RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 PPIP5K2O43314 1243 aa9.36□□□□□ -0.91
CTNND1-230ENST00000532245 NLGN1Q8N2Q7 840 aa9.36□□□□□ -0.91
CTNND1-230ENST00000532245 TRIM35Q9UPQ4 493 aa9.36□□□□□ -0.91
CTNND1-230ENST00000532245 PRKG1Q13976 671 aa9.36□□□□□ -0.91
CTNND1-230ENST00000532245 RAB11FIP4Q86YS3 637 aa9.36□□□□□ -0.91
CTNND1-230ENST00000532245 NIM1KQ8IY84 436 aa9.36□□□□□ -0.91
CTNND1-230ENST00000532245 WASF1Q92558 559 aa9.36□□□□□ -0.91
CTNND1-230ENST00000532245 MAGEB6P1A0A0J9YX57 407 aa9.35□□□□□ -0.91
CTNND1-230ENST00000532245 HIBADHP31937 336 aaKnown RBP9.35□□□□□ -0.91
CTNND1-230ENST00000532245 MAGEB6Q8N7X4 407 aa9.35□□□□□ -0.91
CTNND1-230ENST00000532245 SCLT1Q96NL6 688 aa9.35□□□□□ -0.91
CTNND1-230ENST00000532245 SKOR2Q2VWA4 1001 aaPredicted RBP9.35□□□□□ -0.91
CTNND1-230ENST00000532245 TTLL7Q6ZT98 887 aa9.35□□□□□ -0.91
CTNND1-230ENST00000532245 TRMT1LQ7Z2T5 733 aaKnown RBP9.35□□□□□ -0.91
CTNND1-230ENST00000532245 MPNDQ8N594 471 aa9.35□□□□□ -0.91
CTNND1-230ENST00000532245 JCADQ9P266 1359 aa9.35□□□□□ -0.91
CTNND1-230ENST00000532245 HOXB7P09629 217 aa9.35□□□□□ -0.91
CTNND1-230ENST00000532245 TMEM67Q5HYA8 995 aa9.35□□□□□ -0.91
CTNND1-230ENST00000532245 LARP6Q9BRS8 491 aaKnown RBP9.35□□□□□ -0.91
CTNND1-230ENST00000532245 THRAP3Q9Y2W1 955 aaKnown RBP9.35□□□□□ -0.91
CTNND1-230ENST00000532245 GOLGA8AA7E2F4 631 aa9.34□□□□□ -0.91
CTNND1-230ENST00000532245 GOLGA8BA8MQT2 603 aa9.34□□□□□ -0.91
CTNND1-230ENST00000532245 ME1P48163 572 aa9.34□□□□□ -0.91
CTNND1-230ENST00000532245 OLFM4Q6UX06 510 aa9.34□□□□□ -0.91
CTNND1-230ENST00000532245 ANKRD44Q8N8A2 993 aa9.34□□□□□ -0.91
CTNND1-230ENST00000532245 PAG1Q9NWQ8 432 aa9.34□□□□□ -0.91
CTNND1-230ENST00000532245 CLTCQ00610 1675 aaKnown RBP9.34□□□□□ -0.91
CTNND1-230ENST00000532245 CCDC196A0A1B0GTZ2 297 aa9.34□□□□□ -0.91
CTNND1-230ENST00000532245 GIGYF1O75420 1035 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-230ENST00000532245 TNIP1Q15025 636 aa9.34□□□□□ -0.91
CTNND1-230ENST00000532245 GJD4Q96KN9 370 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-230ENST00000532245 MCM9Q9NXL9 1143 aa9.34□□□□□ -0.91
CTNND1-230ENST00000532245 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.34□□□□□ -0.91
CTNND1-230ENST00000532245 TNNI2P48788 182 aa9.34□□□□□ -0.91
CTNND1-230ENST00000532245 PLS1Q14651 629 aa9.34□□□□□ -0.91
CTNND1-230ENST00000532245 HOMER1Q86YM7 354 aa9.34□□□□□ -0.91
CTNND1-230ENST00000532245 JMYQ8N9B5 988 aa9.34□□□□□ -0.91
CTNND1-230ENST00000532245 SUPT20HQ8NEM7 779 aa9.34□□□□□ -0.91
CTNND1-230ENST00000532245 ZSCAN31Q96LW9 406 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-230ENST00000532245 RTN4Q9NQC3 1192 aaKnown RBP9.34□□□□□ -0.91
CTNND1-230ENST00000532245 NPC1L1Q9UHC9 1359 aa9.34□□□□□ -0.91
CTNND1-230ENST00000532245 ANKARQ7Z5J8 1434 aa9.34□□□□□ -0.91
CTNND1-230ENST00000532245 PLA2R1Q13018 1463 aa9.34□□□□□ -0.91
CTNND1-230ENST00000532245 SOS1Q07889 1333 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-230ENST00000532245 PPFIA3O75145 1194 aa9.34□□□□□ -0.91
CTNND1-230ENST00000532245 TIMM10P62072 90 aa9.34□□□□□ -0.91
CTNND1-230ENST00000532245 CCT2P78371 535 aaKnown RBP9.34□□□□□ -0.91
CTNND1-230ENST00000532245 CCDC83Q8IWF9 413 aa9.34□□□□□ -0.91
CTNND1-230ENST00000532245 KDM5AP29375 1690 aaKnown RBP9.34□□□□□ -0.91
CTNND1-230ENST00000532245 KINO60870 393 aaKnown RBP9.34□□□□□ -0.92
CTNND1-230ENST00000532245 MATR3P43243 847 aaKnown RBP eCLIP9.33□□□□□ -0.926e-7■■■■□ 22.1
CTNND1-230ENST00000532245 TCIRG1Q13488 830 aa9.33□□□□□ -0.92
CTNND1-230ENST00000532245 ZNF526Q8TF50 670 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-230ENST00000532245 ZBTB1Q9Y2K1 713 aa9.33□□□□□ -0.92
CTNND1-230ENST00000532245 ATP7BP35670 1465 aa9.33□□□□□ -0.92
CTNND1-230ENST00000532245 NAP1L5Q96NT1 182 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-230ENST00000532245 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.33□□□□□ -0.929e-8■□□□□ 10.6
CTNND1-230ENST00000532245 EYA2O00167 538 aa9.33□□□□□ -0.92
CTNND1-230ENST00000532245 IGHDP01880 384 aa9.33□□□□□ -0.92
CTNND1-230ENST00000532245 ZFYP08048 801 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-230ENST00000532245 MICU3Q86XE3 530 aa9.33□□□□□ -0.92
CTNND1-230ENST00000532245 SBNO2Q9Y2G9 1366 aa9.33□□□□□ -0.92
CTNND1-230ENST00000532245 DENND2AQ9ULE3 1009 aa9.33□□□□□ -0.92
CTNND1-230ENST00000532245 HMGB1P09429 215 aaKnown RBP9.32□□□□□ -0.92
CTNND1-230ENST00000532245 GUCY1B3Q02153 619 aa9.32□□□□□ -0.92
CTNND1-230ENST00000532245 PUM3Q15397 648 aaKnown RBP9.32□□□□□ -0.92
CTNND1-230ENST00000532245 DPY19L2Q6NUT2 758 aa9.32□□□□□ -0.92
CTNND1-230ENST00000532245 SAP30BPQ9UHR5 308 aaKnown RBP9.32□□□□□ -0.92
CTNND1-230ENST00000532245 CDC42BPBQ9Y5S2 1711 aa9.32□□□□□ -0.92
CTNND1-230ENST00000532245 K7ELQ4 463 aaPredicted RBP9.32□□□□□ -0.92
CTNND1-230ENST00000532245 PLCG2P16885 1265 aa9.32□□□□□ -0.92
CTNND1-230ENST00000532245 GCKRQ14397 625 aa9.32□□□□□ -0.92
CTNND1-230ENST00000532245 CEP85Q6P2H3 762 aa9.32□□□□□ -0.92
CTNND1-230ENST00000532245 PIGBQ92521 554 aa9.32□□□□□ -0.92
CTNND1-230ENST00000532245 AXIN2Q9Y2T1 843 aa9.32□□□□□ -0.92
CTNND1-230ENST00000532245 A0A1B0GUL7 405 aa9.32□□□□□ -0.92
CTNND1-230ENST00000532245 KDM4FA0A1W2PPD8 638 aa9.32□□□□□ -0.92
CTNND1-230ENST00000532245 NLRP5P59047 1200 aa9.32□□□□□ -0.92
CTNND1-230ENST00000532245 DIP2CQ9Y2E4 1556 aa9.32□□□□□ -0.92
CTNND1-230ENST00000532245 IPO7O95373 1038 aaKnown RBP9.32□□□□□ -0.92
CTNND1-230ENST00000532245 RPS8P62241 208 aaKnown RBP9.32□□□□□ -0.92
CTNND1-230ENST00000532245 NCOA7Q8NI08 942 aa9.32□□□□□ -0.92
CTNND1-230ENST00000532245 SUCLG2Q96I99 432 aa9.32□□□□□ -0.92
CTNND1-230ENST00000532245 ADGRB3O60242 1522 aa9.32□□□□□ -0.92
CTNND1-230ENST00000532245 RLBP1P12271 317 aa9.31□□□□□ -0.92
CTNND1-230ENST00000532245 KIF5BP33176 963 aa9.31□□□□□ -0.92
CTNND1-230ENST00000532245 EN1Q05925 392 aaPredicted RBP9.31□□□□□ -0.92
CTNND1-230ENST00000532245 RTL1A6NKG5 1358 aa9.31□□□□□ -0.92
CTNND1-230ENST00000532245 TNS3Q68CZ2 1445 aa9.31□□□□□ -0.92
CTNND1-230ENST00000532245 SSRP1Q08945 709 aaKnown RBP9.31□□□□□ -0.92
CTNND1-230ENST00000532245 PCDHB15Q9Y5E8 787 aa9.31□□□□□ -0.92
CTNND1-230ENST00000532245 TTC22Q5TAA0 569 aa9.31□□□□□ -0.92
CTNND1-230ENST00000532245 TEX11Q8IYF3 940 aa9.31□□□□□ -0.92
CTNND1-230ENST00000532245 DIP2BQ9P265 1576 aa9.31□□□□□ -0.92
CTNND1-230ENST00000532245 ZBTB7AO95365 584 aa9.31□□□□□ -0.92
CTNND1-230ENST00000532245 SERPINB2P05120 415 aa9.31□□□□□ -0.92
CTNND1-230ENST00000532245 PDE1AP54750 535 aa9.31□□□□□ -0.92
CTNND1-230ENST00000532245 FERMT3Q86UX7 667 aa9.31□□□□□ -0.92
CTNND1-230ENST00000532245 KRI1Q8N9T8 703 aaKnown RBP9.31□□□□□ -0.92
CTNND1-230ENST00000532245 BMP2KQ9NSY1 1161 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms