RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 GDPD2Q9HCC8 539 aa13.07□□□□□ -0.32
CCDC90B-217ENST00000530253 AVENQ9NQS1 362 aaPredicted RBP13.07□□□□□ -0.32
CCDC90B-217ENST00000530253 DNAAF2Q9NVR5 837 aaKnown RBP13.07□□□□□ -0.32
CCDC90B-217ENST00000530253 LMTK3Q96Q04 1460 aa13.07□□□□□ -0.32
CCDC90B-217ENST00000530253 C3P01024 1663 aa13.07□□□□□ -0.32
CCDC90B-217ENST00000530253 EFCAB6Q5THR3 1501 aa13.07□□□□□ -0.32
CCDC90B-217ENST00000530253 RAB3GAP2Q9H2M9 1393 aa13.07□□□□□ -0.32
CCDC90B-217ENST00000530253 GRIN2CQ14957 1233 aa13.06□□□□□ -0.32
CCDC90B-217ENST00000530253 FAM182BQ5T319 152 aa13.06□□□□□ -0.32
CCDC90B-217ENST00000530253 ZDHHC3Q9NYG2 299 aa13.06□□□□□ -0.32
CCDC90B-217ENST00000530253 PZPP20742 1482 aa13.05□□□□□ -0.32
CCDC90B-217ENST00000530253 K7ELQ4 463 aaPredicted RBP13.05□□□□□ -0.32
CCDC90B-217ENST00000530253 COL8A1P27658 744 aa13.05□□□□□ -0.32
CCDC90B-217ENST00000530253 ADH6P28332 368 aa13.05□□□□□ -0.32
CCDC90B-217ENST00000530253 ARSJQ5FYB0 599 aaPredicted RBP13.05□□□□□ -0.32
CCDC90B-217ENST00000530253 TET3O43151 1660 aa13.05□□□□□ -0.32
CCDC90B-217ENST00000530253 ARHGAP31Q2M1Z3 1444 aa13.05□□□□□ -0.32
CCDC90B-217ENST00000530253 LINC00114Q6XXX2 140 aa13.04□□□□□ -0.32
CCDC90B-217ENST00000530253 BTBD6Q96KE9 485 aa13.04□□□□□ -0.32
CCDC90B-217ENST00000530253 SLC4A9Q96Q91 983 aa13.04□□□□□ -0.32
CCDC90B-217ENST00000530253 ZMYM3Q14202 1370 aa13.04□□□□□ -0.32
CCDC90B-217ENST00000530253 NPATQ14207 1427 aa13.04□□□□□ -0.32
CCDC90B-217ENST00000530253 NEURL1BA8MQ27 555 aa13.03□□□□□ -0.32
CCDC90B-217ENST00000530253 CDK2AP1O14519 115 aa13.03□□□□□ -0.32
CCDC90B-217ENST00000530253 BAG6P46379 1132 aa13.03□□□□□ -0.32
CCDC90B-217ENST00000530253 GJA3Q9Y6H8 435 aa13.03□□□□□ -0.32
CCDC90B-217ENST00000530253 WASHC2CQ9Y4E1 1318 aa13.03□□□□□ -0.32
CCDC90B-217ENST00000530253 NUP155O75694 1391 aa13.03□□□□□ -0.32
CCDC90B-217ENST00000530253 KANK1Q14678 1352 aa13.03□□□□□ -0.32
CCDC90B-217ENST00000530253 A0A1W2PNR3 127 aa13.02□□□□□ -0.33
CCDC90B-217ENST00000530253 MTFR1Q15390 333 aa13.02□□□□□ -0.33
CCDC90B-217ENST00000530253 A6NJY4 79 aa13.01□□□□□ -0.33
CCDC90B-217ENST00000530253 HOXB4P17483 251 aaPredicted RBP13.01□□□□□ -0.33
CCDC90B-217ENST00000530253 DGKGP49619 791 aa13.01□□□□□ -0.33
CCDC90B-217ENST00000530253 SERTAD1Q9UHV2 236 aa13.01□□□□□ -0.33
CCDC90B-217ENST00000530253 SPATA31D1Q6ZQQ2 1576 aa13.01□□□□□ -0.33
CCDC90B-217ENST00000530253 E9PCH4 1651 aa13.01□□□□□ -0.33
CCDC90B-217ENST00000530253 ERVK-7P63135 1459 aa13□□□□□ -0.33
CCDC90B-217ENST00000530253 BACH1O14867 736 aa13□□□□□ -0.33
CCDC90B-217ENST00000530253 LZTS3O60299 673 aaPredicted RBP13□□□□□ -0.33
CCDC90B-217ENST00000530253 MAPTP10636 758 aaKnown RBP13□□□□□ -0.33
CCDC90B-217ENST00000530253 TNP2Q05952 138 aa13□□□□□ -0.33
CCDC90B-217ENST00000530253 PREX1Q8TCU6 1659 aa12.99□□□□□ -0.33
CCDC90B-217ENST00000530253 RPRD2Q5VT52 1461 aaKnown RBP12.99□□□□□ -0.33
CCDC90B-217ENST00000530253 DCDC2BA2VCK2 349 aa12.99□□□□□ -0.33
CCDC90B-217ENST00000530253 FAM157BP0CG42 384 aa12.99□□□□□ -0.33
CCDC90B-217ENST00000530253 EML3Q32P44 896 aa12.99□□□□□ -0.33
CCDC90B-217ENST00000530253 CABP1Q9NZU7 370 aa12.99□□□□□ -0.33
CCDC90B-217ENST00000530253 NOS1P29475 1434 aa12.98□□□□□ -0.33
CCDC90B-217ENST00000530253 TMEM229AB2RXF0 380 aa12.98□□□□□ -0.33
CCDC90B-217ENST00000530253 KHNYNO15037 678 aaKnown RBP12.98□□□□□ -0.33
CCDC90B-217ENST00000530253 TPRNQ4KMQ1 711 aa12.98□□□□□ -0.33
CCDC90B-217ENST00000530253 CHSY3Q70JA7 882 aa12.98□□□□□ -0.33
CCDC90B-217ENST00000530253 IQSEC3Q9UPP2 1182 aaPredicted RBP12.98□□□□□ -0.33
CCDC90B-217ENST00000530253 LAMC2Q13753 1193 aa12.97□□□□□ -0.33
CCDC90B-217ENST00000530253 SAMD5Q5TGI4 173 aa12.97□□□□□ -0.33
CCDC90B-217ENST00000530253 WWC1Q8IX03 1113 aa12.97□□□□□ -0.33
CCDC90B-217ENST00000530253 SUV39H2Q9H5I1 410 aa12.97□□□□□ -0.33
CCDC90B-217ENST00000530253 SYNMO15061 1565 aa12.97□□□□□ -0.33
CCDC90B-217ENST00000530253 MYO3AQ8NEV4 1616 aa12.96□□□□□ -0.33
CCDC90B-217ENST00000530253 CD33P20138 364 aa12.96□□□□□ -0.33
CCDC90B-217ENST00000530253 ZNF295-AS1Q8N0V1 137 aa12.96□□□□□ -0.33
CCDC90B-217ENST00000530253 PRR12Q9ULL5 1215 aa12.96□□□□□ -0.33
CCDC90B-217ENST00000530253 NOD1Q9Y239 953 aa12.96□□□□□ -0.33
CCDC90B-217ENST00000530253 ACIN1Q9UKV3 1341 aaKnown RBP12.95□□□□□ -0.34
CCDC90B-217ENST00000530253 MCM6Q14566 821 aa12.95□□□□□ -0.34
CCDC90B-217ENST00000530253 ZNF468Q5VIY5 522 aaPredicted RBP12.95□□□□□ -0.34
CCDC90B-217ENST00000530253 BICDL1Q6ZP65 573 aa12.95□□□□□ -0.34
CCDC90B-217ENST00000530253 ZIC5Q96T25 663 aa12.95□□□□□ -0.34
CCDC90B-217ENST00000530253 PTPRTO14522 1441 aa12.95□□□□□ -0.34
CCDC90B-217ENST00000530253 TNRQ92752 1358 aa12.94□□□□□ -0.34
CCDC90B-217ENST00000530253 SETD1BQ9UPS6 1966 aaKnown RBP12.94□□□□□ -0.34
CCDC90B-217ENST00000530253 PLA2R1Q13018 1463 aa12.94□□□□□ -0.34
CCDC90B-217ENST00000530253 NFATC2IPQ8NCF5 419 aa12.94□□□□□ -0.34
CCDC90B-217ENST00000530253 ZNF142P52746 1687 aaPredicted RBP12.93□□□□□ -0.34
CCDC90B-217ENST00000530253 PIK3C2BO00750 1634 aa12.93□□□□□ -0.34
CCDC90B-217ENST00000530253 MARK1Q9P0L2 795 aa12.93□□□□□ -0.34
CCDC90B-217ENST00000530253 PCDHGA11Q9Y5H2 935 aa12.93□□□□□ -0.34
CCDC90B-217ENST00000530253 TRPM2O94759 1503 aa12.93□□□□□ -0.34
CCDC90B-217ENST00000530253 STRCQ7RTU9 1775 aa12.92□□□□□ -0.34
CCDC90B-217ENST00000530253 SPHKAPQ2M3C7 1700 aa12.92□□□□□ -0.34
CCDC90B-217ENST00000530253 UHRF1BP1Q6BDS2 1440 aa12.92□□□□□ -0.34
CCDC90B-217ENST00000530253 MPHOSPH9Q99550 1183 aa12.92□□□□□ -0.34
CCDC90B-217ENST00000530253 PCGF6Q9BYE7 350 aa12.92□□□□□ -0.34
CCDC90B-217ENST00000530253 GPC6Q9Y625 555 aaPredicted RBP12.92□□□□□ -0.34
CCDC90B-217ENST00000530253 NLRP1Q9C000 1473 aa12.91□□□□□ -0.34
CCDC90B-217ENST00000530253 UGGT1Q9NYU2 1555 aa12.91□□□□□ -0.34
CCDC90B-217ENST00000530253 CEP170BQ9Y4F5 1589 aaPredicted RBP12.91□□□□□ -0.34
CCDC90B-217ENST00000530253 C1QTNF9BB2RNN3 333 aa12.91□□□□□ -0.34
CCDC90B-217ENST00000530253 PSME1Q06323 249 aa12.91□□□□□ -0.34
CCDC90B-217ENST00000530253 FCHSD1Q86WN1 690 aa12.91□□□□□ -0.34
CCDC90B-217ENST00000530253 SKIP12755 728 aa12.9□□□□□ -0.34
CCDC90B-217ENST00000530253 GTF2IP78347 998 aa12.9□□□□□ -0.34
CCDC90B-217ENST00000530253 XP32Q5T750 250 aa12.9□□□□□ -0.34
CCDC90B-217ENST00000530253 SCHIP1Q9P0W5 487 aaPredicted RBP12.9□□□□□ -0.34
CCDC90B-217ENST00000530253 A2ML1A8K2U0 1454 aa12.9□□□□□ -0.34
CCDC90B-217ENST00000530253 SPDYE3A6NKU9 549 aa12.89□□□□□ -0.35
CCDC90B-217ENST00000530253 FURINP09958 794 aa12.89□□□□□ -0.35
CCDC90B-217ENST00000530253 CD163Q86VB7 1156 aa12.89□□□□□ -0.35
CCDC90B-217ENST00000530253 KLF15Q9UIH9 416 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms