RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 GPRC5DQ9NZD1 345 aa20.58■□□□□ 0.89
CHMP4A-204ENST00000530996 TRIM35Q9UPQ4 493 aa20.58■□□□□ 0.89
CHMP4A-204ENST00000530996 TRAF5O00463 557 aa20.57■□□□□ 0.88
CHMP4A-204ENST00000530996 GMPSP49915 693 aaPredicted RBP20.57■□□□□ 0.88
CHMP4A-204ENST00000530996 FMR1Q06787 632 aaKnown RBP eCLIP20.57■□□□□ 0.88
CHMP4A-204ENST00000530996 CIAPIN1Q6FI81 312 aa20.57■□□□□ 0.88
CHMP4A-204ENST00000530996 PLBD2Q8NHP8 589 aa20.57■□□□□ 0.88
CHMP4A-204ENST00000530996 RTFDC1Q9BY42 306 aaPredicted RBP20.57■□□□□ 0.88
CHMP4A-204ENST00000530996 WDR33Q9C0J8 1336 aaKnown RBP20.56■□□□□ 0.88
CHMP4A-204ENST00000530996 RAD17O75943 681 aa20.56■□□□□ 0.88
CHMP4A-204ENST00000530996 HOXB7P09629 217 aa20.56■□□□□ 0.88
CHMP4A-204ENST00000530996 CXCL9Q07325 125 aa20.56■□□□□ 0.88
CHMP4A-204ENST00000530996 KIAA2012Q0VF49 1180 aa20.56■□□□□ 0.88
CHMP4A-204ENST00000530996 DBF4Q9UBU7 674 aaPredicted RBP20.56■□□□□ 0.88
CHMP4A-204ENST00000530996 ATP5J2-PTCD1G3V325 749 aa20.55■□□□□ 0.88
CHMP4A-204ENST00000530996 RTL5Q5HYW3 569 aaPredicted RBP20.55■□□□□ 0.88
CHMP4A-204ENST00000530996 PRDM10Q9NQV6 1147 aa20.55■□□□□ 0.88
CHMP4A-204ENST00000530996 ADAMTS8Q9UP79 889 aa20.55■□□□□ 0.88
CHMP4A-204ENST00000530996 LAMB2P55268 1798 aa20.54■□□□□ 0.88
CHMP4A-204ENST00000530996 LBX1P52954 281 aa20.54■□□□□ 0.88
CHMP4A-204ENST00000530996 MAP2K1Q02750 393 aaPredicted RBP20.54■□□□□ 0.88
CHMP4A-204ENST00000530996 TNIP1Q15025 636 aa20.54■□□□□ 0.88
CHMP4A-204ENST00000530996 DUSP27Q5VZP5 1158 aa20.54■□□□□ 0.88
CHMP4A-204ENST00000530996 ANKRD13DQ6ZTN6 518 aa20.54■□□□□ 0.88
CHMP4A-204ENST00000530996 TMC4Q7Z404 712 aa20.54■□□□□ 0.88
CHMP4A-204ENST00000530996 FAM89AQ96GI7 184 aa20.54■□□□□ 0.88
CHMP4A-204ENST00000530996 WBP1LQ9NX94 342 aa20.54■□□□□ 0.88
CHMP4A-204ENST00000530996 CDHR2Q9BYE9 1310 aa20.53■□□□□ 0.88
CHMP4A-204ENST00000530996 ECE1P42892 770 aa20.53■□□□□ 0.88
CHMP4A-204ENST00000530996 GOLGA2Q08379 1002 aa20.53■□□□□ 0.88
CHMP4A-204ENST00000530996 CAPNS2Q96L46 248 aa20.53■□□□□ 0.88
CHMP4A-204ENST00000530996 ZNF408Q9H9D4 720 aa20.53■□□□□ 0.88
CHMP4A-204ENST00000530996 HYPKQ9NX55 129 aa20.53■□□□□ 0.88
CHMP4A-204ENST00000530996 CFAP44Q96MT7 982 aa20.52■□□□□ 0.88
CHMP4A-204ENST00000530996 BEGAINQ9BUH8 593 aa20.52■□□□□ 0.88
CHMP4A-204ENST00000530996 MBIPQ9NS73 344 aa20.52■□□□□ 0.88
CHMP4A-204ENST00000530996 DUOX1Q9NRD9 1551 aa20.51■□□□□ 0.87
CHMP4A-204ENST00000530996 CELF2O95319 508 aaKnown RBP20.51■□□□□ 0.87
CHMP4A-204ENST00000530996 CYP4F22Q6NT55 531 aa20.51■□□□□ 0.87
CHMP4A-204ENST00000530996 GLIS2Q9BZE0 524 aaPredicted RBP20.51■□□□□ 0.87
CHMP4A-204ENST00000530996 C6orf229H3BNL8 230 aa20.5■□□□□ 0.87
CHMP4A-204ENST00000530996 RIC3Q7Z5B4 369 aa20.5■□□□□ 0.87
CHMP4A-204ENST00000530996 CELF1Q92879 486 aaKnown RBP20.5■□□□□ 0.87
CHMP4A-204ENST00000530996 ISCA1Q9BUE6 129 aa20.5■□□□□ 0.87
CHMP4A-204ENST00000530996 NSFL1CQ9UNZ2 370 aaKnown RBP20.5■□□□□ 0.87
CHMP4A-204ENST00000530996 IRS4O14654 1257 aaPredicted RBP20.49■□□□□ 0.87
CHMP4A-204ENST00000530996 HSPA8P11142 646 aaKnown RBP20.49■□□□□ 0.87
CHMP4A-204ENST00000530996 WASHC4Q2M389 1173 aa20.49■□□□□ 0.87
CHMP4A-204ENST00000530996 TRPM4Q8TD43 1214 aa20.49■□□□□ 0.87
CHMP4A-204ENST00000530996 DBNDD1Q9H9R9 158 aa20.49■□□□□ 0.87
CHMP4A-204ENST00000530996 TLL2Q9Y6L7 1015 aa20.49■□□□□ 0.87
CHMP4A-204ENST00000530996 LRRC37AA6NMS7 1700 aa20.48■□□□□ 0.87
CHMP4A-204ENST00000530996 DDX60Q8IY21 1712 aaKnown RBP20.48■□□□□ 0.87
CHMP4A-204ENST00000530996 YDJCA8MPS7 323 aa20.48■□□□□ 0.87
CHMP4A-204ENST00000530996 RIMBP2O15034 1052 aa20.48■□□□□ 0.87
CHMP4A-204ENST00000530996 CALD1Q05682 793 aaKnown RBP20.48■□□□□ 0.87
CHMP4A-204ENST00000530996 CST9Q5W186 159 aa20.48■□□□□ 0.87
CHMP4A-204ENST00000530996 MICALL2Q8IY33 904 aa20.48■□□□□ 0.87
CHMP4A-204ENST00000530996 GPR101Q96P66 508 aaPredicted RBP20.48■□□□□ 0.87
CHMP4A-204ENST00000530996 THSD7BQ9C0I4 1608 aa20.47■□□□□ 0.87
CHMP4A-204ENST00000530996 H7C1D1 291 aa20.47■□□□□ 0.87
CHMP4A-204ENST00000530996 ELL2O00472 640 aaPredicted RBP20.47■□□□□ 0.87
CHMP4A-204ENST00000530996 EYA3Q99504 573 aa20.47■□□□□ 0.87
CHMP4A-204ENST00000530996 PRKRIP1Q9H875 184 aaPredicted RBP20.47■□□□□ 0.87
CHMP4A-204ENST00000530996 IFT57Q9NWB7 429 aa20.47■□□□□ 0.87
CHMP4A-204ENST00000530996 CNOT7Q9UIV1 285 aaKnown RBP20.47■□□□□ 0.87
CHMP4A-204ENST00000530996 SHTN1A0MZ66 631 aa20.46■□□□□ 0.87
CHMP4A-204ENST00000530996 APAF1O14727 1248 aa20.46■□□□□ 0.87
CHMP4A-204ENST00000530996 GNAI1P63096 354 aa20.46■□□□□ 0.87
CHMP4A-204ENST00000530996 GPSM2P81274 684 aa20.46■□□□□ 0.87
CHMP4A-204ENST00000530996 SF3B3Q15393 1217 aaKnown RBP20.46■□□□□ 0.87
CHMP4A-204ENST00000530996 ZBTB12Q9Y330 459 aaPredicted RBP20.46■□□□□ 0.87
CHMP4A-204ENST00000530996 G3V3G9 751 aa20.45■□□□□ 0.86
CHMP4A-204ENST00000530996 PSMD14O00487 310 aa20.45■□□□□ 0.86
CHMP4A-204ENST00000530996 ECE2O60344 883 aa20.45■□□□□ 0.86
CHMP4A-204ENST00000530996 HSP90B1P14625 803 aaKnown RBP20.45■□□□□ 0.86
CHMP4A-204ENST00000530996 DCAF8Q5TAQ9 597 aa20.45■□□□□ 0.86
CHMP4A-204ENST00000530996 MYD88Q99836 296 aa20.45■□□□□ 0.86
CHMP4A-204ENST00000530996 AOC2O75106 756 aa20.44■□□□□ 0.86
CHMP4A-204ENST00000530996 DOK7Q18PE1 504 aa20.44■□□□□ 0.86
CHMP4A-204ENST00000530996 CDC37L1Q7L3B6 337 aa20.44■□□□□ 0.86
CHMP4A-204ENST00000530996 ZC3H15Q8WU90 426 aaKnown RBP20.44■□□□□ 0.86
CHMP4A-204ENST00000530996 PHAXQ9H814 394 aaKnown RBP20.44■□□□□ 0.86
CHMP4A-204ENST00000530996 UFL1O94874 794 aa20.43■□□□□ 0.86
CHMP4A-204ENST00000530996 HIRAP54198 1017 aaPredicted RBP20.43■□□□□ 0.86
CHMP4A-204ENST00000530996 TBC1D10BQ4KMP7 808 aaPredicted RBP20.43■□□□□ 0.86
CHMP4A-204ENST00000530996 SAPCD2Q86UD0 394 aa20.43■□□□□ 0.86
CHMP4A-204ENST00000530996 ZBTB38Q8NAP3 1195 aaPredicted RBP20.43■□□□□ 0.86
CHMP4A-204ENST00000530996 ANKIB1Q9P2G1 1089 aa20.43■□□□□ 0.86
CHMP4A-204ENST00000530996 POLLQ9UGP5 575 aa20.43■□□□□ 0.86
CHMP4A-204ENST00000530996 COL4A1P02462 1669 aa20.42■□□□□ 0.86
CHMP4A-204ENST00000530996 TAF1P21675 1872 aa20.42■□□□□ 0.86
CHMP4A-204ENST00000530996 TRPM7Q96QT4 1865 aa20.42■□□□□ 0.86
CHMP4A-204ENST00000530996 RPS8P62241 208 aaKnown RBP20.42■□□□□ 0.86
CHMP4A-204ENST00000530996 SAMD7Q7Z3H4 446 aa20.42■□□□□ 0.86
CHMP4A-204ENST00000530996 CCDC85AQ96PX6 553 aaPredicted RBP20.42■□□□□ 0.86
CHMP4A-204ENST00000530996 TSKSQ9UJT2 592 aa20.42■□□□□ 0.86
CHMP4A-204ENST00000530996 DDX58O95786 925 aaKnown RBP20.41■□□□□ 0.86
CHMP4A-204ENST00000530996 ZNF853P0CG23 659 aa20.41■□□□□ 0.86
CHMP4A-204ENST00000530996 TRIM28Q13263 835 aaKnown RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms