
PKNOX2-207ENST00000532623 FZD9O00144 591 aa19.96■□□□□ 0.79
PKNOX2-207ENST00000532623 TRIM27P14373 513 aa19.96■□□□□ 0.79
PKNOX2-207ENST00000532623 ATF7IPQ6VMQ6 1270 aa19.96■□□□□ 0.79
PKNOX2-207ENST00000532623 NIM1KQ8IY84 436 aa19.96■□□□□ 0.79
PKNOX2-207ENST00000532623 TBC1D16Q8TBP0 767 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms