RNA–Protein interactions for RNA: ENST00000530695.1

PKP3-207, Transcript of plakophilin 3, humanhuman

TSL 5

Gene PKP3, Length 441 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-207ENST00000530695 RIC3Q7Z5B4 369 aa22.01■■□□□ 1.11
PKP3-207ENST00000530695 MKRN1Q9UHC7 482 aaKnown RBP22.01■■□□□ 1.11
PKP3-207ENST00000530695 SCNN1DP51172 638 aa22■■□□□ 1.11
PKP3-207ENST00000530695 GOLGA2Q08379 1002 aa22■■□□□ 1.11
PKP3-207ENST00000530695 MAP1SQ66K74 1059 aaPredicted RBP22■■□□□ 1.11
PKP3-207ENST00000530695 C8orf58Q8NAV2 365 aa22■■□□□ 1.11
PKP3-207ENST00000530695 PHAXQ9H814 394 aaKnown RBP22■■□□□ 1.11
PKP3-207ENST00000530695 TRIM28Q13263 835 aaKnown RBP21.99■■□□□ 1.11
PKP3-207ENST00000530695 CCDC184Q52MB2 194 aa21.99■■□□□ 1.11
PKP3-207ENST00000530695 RTL5Q5HYW3 569 aaPredicted RBP21.99■■□□□ 1.11
PKP3-207ENST00000530695 TMC4Q7Z404 712 aa21.99■■□□□ 1.11
PKP3-207ENST00000530695 CNTROBQ8N137 903 aa21.99■■□□□ 1.11
PKP3-207ENST00000530695 ZNRF3Q9ULT6 936 aa21.99■■□□□ 1.11
PKP3-207ENST00000530695 TMEM88BA6NKF7 163 aa21.98■■□□□ 1.11
PKP3-207ENST00000530695 EPS15P42566 896 aa21.98■■□□□ 1.11
PKP3-207ENST00000530695 SF3B3Q15393 1217 aaKnown RBP21.98■■□□□ 1.11
PKP3-207ENST00000530695 TRPM7Q96QT4 1865 aa21.98■■□□□ 1.11
PKP3-207ENST00000530695 DUOX1Q9NRD9 1551 aa21.97■■□□□ 1.11
PKP3-207ENST00000530695 HSPA1AP0DMV8 641 aaKnown RBP21.97■■□□□ 1.11
PKP3-207ENST00000530695 HSPA1BP0DMV9 641 aaKnown RBP21.97■■□□□ 1.11
PKP3-207ENST00000530695 CXCL9Q07325 125 aa21.97■■□□□ 1.11
PKP3-207ENST00000530695 KIAA2012Q0VF49 1180 aa21.97■■□□□ 1.11
PKP3-207ENST00000530695 CNTNAP1P78357 1384 aa21.97■■□□□ 1.11
PKP3-207ENST00000530695 IRS4O14654 1257 aaPredicted RBP21.96■■□□□ 1.11
PKP3-207ENST00000530695 CHMP4AQ9BY43 222 aa21.96■■□□□ 1.11
PKP3-207ENST00000530695 COL4A1P02462 1669 aa21.95■■□□□ 1.1
PKP3-207ENST00000530695 COL13A1Q5TAT6 717 aaPredicted RBP21.95■■□□□ 1.1
PKP3-207ENST00000530695 CCDC30Q5VVM6 783 aa21.95■■□□□ 1.1
PKP3-207ENST00000530695 CELF1Q92879 486 aaKnown RBP21.95■■□□□ 1.1
PKP3-207ENST00000530695 MYD88Q99836 296 aa21.95■■□□□ 1.1
PKP3-207ENST00000530695 ZEB1P37275 1124 aaPredicted RBP21.94■■□□□ 1.1
PKP3-207ENST00000530695 USP50Q70EL3 339 aaPredicted RBP21.94■■□□□ 1.1
PKP3-207ENST00000530695 TSPYL6Q8N831 410 aa21.94■■□□□ 1.1
PKP3-207ENST00000530695 ZBTB38Q8NAP3 1195 aaPredicted RBP21.94■■□□□ 1.1
PKP3-207ENST00000530695 GPRC5DQ9NZD1 345 aa21.94■■□□□ 1.1
PKP3-207ENST00000530695 DDX58O95786 925 aaKnown RBP21.93■■□□□ 1.1
PKP3-207ENST00000530695 CIAPIN1Q6FI81 312 aa21.93■■□□□ 1.1
PKP3-207ENST00000530695 TSR2Q969E8 191 aaKnown RBP21.93■■□□□ 1.1
PKP3-207ENST00000530695 NSFL1CQ9UNZ2 370 aaKnown RBP21.93■■□□□ 1.1
PKP3-207ENST00000530695 MYH3P11055 1940 aa21.92■■□□□ 1.1
PKP3-207ENST00000530695 RAD17O75943 681 aa21.92■■□□□ 1.1
PKP3-207ENST00000530695 HSP90B1P14625 803 aaKnown RBP21.92■■□□□ 1.1
PKP3-207ENST00000530695 GMPSP49915 693 aaPredicted RBP21.92■■□□□ 1.1
PKP3-207ENST00000530695 CCDC27Q2M243 656 aa21.92■■□□□ 1.1
PKP3-207ENST00000530695 CCDC191Q8NCU4 936 aa21.92■■□□□ 1.1
PKP3-207ENST00000530695 ADARB2Q9NS39 739 aaKnown RBP21.92■■□□□ 1.1
PKP3-207ENST00000530695 CACNA1FO60840 1977 aa21.92■■□□□ 1.1
PKP3-207ENST00000530695 TNIP1Q15025 636 aa21.91■■□□□ 1.1
PKP3-207ENST00000530695 WASHC4Q2M389 1173 aa21.91■■□□□ 1.1
PKP3-207ENST00000530695 PCCAP05165 728 aaPredicted RBP21.9■■□□□ 1.1
PKP3-207ENST00000530695 VEGFBP49765 207 aa21.9■■□□□ 1.1
PKP3-207ENST00000530695 RPS8P62241 208 aaKnown RBP21.9■■□□□ 1.1
PKP3-207ENST00000530695 WWC1Q8IX03 1113 aa21.9■■□□□ 1.1
PKP3-207ENST00000530695 METTL22Q9BUU2 404 aaPredicted RBP21.9■■□□□ 1.1
PKP3-207ENST00000530695 BCL2L13Q9BXK5 485 aa21.9■■□□□ 1.1
PKP3-207ENST00000530695 CWC25Q9NXE8 425 aaPredicted RBP21.9■■□□□ 1.1
PKP3-207ENST00000530695 CDHR2Q9BYE9 1310 aa21.89■■□□□ 1.1
PKP3-207ENST00000530695 YDJCA8MPS7 323 aa21.89■■□□□ 1.09
PKP3-207ENST00000530695 C6orf229H3BNL8 230 aa21.89■■□□□ 1.09
PKP3-207ENST00000530695 GPSM2P81274 684 aa21.89■■□□□ 1.09
PKP3-207ENST00000530695 MRS2Q9HD23 443 aa21.89■■□□□ 1.09
PKP3-207ENST00000530695 MAP3K2Q9Y2U5 619 aa21.89■■□□□ 1.09
PKP3-207ENST00000530695 JARID2Q92833 1246 aaPredicted RBP21.88■■□□□ 1.09
PKP3-207ENST00000530695 STK31Q9BXU1 1019 aa21.88■■□□□ 1.09
PKP3-207ENST00000530695 POLLQ9UGP5 575 aa21.88■■□□□ 1.09
PKP3-207ENST00000530695 ABT1Q9ULW3 272 aaKnown RBP21.88■■□□□ 1.09
PKP3-207ENST00000530695 RASSF10A6NK89 507 aa21.87■■□□□ 1.09
PKP3-207ENST00000530695 RIMBP2O15034 1052 aa21.87■■□□□ 1.09
PKP3-207ENST00000530695 ANP32CO43423 234 aa21.87■■□□□ 1.09
PKP3-207ENST00000530695 FMR1Q06787 632 aaKnown RBP eCLIP21.87■■□□□ 1.093e-7■□□□□ 10.6
PKP3-207ENST00000530695 DEFB115Q30KQ5 88 aa21.87■■□□□ 1.09
PKP3-207ENST00000530695 CCDC152Q4G0S7 254 aa21.87■■□□□ 1.09
PKP3-207ENST00000530695 KSR2Q6VAB6 950 aa21.87■■□□□ 1.09
PKP3-207ENST00000530695 SEC31BQ9NQW1 1179 aa21.87■■□□□ 1.09
PKP3-207ENST00000530695 SPEF2Q9C093 1822 aa21.87■■□□□ 1.09
PKP3-207ENST00000530695 POLR2AP24928 1970 aaKnown RBP21.87■■□□□ 1.09
PKP3-207ENST00000530695 PI4KAP2A4QPH2 592 aa21.86■■□□□ 1.09
PKP3-207ENST00000530695 PDE8AO60658 829 aa21.86■■□□□ 1.09
PKP3-207ENST00000530695 TWISTNBQ3B726 338 aaPredicted RBP21.86■■□□□ 1.09
PKP3-207ENST00000530695 PI4KAP1Q8N8J0 262 aa21.86■■□□□ 1.09
PKP3-207ENST00000530695 EYA3Q99504 573 aa21.86■■□□□ 1.09
PKP3-207ENST00000530695 DBNDD1Q9H9R9 158 aa21.86■■□□□ 1.09
PKP3-207ENST00000530695 SCN9AQ15858 1988 aa21.86■■□□□ 1.09
PKP3-207ENST00000530695 IL16Q14005 1332 aa21.85■■□□□ 1.09
PKP3-207ENST00000530695 ZNF316A6NFI3 1004 aaPredicted RBP21.85■■□□□ 1.09
PKP3-207ENST00000530695 TRAF5O00463 557 aa21.85■■□□□ 1.09
PKP3-207ENST00000530695 TNS4Q8IZW8 715 aa21.85■■□□□ 1.09
PKP3-207ENST00000530695 TBC1D16Q8TBP0 767 aa21.85■■□□□ 1.09
PKP3-207ENST00000530695 CNOT7Q9UIV1 285 aaKnown RBP21.85■■□□□ 1.09
PKP3-207ENST00000530695 GPR101Q96P66 508 aaPredicted RBP21.84■■□□□ 1.09
PKP3-207ENST00000530695 CCDC85AQ96PX6 553 aaPredicted RBP21.84■■□□□ 1.09
PKP3-207ENST00000530695 H7C1D1 291 aa21.83■■□□□ 1.09
PKP3-207ENST00000530695 PSMD14O00487 310 aa21.83■■□□□ 1.09
PKP3-207ENST00000530695 ECE2O60344 883 aa21.83■■□□□ 1.09
PKP3-207ENST00000530695 IGKV5-2P06315 115 aa21.83■■□□□ 1.09
PKP3-207ENST00000530695 NEXNQ0ZGT2 675 aa21.83■■□□□ 1.09
PKP3-207ENST00000530695 NCBP3Q53F19 620 aaKnown RBP21.83■■□□□ 1.09
PKP3-207ENST00000530695 PODXL2Q9NZ53 605 aa21.83■■□□□ 1.09
PKP3-207ENST00000530695 ANKIB1Q9P2G1 1089 aa21.83■■□□□ 1.09
PKP3-207ENST00000530695 ZBTB12Q9Y330 459 aaPredicted RBP21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms