RNA–Protein interactions for RNA: ENST00000531226.5

PACSIN3-208, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-208ENST00000531226 UBE3BQ7Z3V4 1068 aa24.14■■□□□ 1.45
PACSIN3-208ENST00000531226 GRAPQ13588 217 aa24.13■■□□□ 1.45
PACSIN3-208ENST00000531226 GRAPLQ8TC17 118 aaPredicted RBP24.13■■□□□ 1.45
PACSIN3-208ENST00000531226 ALDH1L1O75891 902 aa24.12■■□□□ 1.45
PACSIN3-208ENST00000531226 CASP7P55210 303 aa24.12■■□□□ 1.45
PACSIN3-208ENST00000531226 C9orf131Q5VYM1 1079 aa24.12■■□□□ 1.45
PACSIN3-208ENST00000531226 CC2D2BQ6DHV5 1058 aa24.12■■□□□ 1.45
PACSIN3-208ENST00000531226 OLFM4Q6UX06 510 aa24.12■■□□□ 1.45
PACSIN3-208ENST00000531226 SRCIN1Q9C0H9 1055 aa24.12■■□□□ 1.45
PACSIN3-208ENST00000531226 TAOK3Q9H2K8 898 aa24.12■■□□□ 1.45
PACSIN3-208ENST00000531226 KIF16BQ96L93 1317 aa24.1■■□□□ 1.45
PACSIN3-208ENST00000531226 BBOX1O75936 387 aa24.1■■□□□ 1.45
PACSIN3-208ENST00000531226 LMNB1P20700 586 aa24.1■■□□□ 1.45
PACSIN3-208ENST00000531226 PRELPP51888 382 aa24.1■■□□□ 1.45
PACSIN3-208ENST00000531226 CTSWP56202 376 aa24.1■■□□□ 1.45
PACSIN3-208ENST00000531226 CCDC152Q4G0S7 254 aa24.1■■□□□ 1.45
PACSIN3-208ENST00000531226 RTKN2Q8IZC4 609 aa24.1■■□□□ 1.45
PACSIN3-208ENST00000531226 PLA2G12BQ9BX93 195 aa24.1■■□□□ 1.45
PACSIN3-208ENST00000531226 RNF181Q9P0P0 153 aa24.1■■□□□ 1.45
PACSIN3-208ENST00000531226 NOB1Q9ULX3 412 aaKnown RBP24.1■■□□□ 1.45
PACSIN3-208ENST00000531226 ATP6V0A2Q9Y487 856 aa24.09■■□□□ 1.45
PACSIN3-208ENST00000531226 GRM8O00222 908 aa24.08■■□□□ 1.45
PACSIN3-208ENST00000531226 FKBP4Q02790 459 aaKnown RBP eCLIP24.08■■□□□ 1.458e-10■□□□□ 10.2
PACSIN3-208ENST00000531226 TMC4Q7Z404 712 aa24.08■■□□□ 1.45
PACSIN3-208ENST00000531226 CELF1Q92879 486 aaKnown RBP24.08■■□□□ 1.45
PACSIN3-208ENST00000531226 LTBP1Q14766 1721 aa24.07■■□□□ 1.44
PACSIN3-208ENST00000531226 GRIPAP1Q4V328 841 aa24.07■■□□□ 1.44
PACSIN3-208ENST00000531226 SLC51AQ86UW1 340 aa24.07■■□□□ 1.44
PACSIN3-208ENST00000531226 ZNF784Q8NCA9 323 aaPredicted RBP24.07■■□□□ 1.44
PACSIN3-208ENST00000531226 API5Q9BZZ5 524 aaKnown RBP24.07■■□□□ 1.44
PACSIN3-208ENST00000531226 RTL9Q8NET4 1388 aa24.06■■□□□ 1.44
PACSIN3-208ENST00000531226 SP8Q8IXZ3 490 aa24.06■■□□□ 1.44
PACSIN3-208ENST00000531226 TTLL11Q8NHH1 800 aa24.06■■□□□ 1.44
PACSIN3-208ENST00000531226 CCDC85AQ96PX6 553 aaPredicted RBP24.06■■□□□ 1.44
PACSIN3-208ENST00000531226 TMX4Q9H1E5 349 aaPredicted RBP24.06■■□□□ 1.44
PACSIN3-208ENST00000531226 SEC31BQ9NQW1 1179 aa24.06■■□□□ 1.44
PACSIN3-208ENST00000531226 C9orf78Q9NZ63 289 aaPredicted RBP24.06■■□□□ 1.44
PACSIN3-208ENST00000531226 ARHGAP45Q92619 1136 aa24.05■■□□□ 1.44
PACSIN3-208ENST00000531226 PSMD1Q99460 953 aa24.05■■□□□ 1.44
PACSIN3-208ENST00000531226 ZC3H4Q9UPT8 1303 aaKnown RBP24.05■■□□□ 1.44
PACSIN3-208ENST00000531226 BCAR3O75815 825 aa24.04■■□□□ 1.44
PACSIN3-208ENST00000531226 DUOX1Q9NRD9 1551 aa24.03■■□□□ 1.44
PACSIN3-208ENST00000531226 RPS8P62241 208 aaKnown RBP24.03■■□□□ 1.44
PACSIN3-208ENST00000531226 GREM2Q9H772 168 aa24.03■■□□□ 1.44
PACSIN3-208ENST00000531226 UTYO14607 1347 aa24.03■■□□□ 1.44
PACSIN3-208ENST00000531226 A0A1B0GUL6 1792 aa24.03■■□□□ 1.44
PACSIN3-208ENST00000531226 CSF1RP07333 972 aa24.02■■□□□ 1.44
PACSIN3-208ENST00000531226 IPO8O15397 1037 aaKnown RBP24.01■■□□□ 1.43
PACSIN3-208ENST00000531226 CCT4P50991 539 aaKnown RBP24.01■■□□□ 1.43
PACSIN3-208ENST00000531226 CDC5LQ99459 802 aaKnown RBP24.01■■□□□ 1.43
PACSIN3-208ENST00000531226 ZNF277Q9NRM2 450 aaPredicted RBP24.01■■□□□ 1.43
PACSIN3-208ENST00000531226 NBPF7P0C2Y1 421 aaPredicted RBP24■■□□□ 1.43
PACSIN3-208ENST00000531226 FOXO4P98177 505 aa24■■□□□ 1.43
PACSIN3-208ENST00000531226 ANKRD18AQ8IVF6 992 aa24■■□□□ 1.43
PACSIN3-208ENST00000531226 IARSP41252 1262 aaKnown RBP23.99■■□□□ 1.43
PACSIN3-208ENST00000531226 FAM161AQ3B820 660 aa23.99■■□□□ 1.43
PACSIN3-208ENST00000531226 MPNDQ8N594 471 aa23.99■■□□□ 1.43
PACSIN3-208ENST00000531226 FRAT1Q92837 279 aaPredicted RBP23.99■■□□□ 1.43
PACSIN3-208ENST00000531226 COL4A5P29400 1685 aa23.99■■□□□ 1.43
PACSIN3-208ENST00000531226 EPHA10Q5JZY3 1008 aa23.98■■□□□ 1.43
PACSIN3-208ENST00000531226 DPP8Q6V1X1 898 aaPredicted RBP23.98■■□□□ 1.43
PACSIN3-208ENST00000531226 ATF7IPQ6VMQ6 1270 aa23.98■■□□□ 1.43
PACSIN3-208ENST00000531226 SUCLG2Q96I99 432 aa23.98■■□□□ 1.43
PACSIN3-208ENST00000531226 RTFDC1Q9BY42 306 aaPredicted RBP23.98■■□□□ 1.43
PACSIN3-208ENST00000531226 USP44Q9H0E7 712 aa23.98■■□□□ 1.43
PACSIN3-208ENST00000531226 TRIM27P14373 513 aa23.97■■□□□ 1.43
PACSIN3-208ENST00000531226 ITGA6P23229 1130 aa23.97■■□□□ 1.43
PACSIN3-208ENST00000531226 SUPT20HQ8NEM7 779 aa23.97■■□□□ 1.43
PACSIN3-208ENST00000531226 ZNF526Q8TF50 670 aaPredicted RBP23.97■■□□□ 1.43
PACSIN3-208ENST00000531226 ZKSCAN2Q63HK3 967 aa23.96■■□□□ 1.43
PACSIN3-208ENST00000531226 KAZALD1Q96I82 304 aa23.96■■□□□ 1.43
PACSIN3-208ENST00000531226 INTS3Q68E01 1043 aaKnown RBP23.95■■□□□ 1.42
PACSIN3-208ENST00000531226 LMBR1LQ6UX01 489 aa23.95■■□□□ 1.42
PACSIN3-208ENST00000531226 VPS33BQ9H267 617 aa23.95■■□□□ 1.42
PACSIN3-208ENST00000531226 GPBP1L1Q9HC44 474 aaPredicted RBP23.95■■□□□ 1.42
PACSIN3-208ENST00000531226 NSFL1CQ9UNZ2 370 aaKnown RBP23.95■■□□□ 1.42
PACSIN3-208ENST00000531226 CHMP3Q9Y3E7 222 aa23.95■■□□□ 1.42
PACSIN3-208ENST00000531226 WDR90Q96KV7 1748 aa23.95■■□□□ 1.42
PACSIN3-208ENST00000531226 ANKRD18BA2A2Z9 1011 aa23.94■■□□□ 1.42
PACSIN3-208ENST00000531226 IGHMBP2P38935 993 aaKnown RBP23.94■■□□□ 1.42
PACSIN3-208ENST00000531226 GPSM2P81274 684 aa23.94■■□□□ 1.42
PACSIN3-208ENST00000531226 BSDC1Q9NW68 430 aaPredicted RBP23.94■■□□□ 1.42
PACSIN3-208ENST00000531226 TNNQ9UQP3 1299 aa23.94■■□□□ 1.42
PACSIN3-208ENST00000531226 KDM2BQ8NHM5 1336 aa23.93■■□□□ 1.42
PACSIN3-208ENST00000531226 PPIP5K2O43314 1243 aa23.93■■□□□ 1.42
PACSIN3-208ENST00000531226 IFIT5Q13325 482 aaKnown RBP23.93■■□□□ 1.42
PACSIN3-208ENST00000531226 PODXL2Q9NZ53 605 aa23.93■■□□□ 1.42
PACSIN3-208ENST00000531226 GLTPD2A6NH11 291 aa23.92■■□□□ 1.42
PACSIN3-208ENST00000531226 RABL6Q3YEC7 729 aaPredicted RBP23.92■■□□□ 1.42
PACSIN3-208ENST00000531226 LARGE2Q8N3Y3 721 aa23.92■■□□□ 1.42
PACSIN3-208ENST00000531226 JDP2Q8WYK2 163 aa23.92■■□□□ 1.42
PACSIN3-208ENST00000531226 BICC1Q9H694 974 aaKnown RBP23.92■■□□□ 1.42
PACSIN3-208ENST00000531226 AOC3Q16853 763 aa23.91■■□□□ 1.42
PACSIN3-208ENST00000531226 CLUAP1Q96AJ1 413 aa23.91■■□□□ 1.42
PACSIN3-208ENST00000531226 SCN4AP35499 1836 aa23.91■■□□□ 1.42
PACSIN3-208ENST00000531226 XDHP47989 1333 aa23.9■■□□□ 1.42
PACSIN3-208ENST00000531226 PSME4Q14997 1843 aa23.9■■□□□ 1.42
PACSIN3-208ENST00000531226 UBTFL1P0CB47 393 aaPredicted RBP23.9■■□□□ 1.42
PACSIN3-208ENST00000531226 KIAA2012Q0VF49 1180 aa23.9■■□□□ 1.42
PACSIN3-208ENST00000531226 CCDC57Q2TAC2 916 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms