RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 INTS5Q6P9B9 1019 aaKnown RBP12.29□□□□□ -0.44
CTNND1-228ENST00000531007 GIGYF2Q6Y7W6 1299 aaKnown RBP12.29□□□□□ -0.44
CTNND1-228ENST00000531007 MYD88Q99836 296 aa12.29□□□□□ -0.44
CTNND1-228ENST00000531007 BRWD3Q6RI45 1802 aa12.29□□□□□ -0.44
CTNND1-228ENST00000531007 NUP188Q5SRE5 1749 aa12.28□□□□□ -0.44
CTNND1-228ENST00000531007 IGKV5-2P06315 115 aa12.28□□□□□ -0.44
CTNND1-228ENST00000531007 ATP8B2P98198 1209 aa12.28□□□□□ -0.44
CTNND1-228ENST00000531007 TCIRG1Q13488 830 aa12.28□□□□□ -0.44
CTNND1-228ENST00000531007 MTX1Q13505 466 aa12.28□□□□□ -0.44
CTNND1-228ENST00000531007 ITPK1Q13572 414 aa12.28□□□□□ -0.44
CTNND1-228ENST00000531007 TTLL7Q6ZT98 887 aa12.28□□□□□ -0.44
CTNND1-228ENST00000531007 CRISPLD2Q9H0B8 497 aa12.28□□□□□ -0.44
CTNND1-228ENST00000531007 DCTPP1Q9H773 170 aa12.28□□□□□ -0.44
CTNND1-228ENST00000531007 CWC25Q9NXE8 425 aaPredicted RBP12.28□□□□□ -0.44
CTNND1-228ENST00000531007 CCNL1Q9UK58 526 aaPredicted RBP12.28□□□□□ -0.44
CTNND1-228ENST00000531007 ZBTB1Q9Y2K1 713 aa12.28□□□□□ -0.44
CTNND1-228ENST00000531007 PLSCR1O15162 318 aa12.27□□□□□ -0.45
CTNND1-228ENST00000531007 HSP90B1P14625 803 aaKnown RBP12.27□□□□□ -0.45
CTNND1-228ENST00000531007 HSP90AB4PQ58FF6 505 aa12.27□□□□□ -0.45
CTNND1-228ENST00000531007 CLEC4GQ6UXB4 293 aa12.27□□□□□ -0.45
CTNND1-228ENST00000531007 DZIP3Q86Y13 1208 aaKnown RBP12.27□□□□□ -0.45
CTNND1-228ENST00000531007 PLPP6Q8IY26 295 aa12.27□□□□□ -0.45
CTNND1-228ENST00000531007 HS3ST6Q96QI5 342 aa12.27□□□□□ -0.45
CTNND1-228ENST00000531007 ISCA1Q9BUE6 129 aa12.27□□□□□ -0.45
CTNND1-228ENST00000531007 ZNF652Q9Y2D9 606 aa12.27□□□□□ -0.45
CTNND1-228ENST00000531007 LRRFIP2Q9Y608 721 aaKnown RBP12.27□□□□□ -0.45
CTNND1-228ENST00000531007 RPS6KA4O75676 772 aa12.26□□□□□ -0.45
CTNND1-228ENST00000531007 NBPF7P0C2Y1 421 aaPredicted RBP12.26□□□□□ -0.45
CTNND1-228ENST00000531007 PDE4AP27815 886 aa12.26□□□□□ -0.45
CTNND1-228ENST00000531007 PIP4K2AP48426 406 aaPredicted RBP12.26□□□□□ -0.45
CTNND1-228ENST00000531007 DSG2Q14126 1118 aa12.26□□□□□ -0.45
CTNND1-228ENST00000531007 ARSIQ5FYB1 569 aa12.26□□□□□ -0.45
CTNND1-228ENST00000531007 SIRT2Q8IXJ6 389 aa12.26□□□□□ -0.45
CTNND1-228ENST00000531007 C1orf115Q9H7X2 142 aa12.26□□□□□ -0.45
CTNND1-228ENST00000531007 H7C1W4 665 aa12.25□□□□□ -0.45
CTNND1-228ENST00000531007 NUCB1Q02818 461 aa12.25□□□□□ -0.45
CTNND1-228ENST00000531007 CWF19L2Q2TBE0 894 aaKnown RBP12.25□□□□□ -0.45
CTNND1-228ENST00000531007 PARP10Q53GL7 1025 aa12.25□□□□□ -0.45
CTNND1-228ENST00000531007 SPRYD3Q8NCJ5 442 aa12.25□□□□□ -0.45
CTNND1-228ENST00000531007 SSH3Q8TE77 659 aa12.25□□□□□ -0.45
CTNND1-228ENST00000531007 AK7Q96M32 723 aa12.25□□□□□ -0.45
CTNND1-228ENST00000531007 ZBTB3Q9H5J0 574 aa12.25□□□□□ -0.45
CTNND1-228ENST00000531007 RGPD3A6NKT7 1758 aaPredicted RBP12.24□□□□□ -0.45
CTNND1-228ENST00000531007 RAB11FIP3O75154 756 aa12.24□□□□□ -0.45
CTNND1-228ENST00000531007 FAM182BQ5T319 152 aa12.24□□□□□ -0.45
CTNND1-228ENST00000531007 RGPD4Q7Z3J3 1758 aa12.24□□□□□ -0.45
CTNND1-228ENST00000531007 LINC00116Q8NCU8 138 aa12.24□□□□□ -0.45
CTNND1-228ENST00000531007 RTCBQ9Y3I0 505 aaKnown RBP12.24□□□□□ -0.45
CTNND1-228ENST00000531007 ZNF330Q9Y3S2 320 aaPredicted RBP12.24□□□□□ -0.45
CTNND1-228ENST00000531007 AFDNP55196 1824 aaKnown RBP12.23□□□□□ -0.45
CTNND1-228ENST00000531007 CDHR2Q9BYE9 1310 aa12.23□□□□□ -0.45
CTNND1-228ENST00000531007 TRIM37O94972 964 aa12.23□□□□□ -0.45
CTNND1-228ENST00000531007 PCCAP05165 728 aaPredicted RBP12.23□□□□□ -0.45
CTNND1-228ENST00000531007 RABL6Q3YEC7 729 aaPredicted RBP12.23□□□□□ -0.45
CTNND1-228ENST00000531007 ZBTB38Q8NAP3 1195 aaPredicted RBP12.23□□□□□ -0.45
CTNND1-228ENST00000531007 PCDHGA4Q9Y5G9 962 aa12.23□□□□□ -0.45
CTNND1-228ENST00000531007 ANKRD36CQ5JPF3 1778 aa12.23□□□□□ -0.45
CTNND1-228ENST00000531007 SRGAP3O43295 1099 aa12.22□□□□□ -0.45
CTNND1-228ENST00000531007 CAMTA2O94983 1202 aa12.22□□□□□ -0.45
CTNND1-228ENST00000531007 CASP7P55210 303 aa12.22□□□□□ -0.45
CTNND1-228ENST00000531007 SF3B2Q13435 895 aaKnown RBP12.22□□□□□ -0.45
CTNND1-228ENST00000531007 PTF1AQ7RTS3 328 aa12.22□□□□□ -0.45
CTNND1-228ENST00000531007 PPP1R42Q7Z4L9 355 aa12.22□□□□□ -0.45
CTNND1-228ENST00000531007 CHD1LQ86WJ1 897 aa12.22□□□□□ -0.45
CTNND1-228ENST00000531007 CCDC125Q86Z20 511 aa12.22□□□□□ -0.45
CTNND1-228ENST00000531007 ERC1Q8IUD2 1116 aa12.22□□□□□ -0.45
CTNND1-228ENST00000531007 ZNF34Q8IZ26 560 aa12.22□□□□□ -0.45
CTNND1-228ENST00000531007 PLA2G12BQ9BX93 195 aa12.22□□□□□ -0.45
CTNND1-228ENST00000531007 NARFQ9UHQ1 456 aa12.22□□□□□ -0.45
CTNND1-228ENST00000531007 PDZRN3Q9UPQ7 1066 aa12.22□□□□□ -0.45
CTNND1-228ENST00000531007 NOP58Q9Y2X3 529 aaKnown RBP12.22□□□□□ -0.45
CTNND1-228ENST00000531007 TAF1LQ8IZX4 1826 aa12.22□□□□□ -0.45
CTNND1-228ENST00000531007 MYH14Q7Z406 1995 aaKnown RBP12.21□□□□□ -0.45
CTNND1-228ENST00000531007 C4BP0C0L5 1744 aa12.21□□□□□ -0.45
CTNND1-228ENST00000531007 ATP5J2-PTCD1G3V325 749 aa12.21□□□□□ -0.45
CTNND1-228ENST00000531007 UBE3BQ7Z3V4 1068 aa12.21□□□□□ -0.45
CTNND1-228ENST00000531007 NLRP10Q86W26 655 aa12.21□□□□□ -0.45
CTNND1-228ENST00000531007 ARXQ96QS3 562 aa12.21□□□□□ -0.45
CTNND1-228ENST00000531007 TBC1D2BQ9UPU7 963 aa12.21□□□□□ -0.45
CTNND1-228ENST00000531007 PNMA6EA0A0J9YXQ4 647 aa12.2□□□□□ -0.46
CTNND1-228ENST00000531007 ZPR1O75312 459 aa12.2□□□□□ -0.46
CTNND1-228ENST00000531007 SSFA2P28290 1259 aa12.2□□□□□ -0.46
CTNND1-228ENST00000531007 PPP1R15BQ5SWA1 713 aa12.2□□□□□ -0.46
CTNND1-228ENST00000531007 ANKRD45Q5TZF3 282 aa12.2□□□□□ -0.46
CTNND1-228ENST00000531007 FLAD1Q8NFF5 587 aa12.2□□□□□ -0.46
CTNND1-228ENST00000531007 SUCLG2Q96I99 432 aa12.2□□□□□ -0.46
CTNND1-228ENST00000531007 NUP98P52948 1817 aa12.2□□□□□ -0.46
CTNND1-228ENST00000531007 BCORQ6W2J9 1755 aa12.2□□□□□ -0.46
CTNND1-228ENST00000531007 POTEB3A0JP26 581 aa12.19□□□□□ -0.46
CTNND1-228ENST00000531007 GNPATO15228 680 aa12.19□□□□□ -0.46
CTNND1-228ENST00000531007 APBA3O96018 575 aa12.19□□□□□ -0.46
CTNND1-228ENST00000531007 HLFQ16534 295 aa12.19□□□□□ -0.46
CTNND1-228ENST00000531007 TXNRD1Q16881 649 aa12.19□□□□□ -0.46
CTNND1-228ENST00000531007 TRAPPC3LQ5T215 181 aa12.19□□□□□ -0.46
CTNND1-228ENST00000531007 POTEBQ6S5H4 581 aa12.19□□□□□ -0.46
CTNND1-228ENST00000531007 PTCD2Q8WV60 388 aaKnown RBP12.19□□□□□ -0.46
CTNND1-228ENST00000531007 KHSRPQ92945 711 aaKnown RBP eCLIP12.19□□□□□ -0.466e-9■■■□□ 15.6
CTNND1-228ENST00000531007 KIF1BPQ96EK5 621 aa12.19□□□□□ -0.46
CTNND1-228ENST00000531007 KAZALD1Q96I82 304 aa12.19□□□□□ -0.46
CTNND1-228ENST00000531007 LRRCC1Q9C099 1032 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms