RNA–Protein interactions for RNA: ENST00000530094.5

CTNND1-225, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-225ENST00000530094 SKIDA1Q1XH10 827 aa9.79□□□□□ -0.84
CTNND1-225ENST00000530094 ARHGAP29Q52LW3 1261 aa9.79□□□□□ -0.84
CTNND1-225ENST00000530094 UTP14AQ9BVJ6 771 aaKnown RBP9.79□□□□□ -0.84
CTNND1-225ENST00000530094 BACH2Q9BYV9 841 aa9.79□□□□□ -0.84
CTNND1-225ENST00000530094 RANBP6O60518 1105 aaKnown RBP9.78□□□□□ -0.84
CTNND1-225ENST00000530094 TPTE2Q6XPS3 522 aa9.78□□□□□ -0.84
CTNND1-225ENST00000530094 GOLGA8AA7E2F4 631 aa9.78□□□□□ -0.84
CTNND1-225ENST00000530094 GOLGA8BA8MQT2 603 aa9.78□□□□□ -0.84
CTNND1-225ENST00000530094 SSR1P43307 286 aaKnown RBP9.78□□□□□ -0.84
CTNND1-225ENST00000530094 PRPF40BQ6NWY9 871 aaKnown RBP9.78□□□□□ -0.84
CTNND1-225ENST00000530094 FAM114A1Q8IWE2 563 aa9.78□□□□□ -0.84
CTNND1-225ENST00000530094 TMEM87AQ8NBN3 555 aa9.78□□□□□ -0.84
CTNND1-225ENST00000530094 CALML4Q96GE6 196 aa9.78□□□□□ -0.84
CTNND1-225ENST00000530094 SNRKQ9NRH2 765 aa9.78□□□□□ -0.84
CTNND1-225ENST00000530094 HDAC9Q9UKV0 1011 aa9.78□□□□□ -0.84
CTNND1-225ENST00000530094 BAG6P46379 1132 aa9.78□□□□□ -0.84
CTNND1-225ENST00000530094 NLRP5P59047 1200 aa9.78□□□□□ -0.84
CTNND1-225ENST00000530094 HMG20BQ9P0W2 317 aa9.78□□□□□ -0.84
CTNND1-225ENST00000530094 POLR3AO14802 1390 aaPredicted RBP9.78□□□□□ -0.84
CTNND1-225ENST00000530094 ROBO2Q9HCK4 1378 aa9.78□□□□□ -0.84
CTNND1-225ENST00000530094 ANAPC15P60006 121 aa9.78□□□□□ -0.84
CTNND1-225ENST00000530094 CCDC83Q8IWF9 413 aa9.78□□□□□ -0.84
CTNND1-225ENST00000530094 KANK3Q6NY19 840 aa9.77□□□□□ -0.84
CTNND1-225ENST00000530094 IFIT3O14879 490 aaKnown RBP9.77□□□□□ -0.85
CTNND1-225ENST00000530094 CACNA2D4Q7Z3S7 1137 aa9.77□□□□□ -0.85
CTNND1-225ENST00000530094 CRNKL1Q9BZJ0 848 aaKnown RBP9.77□□□□□ -0.85
CTNND1-225ENST00000530094 PIBF1Q8WXW3 757 aa9.77□□□□□ -0.85
CTNND1-225ENST00000530094 FEZ1Q99689 392 aa9.77□□□□□ -0.85
CTNND1-225ENST00000530094 LGR6Q9HBX8 967 aa9.77□□□□□ -0.85
CTNND1-225ENST00000530094 TRPC5Q9UL62 973 aaPredicted RBP9.77□□□□□ -0.85
CTNND1-225ENST00000530094 IQSEC3Q9UPP2 1182 aaPredicted RBP9.77□□□□□ -0.85
CTNND1-225ENST00000530094 CFAP100Q494V2 611 aa9.77□□□□□ -0.85
CTNND1-225ENST00000530094 NYXQ9GZU5 481 aa9.77□□□□□ -0.85
CTNND1-225ENST00000530094 KAT14Q9H8E8 782 aa9.77□□□□□ -0.85
CTNND1-225ENST00000530094 KSR2Q6VAB6 950 aa9.76□□□□□ -0.85
CTNND1-225ENST00000530094 TCP11L1Q9NUJ3 509 aa9.76□□□□□ -0.85
CTNND1-225ENST00000530094 USO1O60763 962 aaKnown RBP9.76□□□□□ -0.85
CTNND1-225ENST00000530094 IL13P35225 146 aa9.76□□□□□ -0.85
CTNND1-225ENST00000530094 MAP9Q49MG5 647 aa9.76□□□□□ -0.85
CTNND1-225ENST00000530094 FERMT2Q96AC1 680 aa9.76□□□□□ -0.85
CTNND1-225ENST00000530094 FERMT1Q9BQL6 677 aa9.76□□□□□ -0.85
CTNND1-225ENST00000530094 B4DLN1 442 aa9.76□□□□□ -0.85
CTNND1-225ENST00000530094 MRPL12P52815 198 aaKnown RBP9.76□□□□□ -0.85
CTNND1-225ENST00000530094 ABCC3O15438 1527 aa9.76□□□□□ -0.85
CTNND1-225ENST00000530094 PARD3Q8TEW0 1356 aa9.76□□□□□ -0.85
CTNND1-225ENST00000530094 GCC2Q8IWJ2 1684 aa9.76□□□□□ -0.85
CTNND1-225ENST00000530094 CCDC183Q5T5S1 534 aa9.76□□□□□ -0.85
CTNND1-225ENST00000530094 LMBR1LQ6UX01 489 aa9.76□□□□□ -0.85
CTNND1-225ENST00000530094 DDX11Q96FC9 970 aa9.76□□□□□ -0.85
CTNND1-225ENST00000530094 F8W031 263 aaPredicted RBP9.76□□□□□ -0.85
CTNND1-225ENST00000530094 ZFYP08048 801 aaPredicted RBP9.76□□□□□ -0.85
CTNND1-225ENST00000530094 ZNF790Q6PG37 636 aa9.76□□□□□ -0.85
CTNND1-225ENST00000530094 GRPEL1Q9HAV7 217 aa9.76□□□□□ -0.85
CTNND1-225ENST00000530094 ECHDC1Q9NTX5 307 aa9.76□□□□□ -0.85
CTNND1-225ENST00000530094 LIMCH1Q9UPQ0 1083 aa9.76□□□□□ -0.85
CTNND1-225ENST00000530094 BMP15O95972 392 aa9.75□□□□□ -0.85
CTNND1-225ENST00000530094 FAM182BQ5T319 152 aa9.75□□□□□ -0.85
CTNND1-225ENST00000530094 TSPYL6Q8N831 410 aa9.75□□□□□ -0.85
CTNND1-225ENST00000530094 ERMNQ8TAM6 284 aa9.75□□□□□ -0.85
CTNND1-225ENST00000530094 KIAA0232Q92628 1395 aa9.75□□□□□ -0.85
CTNND1-225ENST00000530094 RXRBP28702 533 aa9.75□□□□□ -0.85
CTNND1-225ENST00000530094 SLC4A8Q2Y0W8 1093 aa9.75□□□□□ -0.85
CTNND1-225ENST00000530094 USP37Q86T82 979 aa9.75□□□□□ -0.85
CTNND1-225ENST00000530094 TAX1BP1Q86VP1 789 aa9.75□□□□□ -0.85
CTNND1-225ENST00000530094 DRC1Q96MC2 740 aa9.75□□□□□ -0.85
CTNND1-225ENST00000530094 PRDM15P57071 1507 aaPredicted RBP9.75□□□□□ -0.85
CTNND1-225ENST00000530094 GRM8O00222 908 aa9.75□□□□□ -0.85
CTNND1-225ENST00000530094 KIF5CO60282 957 aa9.75□□□□□ -0.85
CTNND1-225ENST00000530094 YEATS4O95619 227 aa9.75□□□□□ -0.85
CTNND1-225ENST00000530094 PDCL2Q8N4E4 241 aa9.75□□□□□ -0.85
CTNND1-225ENST00000530094 CLEC11AQ9Y240 323 aa9.75□□□□□ -0.85
CTNND1-225ENST00000530094 NEMFO60524 1076 aa9.74□□□□□ -0.85
CTNND1-225ENST00000530094 CCDC172P0C7W6 258 aa9.74□□□□□ -0.85
CTNND1-225ENST00000530094 CWF19L2Q2TBE0 894 aaKnown RBP9.74□□□□□ -0.85
CTNND1-225ENST00000530094 TMTC2Q8N394 836 aa9.74□□□□□ -0.85
CTNND1-225ENST00000530094 KRT23Q9C075 422 aa9.74□□□□□ -0.85
CTNND1-225ENST00000530094 NSFL1CQ9UNZ2 370 aaKnown RBP9.74□□□□□ -0.85
CTNND1-225ENST00000530094 GOLIM4O00461 696 aa9.74□□□□□ -0.85
CTNND1-225ENST00000530094 IRS4O14654 1257 aaPredicted RBP9.74□□□□□ -0.85
CTNND1-225ENST00000530094 SFPQP23246 707 aaKnown RBP eCLIP9.74□□□□□ -0.851e-8■■■□□ 15.1
CTNND1-225ENST00000530094 WDR78Q5VTH9 848 aa9.74□□□□□ -0.85
CTNND1-225ENST00000530094 MFSD6Q6ZSS7 791 aa9.74□□□□□ -0.85
CTNND1-225ENST00000530094 MEIS3Q99687 375 aa9.74□□□□□ -0.85
CTNND1-225ENST00000530094 TAOK3Q9H2K8 898 aa9.74□□□□□ -0.85
CTNND1-225ENST00000530094 INCENPQ9NQS7 918 aa9.74□□□□□ -0.85
CTNND1-225ENST00000530094 ZNF772Q68DY9 489 aaPredicted RBP9.74□□□□□ -0.85
CTNND1-225ENST00000530094 NCOA7Q8NI08 942 aa9.74□□□□□ -0.85
CTNND1-225ENST00000530094 DDX12PQ92771 950 aa9.74□□□□□ -0.85
CTNND1-225ENST00000530094 CCDC97Q96F63 343 aaPredicted RBP9.74□□□□□ -0.85
CTNND1-225ENST00000530094 DDX19AQ9NUU7 478 aaKnown RBP9.74□□□□□ -0.85
CTNND1-225ENST00000530094 CDC42BPAQ5VT25 1732 aa9.74□□□□□ -0.85
CTNND1-225ENST00000530094 LRRC45Q96CN5 670 aa9.74□□□□□ -0.85
CTNND1-225ENST00000530094 CNNM2Q9H8M5 875 aa9.74□□□□□ -0.85
CTNND1-225ENST00000530094 GCOM1H8Y6P7 765 aaPredicted RBP9.74□□□□□ -0.85
CTNND1-225ENST00000530094 STAMBPO95630 424 aa9.74□□□□□ -0.85
CTNND1-225ENST00000530094 MYZAPP0CAP1 466 aa9.74□□□□□ -0.85
CTNND1-225ENST00000530094 GRM1Q13255 1194 aa9.74□□□□□ -0.85
CTNND1-225ENST00000530094 DNAJC10Q8IXB1 793 aa9.74□□□□□ -0.85
CTNND1-225ENST00000530094 CNBD1Q8NA66 436 aa9.74□□□□□ -0.85
CTNND1-225ENST00000530094 UBA5Q9GZZ9 404 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms