RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 HIRAP54198 1017 aaPredicted RBP12.16□□□□□ -0.46
CHMP4A-205ENST00000531158 CXCL9Q07325 125 aa12.16□□□□□ -0.46
CHMP4A-205ENST00000531158 NIM1KQ8IY84 436 aa12.16□□□□□ -0.46
CHMP4A-205ENST00000531158 GMPSP49915 693 aaPredicted RBP12.15□□□□□ -0.46
CHMP4A-205ENST00000531158 GRIPAP1Q4V328 841 aa12.15□□□□□ -0.46
CHMP4A-205ENST00000531158 PARP10Q53GL7 1025 aa12.15□□□□□ -0.46
CHMP4A-205ENST00000531158 HABP4Q5JVS0 413 aaKnown RBP12.15□□□□□ -0.46
CHMP4A-205ENST00000531158 GLIS2Q9BZE0 524 aaPredicted RBP12.15□□□□□ -0.46
CHMP4A-205ENST00000531158 AKAP11Q9UKA4 1901 aa12.14□□□□□ -0.47
CHMP4A-205ENST00000531158 ZNF316A6NFI3 1004 aaPredicted RBP12.14□□□□□ -0.47
CHMP4A-205ENST00000531158 YDJCA8MPS7 323 aa12.14□□□□□ -0.47
CHMP4A-205ENST00000531158 DLK2Q6UY11 383 aa12.14□□□□□ -0.47
CHMP4A-205ENST00000531158 PPP1R42Q7Z4L9 355 aa12.14□□□□□ -0.47
CHMP4A-205ENST00000531158 SAPCD2Q86UD0 394 aa12.14□□□□□ -0.47
CHMP4A-205ENST00000531158 NLRP10Q86W26 655 aa12.14□□□□□ -0.47
CHMP4A-205ENST00000531158 TRPM4Q8TD43 1214 aa12.14□□□□□ -0.47
CHMP4A-205ENST00000531158 ZNF428Q96B54 188 aa12.14□□□□□ -0.47
CHMP4A-205ENST00000531158 NLRP3Q96P20 1036 aa12.14□□□□□ -0.47
CHMP4A-205ENST00000531158 ADARB2Q9NS39 739 aaKnown RBP12.14□□□□□ -0.47
CHMP4A-205ENST00000531158 PGAP2Q9UHJ9 254 aa12.14□□□□□ -0.47
CHMP4A-205ENST00000531158 ZNRF3Q9ULT6 936 aa12.14□□□□□ -0.47
CHMP4A-205ENST00000531158 HCLS1P14317 486 aaPredicted RBP12.13□□□□□ -0.47
CHMP4A-205ENST00000531158 EIF2S2P20042 333 aaKnown RBP12.13□□□□□ -0.47
CHMP4A-205ENST00000531158 BRPF1P55201 1214 aaPredicted RBP12.13□□□□□ -0.47
CHMP4A-205ENST00000531158 KIAA2012Q0VF49 1180 aa12.13□□□□□ -0.47
CHMP4A-205ENST00000531158 KRT24Q2M2I5 525 aa12.13□□□□□ -0.47
CHMP4A-205ENST00000531158 UTP14AQ9BVJ6 771 aaKnown RBP12.13□□□□□ -0.47
CHMP4A-205ENST00000531158 TSPYL4Q9UJ04 414 aa12.13□□□□□ -0.47
CHMP4A-205ENST00000531158 SPEF2Q9C093 1822 aa12.13□□□□□ -0.47
CHMP4A-205ENST00000531158 RAD17O75943 681 aa12.12□□□□□ -0.47
CHMP4A-205ENST00000531158 DIEXFQ68CQ4 756 aaKnown RBP12.12□□□□□ -0.47
CHMP4A-205ENST00000531158 COPS6Q7L5N1 327 aa12.12□□□□□ -0.47
CHMP4A-205ENST00000531158 SP8Q8IXZ3 490 aa12.12□□□□□ -0.47
CHMP4A-205ENST00000531158 NECTIN2Q92692 538 aa12.12□□□□□ -0.47
CHMP4A-205ENST00000531158 ZIC5Q96T25 663 aa12.12□□□□□ -0.47
CHMP4A-205ENST00000531158 VPS33BQ9H267 617 aa12.12□□□□□ -0.47
CHMP4A-205ENST00000531158 CDHR2Q9BYE9 1310 aa12.11□□□□□ -0.47
CHMP4A-205ENST00000531158 CELF2O95319 508 aaKnown RBP12.11□□□□□ -0.47
CHMP4A-205ENST00000531158 EGFRP00533 1210 aa12.11□□□□□ -0.47
CHMP4A-205ENST00000531158 CIAPIN1Q6FI81 312 aa12.11□□□□□ -0.47
CHMP4A-205ENST00000531158 DPP8Q6V1X1 898 aaPredicted RBP12.11□□□□□ -0.47
CHMP4A-205ENST00000531158 MPNDQ8N594 471 aa12.11□□□□□ -0.47
CHMP4A-205ENST00000531158 XAGE3Q8WTP9 111 aa12.11□□□□□ -0.47
CHMP4A-205ENST00000531158 MAPK8IP3Q9UPT6 1336 aa12.11□□□□□ -0.47
CHMP4A-205ENST00000531158 DLL1O00548 723 aa12.1□□□□□ -0.47
CHMP4A-205ENST00000531158 BBOX1O75936 387 aa12.1□□□□□ -0.47
CHMP4A-205ENST00000531158 RIPK4P57078 832 aa12.1□□□□□ -0.47
CHMP4A-205ENST00000531158 AIMP1Q12904 312 aaKnown RBP12.1□□□□□ -0.47
CHMP4A-205ENST00000531158 MYH3P11055 1940 aa12.09□□□□□ -0.47
CHMP4A-205ENST00000531158 RTL9Q8NET4 1388 aa12.09□□□□□ -0.47
CHMP4A-205ENST00000531158 NEFMP07197 916 aa12.09□□□□□ -0.47
CHMP4A-205ENST00000531158 TCIRG1Q13488 830 aa12.09□□□□□ -0.47
CHMP4A-205ENST00000531158 GRAPQ13588 217 aa12.09□□□□□ -0.47
CHMP4A-205ENST00000531158 GRAPLQ8TC17 118 aaPredicted RBP12.09□□□□□ -0.47
CHMP4A-205ENST00000531158 CELF1Q92879 486 aaKnown RBP12.09□□□□□ -0.47
CHMP4A-205ENST00000531158 ZBTB12Q9Y330 459 aaPredicted RBP12.09□□□□□ -0.47
CHMP4A-205ENST00000531158 SH3TC1Q8TE82 1336 aa12.09□□□□□ -0.47
CHMP4A-205ENST00000531158 TMPOP42166 694 aaKnown RBP12.08□□□□□ -0.48
CHMP4A-205ENST00000531158 SUPT20HQ8NEM7 779 aa12.08□□□□□ -0.48
CHMP4A-205ENST00000531158 ZC3H15Q8WU90 426 aaKnown RBP12.08□□□□□ -0.48
CHMP4A-205ENST00000531158 HHIPL1Q96JK4 782 aa12.08□□□□□ -0.48
CHMP4A-205ENST00000531158 ZNF408Q9H9D4 720 aa12.08□□□□□ -0.48
CHMP4A-205ENST00000531158 KCNQ5Q9NR82 932 aa12.08□□□□□ -0.48
CHMP4A-205ENST00000531158 BABAM1Q9NWV8 329 aa12.08□□□□□ -0.48
CHMP4A-205ENST00000531158 CHPF2Q9P2E5 772 aa12.08□□□□□ -0.48
CHMP4A-205ENST00000531158 TRMT112Q9UI30 125 aaKnown RBP12.08□□□□□ -0.48
CHMP4A-205ENST00000531158 CNOT7Q9UIV1 285 aaKnown RBP12.08□□□□□ -0.48
CHMP4A-205ENST00000531158 FAM155AB1AL88 458 aaPredicted RBP12.07□□□□□ -0.48
CHMP4A-205ENST00000531158 CHL1O00533 1208 aa12.07□□□□□ -0.48
CHMP4A-205ENST00000531158 DDX46Q7L014 1031 aaKnown RBP12.07□□□□□ -0.48
CHMP4A-205ENST00000531158 SAMD7Q7Z3H4 446 aa12.07□□□□□ -0.48
CHMP4A-205ENST00000531158 MICALL2Q8IY33 904 aa12.07□□□□□ -0.48
CHMP4A-205ENST00000531158 DBNDD1Q9H9R9 158 aa12.07□□□□□ -0.48
CHMP4A-205ENST00000531158 TRIM35Q9UPQ4 493 aa12.07□□□□□ -0.48
CHMP4A-205ENST00000531158 PSMD14O00487 310 aa12.06□□□□□ -0.48
CHMP4A-205ENST00000531158 FXR1P51114 621 aaKnown RBP eCLIP12.06□□□□□ -0.48
CHMP4A-205ENST00000531158 TNIP1Q15025 636 aa12.06□□□□□ -0.48
CHMP4A-205ENST00000531158 HSP90AB3PQ58FF7 597 aa12.06□□□□□ -0.48
CHMP4A-205ENST00000531158 CDC37L1Q7L3B6 337 aa12.06□□□□□ -0.48
CHMP4A-205ENST00000531158 USP48Q86UV5 1035 aa12.06□□□□□ -0.48
CHMP4A-205ENST00000531158 FAM89AQ96GI7 184 aa12.06□□□□□ -0.48
CHMP4A-205ENST00000531158 ISCA1Q9BUE6 129 aa12.06□□□□□ -0.48
CHMP4A-205ENST00000531158 BCL2L13Q9BXK5 485 aa12.06□□□□□ -0.48
CHMP4A-205ENST00000531158 POLLQ9UGP5 575 aa12.06□□□□□ -0.48
CHMP4A-205ENST00000531158 ASTN2O75129 1339 aaPredicted RBP12.06□□□□□ -0.48
CHMP4A-205ENST00000531158 ADM5C9JUS6 153 aa12.05□□□□□ -0.48
CHMP4A-205ENST00000531158 GPSM2P81274 684 aa12.05□□□□□ -0.48
CHMP4A-205ENST00000531158 SF3B3Q15393 1217 aaKnown RBP12.05□□□□□ -0.48
CHMP4A-205ENST00000531158 CCDC146Q8IYE0 955 aa12.05□□□□□ -0.48
CHMP4A-205ENST00000531158 TMX4Q9H1E5 349 aaPredicted RBP12.05□□□□□ -0.48
CHMP4A-205ENST00000531158 ATP5J2-PTCD1G3V325 749 aa12.04□□□□□ -0.48
CHMP4A-205ENST00000531158 RIMBP2O15034 1052 aa12.04□□□□□ -0.48
CHMP4A-205ENST00000531158 TBC1D10BQ4KMP7 808 aaPredicted RBP12.04□□□□□ -0.48
CHMP4A-205ENST00000531158 PLBD2Q8NHP8 589 aa12.04□□□□□ -0.48
CHMP4A-205ENST00000531158 DPF2Q92785 391 aa12.04□□□□□ -0.48
CHMP4A-205ENST00000531158 PNNQ9H307 717 aaKnown RBP12.04□□□□□ -0.48
CHMP4A-205ENST00000531158 NSFL1CQ9UNZ2 370 aaKnown RBP12.04□□□□□ -0.48
CHMP4A-205ENST00000531158 HPS5Q9UPZ3 1129 aa12.04□□□□□ -0.48
CHMP4A-205ENST00000531158 A0A1B0GUL6 1792 aa12.04□□□□□ -0.48
CHMP4A-205ENST00000531158 ECE2O60344 883 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms