RNA–Protein interactions for RNA: ENST00000532475.1

NUP98-219, Transcript of nucleoporin 98, humanhuman

TSL 4

Gene NUP98, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-219ENST00000532475 LARGE2Q8N3Y3 721 aa11.08□□□□□ -0.64
NUP98-219ENST00000532475 CCDC82Q8N4S0 544 aa11.08□□□□□ -0.64
NUP98-219ENST00000532475 KCTD17Q8N5Z5 321 aa11.08□□□□□ -0.64
NUP98-219ENST00000532475 SNED1Q8TER0 1413 aa11.08□□□□□ -0.64
NUP98-219ENST00000532475 UBR2Q8IWV8 1755 aa11.08□□□□□ -0.64
NUP98-219ENST00000532475 GTF2E1P29083 439 aaPredicted RBP11.07□□□□□ -0.64
NUP98-219ENST00000532475 CNGB1Q14028 1251 aaPredicted RBP11.07□□□□□ -0.64
NUP98-219ENST00000532475 CRY2Q49AN0 593 aa11.07□□□□□ -0.64
NUP98-219ENST00000532475 CC2D1BQ5T0F9 858 aaKnown RBP11.07□□□□□ -0.64
NUP98-219ENST00000532475 CIAPIN1Q6FI81 312 aa11.07□□□□□ -0.64
NUP98-219ENST00000532475 RASEFQ8IZ41 740 aa11.07□□□□□ -0.64
NUP98-219ENST00000532475 GLIS2Q9BZE0 524 aaPredicted RBP11.07□□□□□ -0.64
NUP98-219ENST00000532475 ZNF652Q9Y2D9 606 aa11.07□□□□□ -0.64
NUP98-219ENST00000532475 LTBP1Q14766 1721 aa11.06□□□□□ -0.64
NUP98-219ENST00000532475 ZNF316A6NFI3 1004 aaPredicted RBP11.06□□□□□ -0.64
NUP98-219ENST00000532475 TRIM66O15016 1216 aa11.06□□□□□ -0.64
NUP98-219ENST00000532475 SNRPA1P09661 255 aaKnown RBP11.06□□□□□ -0.64
NUP98-219ENST00000532475 HIRAP54198 1017 aaPredicted RBP11.06□□□□□ -0.64
NUP98-219ENST00000532475 GAS2L2Q8NHY3 880 aa11.06□□□□□ -0.64
NUP98-219ENST00000532475 CEMIPQ8WUJ3 1361 aa11.05□□□□□ -0.64
NUP98-219ENST00000532475 SCN7AQ01118 1682 aa11.05□□□□□ -0.64
NUP98-219ENST00000532475 PER1O15534 1290 aaPredicted RBP11.05□□□□□ -0.64
NUP98-219ENST00000532475 CXCL9Q07325 125 aa11.05□□□□□ -0.64
NUP98-219ENST00000532475 C3orf67Q6ZVT6 689 aa11.05□□□□□ -0.64
NUP98-219ENST00000532475 NGEFQ8N5V2 710 aa11.05□□□□□ -0.64
NUP98-219ENST00000532475 ZNF408Q9H9D4 720 aa11.05□□□□□ -0.64
NUP98-219ENST00000532475 GPRC5DQ9NZD1 345 aa11.05□□□□□ -0.64
NUP98-219ENST00000532475 ABCC12Q96J65 1359 aa11.04□□□□□ -0.64
NUP98-219ENST00000532475 CA12O43570 354 aa11.04□□□□□ -0.64
NUP98-219ENST00000532475 HOXA10P31260 410 aaPredicted RBP11.04□□□□□ -0.64
NUP98-219ENST00000532475 DCTN1Q14203 1278 aa11.04□□□□□ -0.64
NUP98-219ENST00000532475 AOC3Q16853 763 aa11.04□□□□□ -0.64
NUP98-219ENST00000532475 CC2D2BQ6DHV5 1058 aa11.04□□□□□ -0.64
NUP98-219ENST00000532475 MCM10Q7L590 875 aa11.04□□□□□ -0.64
NUP98-219ENST00000532475 ZNF467Q7Z7K2 595 aaPredicted RBP11.04□□□□□ -0.64
NUP98-219ENST00000532475 MIS18AQ9NYP9 233 aa11.04□□□□□ -0.64
NUP98-219ENST00000532475 SHTN1A0MZ66 631 aa11.03□□□□□ -0.64
NUP98-219ENST00000532475 GMPSP49915 693 aaPredicted RBP11.03□□□□□ -0.64
NUP98-219ENST00000532475 SOX10P56693 466 aa11.03□□□□□ -0.64
NUP98-219ENST00000532475 MFRPQ9BY79 579 aa11.03□□□□□ -0.64
NUP98-219ENST00000532475 ADARB2Q9NS39 739 aaKnown RBP11.03□□□□□ -0.64
NUP98-219ENST00000532475 PGAP2Q9UHJ9 254 aa11.03□□□□□ -0.64
NUP98-219ENST00000532475 PPIP5K2O43314 1243 aa11.02□□□□□ -0.65
NUP98-219ENST00000532475 GPTP24298 496 aa11.02□□□□□ -0.65
NUP98-219ENST00000532475 PRKAR2BP31323 418 aa11.02□□□□□ -0.65
NUP98-219ENST00000532475 SUSD4Q5VX71 490 aa11.02□□□□□ -0.65
NUP98-219ENST00000532475 TTLL7Q6ZT98 887 aa11.02□□□□□ -0.65
NUP98-219ENST00000532475 NIM1KQ8IY84 436 aa11.02□□□□□ -0.65
NUP98-219ENST00000532475 RPGRQ92834 1020 aaKnown RBP11.02□□□□□ -0.65
NUP98-219ENST00000532475 HHIPL1Q96JK4 782 aa11.02□□□□□ -0.65
NUP98-219ENST00000532475 ARFGEF2Q9Y6D5 1785 aa11.02□□□□□ -0.65
NUP98-219ENST00000532475 PPEF1O14829 653 aaPredicted RBP11.01□□□□□ -0.65
NUP98-219ENST00000532475 PDAP1Q13442 181 aaKnown RBP11.01□□□□□ -0.65
NUP98-219ENST00000532475 USP48Q86UV5 1035 aa11.01□□□□□ -0.65
NUP98-219ENST00000532475 TRPM4Q8TD43 1214 aa11.01□□□□□ -0.65
NUP98-219ENST00000532475 DDRGK1Q96HY6 314 aa11.01□□□□□ -0.65
NUP98-219ENST00000532475 CRAMP1Q96RY5 1269 aa11.01□□□□□ -0.65
NUP98-219ENST00000532475 ZNRF3Q9ULT6 936 aa11.01□□□□□ -0.65
NUP98-219ENST00000532475 NPC1L1Q9UHC9 1359 aa11.01□□□□□ -0.65
NUP98-219ENST00000532475 THSD7BQ9C0I4 1608 aa11□□□□□ -0.65
NUP98-219ENST00000532475 RAD17O75943 681 aa11□□□□□ -0.65
NUP98-219ENST00000532475 HUNKP57058 714 aa11□□□□□ -0.65
NUP98-219ENST00000532475 RBM26Q5T8P6 1007 aaKnown RBP11□□□□□ -0.65
NUP98-219ENST00000532475 CDC37L1Q7L3B6 337 aa11□□□□□ -0.65
NUP98-219ENST00000532475 RBM17Q96I25 401 aaKnown RBP11□□□□□ -0.65
NUP98-219ENST00000532475 RRP7AQ9Y3A4 280 aaKnown RBP11□□□□□ -0.65
NUP98-219ENST00000532475 UBN2Q6ZU65 1347 aa11□□□□□ -0.65
NUP98-219ENST00000532475 FAM155AB1AL88 458 aaPredicted RBP10.99□□□□□ -0.65
NUP98-219ENST00000532475 ERVV-1B6SEH8 477 aa10.99□□□□□ -0.65
NUP98-219ENST00000532475 RAD21O60216 631 aa10.99□□□□□ -0.65
NUP98-219ENST00000532475 KIF23Q02241 960 aaPredicted RBP10.99□□□□□ -0.65
NUP98-219ENST00000532475 NOGQ13253 232 aa10.99□□□□□ -0.65
NUP98-219ENST00000532475 GRIPAP1Q4V328 841 aa10.99□□□□□ -0.65
NUP98-219ENST00000532475 FAM117AQ9C073 453 aa10.99□□□□□ -0.65
NUP98-219ENST00000532475 NYXQ9GZU5 481 aa10.99□□□□□ -0.65
NUP98-219ENST00000532475 ZBTB3Q9H5J0 574 aa10.99□□□□□ -0.65
NUP98-219ENST00000532475 CNOT7Q9UIV1 285 aaKnown RBP10.99□□□□□ -0.65
NUP98-219ENST00000532475 ATP6V0A2Q9Y487 856 aa10.99□□□□□ -0.65
NUP98-219ENST00000532475 MKI67P46013 3256 aaKnown RBP10.99□□□□□ -0.65
NUP98-219ENST00000532475 BCORQ6W2J9 1755 aa10.98□□□□□ -0.65
NUP98-219ENST00000532475 A6NJR5 290 aa10.98□□□□□ -0.65
NUP98-219ENST00000532475 TRPA1O75762 1119 aa10.98□□□□□ -0.65
NUP98-219ENST00000532475 MYL6BP14649 208 aa10.98□□□□□ -0.65
NUP98-219ENST00000532475 ZNF34Q8IZ26 560 aa10.98□□□□□ -0.65
NUP98-219ENST00000532475 RTF1Q92541 710 aaKnown RBP10.98□□□□□ -0.65
NUP98-219ENST00000532475 TRAIPQ9BWF2 469 aa10.98□□□□□ -0.65
NUP98-219ENST00000532475 BCL2L13Q9BXK5 485 aa10.98□□□□□ -0.65
NUP98-219ENST00000532475 RNF186Q9NXI6 227 aa10.98□□□□□ -0.65
NUP98-219ENST00000532475 KIF7Q2M1P5 1343 aa10.98□□□□□ -0.65
NUP98-219ENST00000532475 SIPA1L3O60292 1781 aaPredicted RBP10.98□□□□□ -0.65
NUP98-219ENST00000532475 YDJCA8MPS7 323 aa10.97□□□□□ -0.65
NUP98-219ENST00000532475 NTSR2O95665 410 aa10.97□□□□□ -0.65
NUP98-219ENST00000532475 EGFRP00533 1210 aa10.97□□□□□ -0.65
NUP98-219ENST00000532475 DSG3P32926 999 aa10.97□□□□□ -0.65
NUP98-219ENST00000532475 TAF7Q15545 349 aaPredicted RBP10.97□□□□□ -0.65
NUP98-219ENST00000532475 SAMD7Q7Z3H4 446 aa10.97□□□□□ -0.65
NUP98-219ENST00000532475 RTFDC1Q9BY42 306 aaPredicted RBP10.97□□□□□ -0.65
NUP98-219ENST00000532475 PCGF6Q9BYE7 350 aa10.97□□□□□ -0.65
NUP98-219ENST00000532475 MAP3K15Q6ZN16 1313 aa10.97□□□□□ -0.65
NUP98-219ENST00000532475 COL3A1P02461 1466 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms