RNA–Protein interactions for RNA: ENST00000532225.5

NFRKB-211, Transcript of nuclear factor related to kappaB binding protein, humanhuman

TSL 5

Gene NFRKB, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFRKB-211ENST00000532225 CDHR2Q9BYE9 1310 aa29.32■■■□□ 2.28
NFRKB-211ENST00000532225 F6X3S4 739 aa29.32■■■□□ 2.28
NFRKB-211ENST00000532225 GCKRQ14397 625 aa29.32■■■□□ 2.28
NFRKB-211ENST00000532225 CCDC152Q4G0S7 254 aa29.32■■■□□ 2.28
NFRKB-211ENST00000532225 HNRNPUQ00839 825 aaKnown RBP eCLIP29.31■■■□□ 2.28
NFRKB-211ENST00000532225 DICER1Q9UPY3 1922 aaKnown RBP29.3■■■□□ 2.28
NFRKB-211ENST00000532225 GLTPD2A6NH11 291 aa29.3■■■□□ 2.28
NFRKB-211ENST00000532225 MRPL50Q8N5N7 158 aaKnown RBP29.3■■■□□ 2.28
NFRKB-211ENST00000532225 H7C1W4 665 aa29.29■■■□□ 2.28
NFRKB-211ENST00000532225 CT47B1P0C2W7 299 aaPredicted RBP29.29■■■□□ 2.28
NFRKB-211ENST00000532225 IARSP41252 1262 aaKnown RBP29.29■■■□□ 2.28
NFRKB-211ENST00000532225 UBE3BQ7Z3V4 1068 aa29.29■■■□□ 2.28
NFRKB-211ENST00000532225 SLC4A10Q6U841 1118 aa29.28■■■□□ 2.28
NFRKB-211ENST00000532225 MPNDQ8N594 471 aa29.28■■■□□ 2.28
NFRKB-211ENST00000532225 SSH1Q8WYL5 1049 aa29.28■■■□□ 2.28
NFRKB-211ENST00000532225 RPS8P62241 208 aaKnown RBP29.27■■■□□ 2.28
NFRKB-211ENST00000532225 ALDH1L2Q3SY69 923 aa29.27■■■□□ 2.28
NFRKB-211ENST00000532225 DPP8Q6V1X1 898 aaPredicted RBP29.27■■■□□ 2.28
NFRKB-211ENST00000532225 SUPT20HQ8NEM7 779 aa29.27■■■□□ 2.28
NFRKB-211ENST00000532225 JDP2Q8WYK2 163 aa29.27■■■□□ 2.28
NFRKB-211ENST00000532225 CELF1Q92879 486 aaKnown RBP29.27■■■□□ 2.28
NFRKB-211ENST00000532225 NMRK2Q9NPI5 230 aa29.27■■■□□ 2.28
NFRKB-211ENST00000532225 TAF1P21675 1872 aa29.27■■■□□ 2.28
NFRKB-211ENST00000532225 C1QTNF8P60827 252 aa29.26■■■□□ 2.27
NFRKB-211ENST00000532225 BEND3Q5T5X7 828 aa29.26■■■□□ 2.27
NFRKB-211ENST00000532225 CCDC85AQ96PX6 553 aaPredicted RBP29.26■■■□□ 2.27
NFRKB-211ENST00000532225 RRAGCQ9HB90 399 aa29.26■■■□□ 2.27
NFRKB-211ENST00000532225 TIAM2Q8IVF5 1701 aa29.25■■■□□ 2.27
NFRKB-211ENST00000532225 CTSWP56202 376 aa29.25■■■□□ 2.27
NFRKB-211ENST00000532225 C16orf71Q8IYS4 520 aaPredicted RBP29.25■■■□□ 2.27
NFRKB-211ENST00000532225 KIF3CO14782 793 aa29.24■■■□□ 2.27
NFRKB-211ENST00000532225 LARGE2Q8N3Y3 721 aa29.24■■■□□ 2.27
NFRKB-211ENST00000532225 BCL2L13Q9BXK5 485 aa29.24■■■□□ 2.27
NFRKB-211ENST00000532225 SEC31BQ9NQW1 1179 aa29.24■■■□□ 2.27
NFRKB-211ENST00000532225 SMC4Q9NTJ3 1288 aa29.24■■■□□ 2.27
NFRKB-211ENST00000532225 PTPRCP08575 1304 aa29.23■■■□□ 2.27
NFRKB-211ENST00000532225 VPS33BQ9H267 617 aa29.23■■■□□ 2.27
NFRKB-211ENST00000532225 SNED1Q8TER0 1413 aa29.22■■■□□ 2.27
NFRKB-211ENST00000532225 SLC51AQ86UW1 340 aa29.22■■■□□ 2.27
NFRKB-211ENST00000532225 TTLL11Q8NHH1 800 aa29.22■■■□□ 2.27
NFRKB-211ENST00000532225 SRCIN1Q9C0H9 1055 aa29.22■■■□□ 2.27
NFRKB-211ENST00000532225 ALDH1L1O75891 902 aa29.21■■■□□ 2.27
NFRKB-211ENST00000532225 ANKRD18AQ8IVF6 992 aa29.21■■■□□ 2.27
NFRKB-211ENST00000532225 CDC5LQ99459 802 aaKnown RBP29.21■■■□□ 2.27
NFRKB-211ENST00000532225 C9orf78Q9NZ63 289 aaPredicted RBP29.21■■■□□ 2.27
NFRKB-211ENST00000532225 PPIP5K2O43314 1243 aa29.2■■■□□ 2.26
NFRKB-211ENST00000532225 VEGFAP15692 232 aaPredicted RBP29.2■■■□□ 2.26
NFRKB-211ENST00000532225 PLA2G12BQ9BX93 195 aa29.2■■■□□ 2.26
NFRKB-211ENST00000532225 RTFDC1Q9BY42 306 aaPredicted RBP29.2■■■□□ 2.26
NFRKB-211ENST00000532225 NSFL1CQ9UNZ2 370 aaKnown RBP29.2■■■□□ 2.26
NFRKB-211ENST00000532225 CASP7P55210 303 aa29.18■■■□□ 2.26
NFRKB-211ENST00000532225 EIF6P56537 245 aaKnown RBP29.18■■■□□ 2.26
NFRKB-211ENST00000532225 NIM1KQ8IY84 436 aa29.18■■■□□ 2.26
NFRKB-211ENST00000532225 MYH3P11055 1940 aa29.18■■■□□ 2.26
NFRKB-211ENST00000532225 GRM8O00222 908 aa29.17■■■□□ 2.26
NFRKB-211ENST00000532225 TOMM70O94826 608 aa29.17■■■□□ 2.26
NFRKB-211ENST00000532225 DDNO94850 711 aaPredicted RBP29.17■■■□□ 2.26
NFRKB-211ENST00000532225 AOC3Q16853 763 aa29.17■■■□□ 2.26
NFRKB-211ENST00000532225 GREM2Q9H772 168 aa29.17■■■□□ 2.26
NFRKB-211ENST00000532225 FZD9O00144 591 aa29.16■■■□□ 2.26
NFRKB-211ENST00000532225 C6orf229H3BNL8 230 aa29.15■■■□□ 2.26
NFRKB-211ENST00000532225 GPSM2P81274 684 aa29.15■■■□□ 2.26
NFRKB-211ENST00000532225 ANKIB1Q9P2G1 1089 aa29.14■■■□□ 2.26
NFRKB-211ENST00000532225 RTL9Q8NET4 1388 aa29.13■■■□□ 2.25
NFRKB-211ENST00000532225 CSF1RP07333 972 aa29.13■■■□□ 2.25
NFRKB-211ENST00000532225 IGHMBP2P38935 993 aaKnown RBP29.13■■■□□ 2.25
NFRKB-211ENST00000532225 EYA3Q99504 573 aa29.13■■■□□ 2.25
NFRKB-211ENST00000532225 ZNF541Q9H0D2 1346 aa29.13■■■□□ 2.25
NFRKB-211ENST00000532225 RARSP54136 660 aaKnown RBP29.12■■■□□ 2.25
NFRKB-211ENST00000532225 KIAA2012Q0VF49 1180 aa29.12■■■□□ 2.25
NFRKB-211ENST00000532225 WASHC4Q2M389 1173 aa29.12■■■□□ 2.25
NFRKB-211ENST00000532225 NOB1Q9ULX3 412 aaKnown RBP29.12■■■□□ 2.25
NFRKB-211ENST00000532225 CHMP3Q9Y3E7 222 aa29.12■■■□□ 2.25
NFRKB-211ENST00000532225 ITGA6P23229 1130 aa29.11■■■□□ 2.25
NFRKB-211ENST00000532225 BRPF1P55201 1214 aaPredicted RBP29.11■■■□□ 2.25
NFRKB-211ENST00000532225 BSDC1Q9NW68 430 aaPredicted RBP29.11■■■□□ 2.25
NFRKB-211ENST00000532225 ANKRD18BA2A2Z9 1011 aa29.1■■■□□ 2.25
NFRKB-211ENST00000532225 IQCA1LA6NCM1 817 aa29.1■■■□□ 2.25
NFRKB-211ENST00000532225 GPC2Q8N158 579 aa29.1■■■□□ 2.25
NFRKB-211ENST00000532225 RBM46Q8TBY0 533 aaKnown RBP29.1■■■□□ 2.25
NFRKB-211ENST00000532225 API5Q9BZZ5 524 aaKnown RBP29.1■■■□□ 2.25
NFRKB-211ENST00000532225 ZNRF3Q9ULT6 936 aa29.1■■■□□ 2.25
NFRKB-211ENST00000532225 GJA3Q9Y6H8 435 aa29.1■■■□□ 2.25
NFRKB-211ENST00000532225 LRRC37AA6NMS7 1700 aa29.1■■■□□ 2.25
NFRKB-211ENST00000532225 WDR90Q96KV7 1748 aa29.09■■■□□ 2.25
NFRKB-211ENST00000532225 FOXO4P98177 505 aa29.09■■■□□ 2.25
NFRKB-211ENST00000532225 FAM161AQ3B820 660 aa29.09■■■□□ 2.25
NFRKB-211ENST00000532225 TBC1D16Q8TBP0 767 aa29.09■■■□□ 2.25
NFRKB-211ENST00000532225 MPHOSPH8Q99549 860 aa29.09■■■□□ 2.25
NFRKB-211ENST00000532225 PODXL2Q9NZ53 605 aa29.09■■■□□ 2.25
NFRKB-211ENST00000532225 POLLQ9UGP5 575 aa29.09■■■□□ 2.25
NFRKB-211ENST00000532225 GGA1Q9UJY5 639 aa29.09■■■□□ 2.25
NFRKB-211ENST00000532225 ZBED9Q6R2W3 1325 aa29.09■■■□□ 2.25
NFRKB-211ENST00000532225 COL4A1P02462 1669 aa29.09■■■□□ 2.25
NFRKB-211ENST00000532225 POTECB2RU33 542 aa29.08■■■□□ 2.25
NFRKB-211ENST00000532225 RIMBP2O15034 1052 aa29.08■■■□□ 2.25
NFRKB-211ENST00000532225 IFIT5Q13325 482 aaKnown RBP29.08■■■□□ 2.25
NFRKB-211ENST00000532225 ZC3H12CQ9C0D7 883 aaKnown RBP29.08■■■□□ 2.25
NFRKB-211ENST00000532225 G3V3G9 751 aa29.07■■■□□ 2.24
NFRKB-211ENST00000532225 UFL1O94874 794 aa29.07■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms