RNA–Protein interactions for RNA: ENST00000530809.2

VPS11-204, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-204ENST00000530809 RTF1Q92541 710 aaKnown RBP7.08□□□□□ -1.28
VPS11-204ENST00000530809 ZNRF3Q9ULT6 936 aa7.08□□□□□ -1.28
VPS11-204ENST00000530809 PSME4Q14997 1843 aa7.07□□□□□ -1.28
VPS11-204ENST00000530809 KCNQ3O43525 872 aa7.07□□□□□ -1.28
VPS11-204ENST00000530809 TNIP1Q15025 636 aa7.07□□□□□ -1.28
VPS11-204ENST00000530809 AOC3Q16853 763 aa7.07□□□□□ -1.28
VPS11-204ENST00000530809 CCDC102AQ96A19 550 aa7.07□□□□□ -1.28
VPS11-204ENST00000530809 GCC1Q96CN9 775 aa7.07□□□□□ -1.28
VPS11-204ENST00000530809 GLIS2Q9BZE0 524 aaPredicted RBP7.07□□□□□ -1.28
VPS11-204ENST00000530809 ZNF408Q9H9D4 720 aa7.07□□□□□ -1.28
VPS11-204ENST00000530809 MAP3K15Q6ZN16 1313 aa7.06□□□□□ -1.28
VPS11-204ENST00000530809 RBBP6Q7Z6E9 1792 aaKnown RBP7.06□□□□□ -1.28
VPS11-204ENST00000530809 PRAMEF22A3QJZ6 481 aa7.06□□□□□ -1.28
VPS11-204ENST00000530809 NBPF26B4DH59 902 aa7.06□□□□□ -1.28
VPS11-204ENST00000530809 HTATSF1O43719 755 aaKnown RBP7.06□□□□□ -1.28
VPS11-204ENST00000530809 GMPSP49915 693 aaPredicted RBP7.06□□□□□ -1.28
VPS11-204ENST00000530809 HUNKP57058 714 aa7.06□□□□□ -1.28
VPS11-204ENST00000530809 CXCL9Q07325 125 aa7.06□□□□□ -1.28
VPS11-204ENST00000530809 HLFQ16534 295 aa7.06□□□□□ -1.28
VPS11-204ENST00000530809 NBPF10Q6P3W6 841 aaKnown RBP7.06□□□□□ -1.28
VPS11-204ENST00000530809 KIF6Q6ZMV9 814 aa7.06□□□□□ -1.28
VPS11-204ENST00000530809 PPP1R42Q7Z4L9 355 aa7.06□□□□□ -1.28
VPS11-204ENST00000530809 NUTM1Q86Y26 1132 aa7.06□□□□□ -1.28
VPS11-204ENST00000530809 REM2Q8IYK8 340 aaPredicted RBP7.06□□□□□ -1.28
VPS11-204ENST00000530809 NBPF15Q8N660 670 aa7.06□□□□□ -1.28
VPS11-204ENST00000530809 BCL2L13Q9BXK5 485 aa7.06□□□□□ -1.28
VPS11-204ENST00000530809 RTFDC1Q9BY42 306 aaPredicted RBP7.06□□□□□ -1.28
VPS11-204ENST00000530809 ATP6V0A2Q9Y487 856 aa7.06□□□□□ -1.28
VPS11-204ENST00000530809 SUPT16HQ9Y5B9 1047 aaKnown RBP7.06□□□□□ -1.28
VPS11-204ENST00000530809 TAF1P21675 1872 aa7.06□□□□□ -1.28
VPS11-204ENST00000530809 H7C1D1 291 aa7.05□□□□□ -1.28
VPS11-204ENST00000530809 PRKAR2BP31323 418 aa7.05□□□□□ -1.28
VPS11-204ENST00000530809 SOX10P56693 466 aa7.05□□□□□ -1.28
VPS11-204ENST00000530809 KIAA2012Q0VF49 1180 aa7.05□□□□□ -1.28
VPS11-204ENST00000530809 PKN2Q16513 984 aaKnown RBP7.05□□□□□ -1.28
VPS11-204ENST00000530809 PARP10Q53GL7 1025 aa7.05□□□□□ -1.28
VPS11-204ENST00000530809 RGMBQ6NW40 437 aa7.05□□□□□ -1.28
VPS11-204ENST00000530809 CTU1Q7Z7A3 348 aaKnown RBP7.05□□□□□ -1.28
VPS11-204ENST00000530809 C2orf69Q8N8R5 385 aa7.05□□□□□ -1.28
VPS11-204ENST00000530809 CFAP53Q96M91 514 aa7.05□□□□□ -1.28
VPS11-204ENST00000530809 NLRP3Q96P20 1036 aa7.05□□□□□ -1.28
VPS11-204ENST00000530809 RSPH6AQ9H0K4 717 aa7.05□□□□□ -1.28
VPS11-204ENST00000530809 GBA2Q9HCG7 927 aaPredicted RBP7.05□□□□□ -1.28
VPS11-204ENST00000530809 PAPPA2Q9BXP8 1791 aa7.05□□□□□ -1.28
VPS11-204ENST00000530809 UBN2Q6ZU65 1347 aa7.04□□□□□ -1.28
VPS11-204ENST00000530809 FAM155AB1AL88 458 aaPredicted RBP7.04□□□□□ -1.28
VPS11-204ENST00000530809 PER1O15534 1290 aaPredicted RBP7.04□□□□□ -1.28
VPS11-204ENST00000530809 BBOX1O75936 387 aa7.04□□□□□ -1.28
VPS11-204ENST00000530809 NTSR2O95665 410 aa7.04□□□□□ -1.28
VPS11-204ENST00000530809 VASPP50552 380 aaPredicted RBP7.04□□□□□ -1.28
VPS11-204ENST00000530809 TAF7Q15545 349 aaPredicted RBP7.04□□□□□ -1.28
VPS11-204ENST00000530809 CC2D1BQ5T0F9 858 aaKnown RBP7.04□□□□□ -1.28
VPS11-204ENST00000530809 DPP8Q6V1X1 898 aaPredicted RBP7.04□□□□□ -1.28
VPS11-204ENST00000530809 GIGYF2Q6Y7W6 1299 aaKnown RBP7.04□□□□□ -1.28
VPS11-204ENST00000530809 TMC4Q7Z404 712 aa7.04□□□□□ -1.28
VPS11-204ENST00000530809 SP8Q8IXZ3 490 aa7.04□□□□□ -1.28
VPS11-204ENST00000530809 MPNDQ8N594 471 aa7.04□□□□□ -1.28
VPS11-204ENST00000530809 PNISRQ8TF01 805 aaKnown RBP7.04□□□□□ -1.28
VPS11-204ENST00000530809 DPF2Q92785 391 aa7.04□□□□□ -1.28
VPS11-204ENST00000530809 CNOT7Q9UIV1 285 aaKnown RBP7.04□□□□□ -1.28
VPS11-204ENST00000530809 NUDCQ9Y266 331 aa7.04□□□□□ -1.28
VPS11-204ENST00000530809 LAMB1P07942 1786 aa7.04□□□□□ -1.28
VPS11-204ENST00000530809 DUOX1Q9NRD9 1551 aa7.03□□□□□ -1.28
VPS11-204ENST00000530809 ERBB4Q15303 1308 aa7.03□□□□□ -1.28
VPS11-204ENST00000530809 SPDYE2BA6NHP3 402 aa7.03□□□□□ -1.28
VPS11-204ENST00000530809 TCERG1O14776 1098 aaKnown RBP7.03□□□□□ -1.28
VPS11-204ENST00000530809 TRPA1O75762 1119 aa7.03□□□□□ -1.28
VPS11-204ENST00000530809 SPDYE6P0CI01 402 aa7.03□□□□□ -1.28
VPS11-204ENST00000530809 RPS12P25398 132 aaKnown RBP7.03□□□□□ -1.28
VPS11-204ENST00000530809 ZNF157P51786 506 aaPredicted RBP7.03□□□□□ -1.28
VPS11-204ENST00000530809 HIRAP54198 1017 aaPredicted RBP7.03□□□□□ -1.28
VPS11-204ENST00000530809 KIF23Q02241 960 aaPredicted RBP7.03□□□□□ -1.28
VPS11-204ENST00000530809 SPDYE2Q495Y8 402 aa7.03□□□□□ -1.28
VPS11-204ENST00000530809 SUSD4Q5VX71 490 aa7.03□□□□□ -1.28
VPS11-204ENST00000530809 MCM10Q7L590 875 aa7.03□□□□□ -1.28
VPS11-204ENST00000530809 KRT26Q7Z3Y9 468 aa7.03□□□□□ -1.28
VPS11-204ENST00000530809 MICALL2Q8IY33 904 aa7.03□□□□□ -1.28
VPS11-204ENST00000530809 ZNF34Q8IZ26 560 aa7.03□□□□□ -1.28
VPS11-204ENST00000530809 TRPM4Q8TD43 1214 aa7.03□□□□□ -1.28
VPS11-204ENST00000530809 DCPSQ96C86 337 aaKnown RBP7.03□□□□□ -1.28
VPS11-204ENST00000530809 PHACTR3Q96KR7 559 aa7.03□□□□□ -1.28
VPS11-204ENST00000530809 RNF186Q9NXI6 227 aa7.03□□□□□ -1.28
VPS11-204ENST00000530809 ABCC4O15439 1325 aa7.02□□□□□ -1.28
VPS11-204ENST00000530809 RAD17O75943 681 aa7.02□□□□□ -1.29
VPS11-204ENST00000530809 SLC10A3P09131 477 aa7.02□□□□□ -1.29
VPS11-204ENST00000530809 GPTP24298 496 aa7.02□□□□□ -1.29
VPS11-204ENST00000530809 SLC10A5Q5PT55 438 aa7.02□□□□□ -1.29
VPS11-204ENST00000530809 USP48Q86UV5 1035 aa7.02□□□□□ -1.29
VPS11-204ENST00000530809 ZIC5Q96T25 663 aa7.02□□□□□ -1.29
VPS11-204ENST00000530809 ZBTB3Q9H5J0 574 aa7.02□□□□□ -1.29
VPS11-204ENST00000530809 SCN9AQ15858 1988 aa7.02□□□□□ -1.29
VPS11-204ENST00000530809 NEFMP07197 916 aa7.01□□□□□ -1.29
VPS11-204ENST00000530809 FKBP1BP68106 108 aa7.01□□□□□ -1.29
VPS11-204ENST00000530809 NOM1Q5C9Z4 860 aaKnown RBP7.01□□□□□ -1.29
VPS11-204ENST00000530809 TTLL7Q6ZT98 887 aa7.01□□□□□ -1.29
VPS11-204ENST00000530809 DDX46Q7L014 1031 aaKnown RBP7.01□□□□□ -1.29
VPS11-204ENST00000530809 SULF1Q8IWU6 871 aa7.01□□□□□ -1.29
VPS11-204ENST00000530809 FAM9BQ8IZU0 186 aa7.01□□□□□ -1.29
VPS11-204ENST00000530809 NGEFQ8N5V2 710 aa7.01□□□□□ -1.29
VPS11-204ENST00000530809 UTP14AQ9BVJ6 771 aaKnown RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms