RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 PHACTR3Q96KR7 559 aa4.74□□□□□ -1.65
PTPRC-213ENST00000529828 PCGF6Q9BYE7 350 aa4.74□□□□□ -1.65
PTPRC-213ENST00000529828 ZNF408Q9H9D4 720 aa4.74□□□□□ -1.65
PTPRC-213ENST00000529828 ZNF652Q9Y2D9 606 aa4.74□□□□□ -1.65
PTPRC-213ENST00000529828 COL3A1P02461 1466 aaPredicted RBP4.74□□□□□ -1.65
PTPRC-213ENST00000529828 PDE4DIPQ5VU43 2346 aa4.74□□□□□ -1.65
PTPRC-213ENST00000529828 SIPA1L3O60292 1781 aaPredicted RBP4.74□□□□□ -1.65
PTPRC-213ENST00000529828 KLRG2A4D1S0 409 aaPredicted RBP4.74□□□□□ -1.65
PTPRC-213ENST00000529828 GPTP24298 496 aa4.74□□□□□ -1.65
PTPRC-213ENST00000529828 ECE1P42892 770 aa4.74□□□□□ -1.65
PTPRC-213ENST00000529828 DCTN1Q14203 1278 aa4.74□□□□□ -1.65
PTPRC-213ENST00000529828 TPTE2Q6XPS3 522 aa4.74□□□□□ -1.65
PTPRC-213ENST00000529828 ERICH6Q7L0X2 663 aa4.74□□□□□ -1.65
PTPRC-213ENST00000529828 IFNL1Q8IU54 200 aa4.74□□□□□ -1.65
PTPRC-213ENST00000529828 GLIS2Q9BZE0 524 aaPredicted RBP4.74□□□□□ -1.65
PTPRC-213ENST00000529828 THSD7BQ9C0I4 1608 aa4.74□□□□□ -1.65
PTPRC-213ENST00000529828 SNED1Q8TER0 1413 aa4.73□□□□□ -1.65
PTPRC-213ENST00000529828 CEMIPQ8WUJ3 1361 aa4.73□□□□□ -1.65
PTPRC-213ENST00000529828 MKI67P46013 3256 aaKnown RBP4.73□□□□□ -1.65
PTPRC-213ENST00000529828 CELF2O95319 508 aaKnown RBP4.73□□□□□ -1.65
PTPRC-213ENST00000529828 PRKAR2BP31323 418 aa4.73□□□□□ -1.65
PTPRC-213ENST00000529828 DGKZQ13574 1117 aa4.73□□□□□ -1.65
PTPRC-213ENST00000529828 DLK2Q6UY11 383 aa4.73□□□□□ -1.65
PTPRC-213ENST00000529828 ZIC5Q96T25 663 aa4.73□□□□□ -1.65
PTPRC-213ENST00000529828 MIS18AQ9NYP9 233 aa4.73□□□□□ -1.65
PTPRC-213ENST00000529828 TLL2Q9Y6L7 1015 aa4.73□□□□□ -1.65
PTPRC-213ENST00000529828 KIF7Q2M1P5 1343 aa4.73□□□□□ -1.65
PTPRC-213ENST00000529828 FAM205CA6NFA0 338 aa4.73□□□□□ -1.65
PTPRC-213ENST00000529828 PPIP5K2O43314 1243 aa4.73□□□□□ -1.65
PTPRC-213ENST00000529828 SNRPA1P09661 255 aaKnown RBP4.73□□□□□ -1.65
PTPRC-213ENST00000529828 ALDH1B1P30837 517 aa4.73□□□□□ -1.65
PTPRC-213ENST00000529828 RGS19P49795 217 aa4.73□□□□□ -1.65
PTPRC-213ENST00000529828 SOX10P56693 466 aa4.73□□□□□ -1.65
PTPRC-213ENST00000529828 AOC3Q16853 763 aa4.73□□□□□ -1.65
PTPRC-213ENST00000529828 CIAPIN1Q6FI81 312 aa4.73□□□□□ -1.65
PTPRC-213ENST00000529828 CLEC4GQ6UXB4 293 aa4.73□□□□□ -1.65
PTPRC-213ENST00000529828 RPGRQ92834 1020 aaKnown RBP4.73□□□□□ -1.65
PTPRC-213ENST00000529828 RNF166Q96A37 237 aaPredicted RBP4.73□□□□□ -1.65
PTPRC-213ENST00000529828 FAM212AQ96EL1 285 aa4.73□□□□□ -1.65
PTPRC-213ENST00000529828 PSMD1Q99460 953 aa4.73□□□□□ -1.65
PTPRC-213ENST00000529828 BRCA2P51587 3418 aa4.72□□□□□ -1.65
PTPRC-213ENST00000529828 SHTN1A0MZ66 631 aa4.72□□□□□ -1.65
PTPRC-213ENST00000529828 PPEF1O14829 653 aaPredicted RBP4.72□□□□□ -1.65
PTPRC-213ENST00000529828 GMPSP49915 693 aaPredicted RBP4.72□□□□□ -1.65
PTPRC-213ENST00000529828 TTLL7Q6ZT98 887 aa4.72□□□□□ -1.65
PTPRC-213ENST00000529828 USP50Q70EL3 339 aaPredicted RBP4.72□□□□□ -1.65
PTPRC-213ENST00000529828 SAPCD2Q86UD0 394 aa4.72□□□□□ -1.65
PTPRC-213ENST00000529828 NIM1KQ8IY84 436 aa4.72□□□□□ -1.65
PTPRC-213ENST00000529828 TRPM4Q8TD43 1214 aa4.72□□□□□ -1.65
PTPRC-213ENST00000529828 ZBTB3Q9H5J0 574 aa4.72□□□□□ -1.65
PTPRC-213ENST00000529828 CENPFP49454 3210 aa4.72□□□□□ -1.65
PTPRC-213ENST00000529828 UBN2Q6ZU65 1347 aa4.72□□□□□ -1.65
PTPRC-213ENST00000529828 MYL6BP14649 208 aa4.72□□□□□ -1.65
PTPRC-213ENST00000529828 CRY2Q49AN0 593 aa4.72□□□□□ -1.65
PTPRC-213ENST00000529828 RTF1Q92541 710 aaKnown RBP4.72□□□□□ -1.65
PTPRC-213ENST00000529828 ZNF428Q96B54 188 aa4.72□□□□□ -1.65
PTPRC-213ENST00000529828 RSPH6AQ9H0K4 717 aa4.72□□□□□ -1.65
PTPRC-213ENST00000529828 ADARB2Q9NS39 739 aaKnown RBP4.72□□□□□ -1.65
PTPRC-213ENST00000529828 TIMELESSQ9UNS1 1208 aa4.72□□□□□ -1.65
PTPRC-213ENST00000529828 RRP7AQ9Y3A4 280 aaKnown RBP4.72□□□□□ -1.65
PTPRC-213ENST00000529828 CASP8AP2Q9UKL3 1982 aa4.72□□□□□ -1.65
PTPRC-213ENST00000529828 NPC1L1Q9UHC9 1359 aa4.71□□□□□ -1.65
PTPRC-213ENST00000529828 RAD17O75943 681 aa4.71□□□□□ -1.66
PTPRC-213ENST00000529828 MAP2K2P36507 400 aa4.71□□□□□ -1.66
PTPRC-213ENST00000529828 SUSD4Q5VX71 490 aa4.71□□□□□ -1.66
PTPRC-213ENST00000529828 RBM17Q96I25 401 aaKnown RBP4.71□□□□□ -1.66
PTPRC-213ENST00000529828 GPRC5DQ9NZD1 345 aa4.71□□□□□ -1.66
PTPRC-213ENST00000529828 PER1O15534 1290 aaPredicted RBP4.71□□□□□ -1.66
PTPRC-213ENST00000529828 U2AF1L5P0DN76 240 aaPredicted RBP4.71□□□□□ -1.66
PTPRC-213ENST00000529828 HIRAP54198 1017 aaPredicted RBP4.71□□□□□ -1.66
PTPRC-213ENST00000529828 BRPF1P55201 1214 aaPredicted RBP4.71□□□□□ -1.66
PTPRC-213ENST00000529828 HUNKP57058 714 aa4.71□□□□□ -1.66
PTPRC-213ENST00000529828 U2AF1Q01081 240 aaKnown RBP eCLIP4.71□□□□□ -1.66
PTPRC-213ENST00000529828 CXCL9Q07325 125 aa4.71□□□□□ -1.66
PTPRC-213ENST00000529828 TRIM26Q12899 539 aaPredicted RBP4.71□□□□□ -1.66
PTPRC-213ENST00000529828 BCL2L13Q9BXK5 485 aa4.71□□□□□ -1.66
PTPRC-213ENST00000529828 NYXQ9GZU5 481 aa4.71□□□□□ -1.66
PTPRC-213ENST00000529828 MAP3K15Q6ZN16 1313 aa4.7□□□□□ -1.66
PTPRC-213ENST00000529828 HTTP42858 3142 aa4.7□□□□□ -1.66
PTPRC-213ENST00000529828 RIC1Q4ADV7 1423 aa4.7□□□□□ -1.66
PTPRC-213ENST00000529828 NTSR2O95665 410 aa4.7□□□□□ -1.66
PTPRC-213ENST00000529828 CC2D2BQ6DHV5 1058 aa4.7□□□□□ -1.66
PTPRC-213ENST00000529828 KIF6Q6ZMV9 814 aa4.7□□□□□ -1.66
PTPRC-213ENST00000529828 USP48Q86UV5 1035 aa4.7□□□□□ -1.66
PTPRC-213ENST00000529828 TRPM7Q96QT4 1865 aa4.7□□□□□ -1.66
PTPRC-213ENST00000529828 ABCC4O15439 1325 aa4.7□□□□□ -1.66
PTPRC-213ENST00000529828 ADM5C9JUS6 153 aa4.69□□□□□ -1.66
PTPRC-213ENST00000529828 CA12O43570 354 aa4.69□□□□□ -1.66
PTPRC-213ENST00000529828 HOXA10P31260 410 aaPredicted RBP4.69□□□□□ -1.66
PTPRC-213ENST00000529828 XP32Q5T750 250 aa4.69□□□□□ -1.66
PTPRC-213ENST00000529828 DPP8Q6V1X1 898 aaPredicted RBP4.69□□□□□ -1.66
PTPRC-213ENST00000529828 THUMPD2Q9BTF0 503 aaKnown RBP4.69□□□□□ -1.66
PTPRC-213ENST00000529828 ZNRF3Q9ULT6 936 aa4.69□□□□□ -1.66
PTPRC-213ENST00000529828 TRPA1O75762 1119 aa4.69□□□□□ -1.66
PTPRC-213ENST00000529828 EGFRP00533 1210 aa4.69□□□□□ -1.66
PTPRC-213ENST00000529828 ANXA1P04083 346 aa4.69□□□□□ -1.66
PTPRC-213ENST00000529828 TBC1D10BQ4KMP7 808 aaPredicted RBP4.69□□□□□ -1.66
PTPRC-213ENST00000529828 RBM26Q5T8P6 1007 aaKnown RBP4.69□□□□□ -1.66
PTPRC-213ENST00000529828 SAMD7Q7Z3H4 446 aa4.69□□□□□ -1.66
PTPRC-213ENST00000529828 MICALL2Q8IY33 904 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms