RNA–Protein interactions for RNA: ENST00000529565.1

CASP4-207, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 4,745 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-207ENST00000529565 PDE8AO60658 829 aa5.49□□□□□ -1.53
CASP4-207ENST00000529565 ZNF853P0CG23 659 aa5.49□□□□□ -1.53
CASP4-207ENST00000529565 MCM4P33991 863 aa5.49□□□□□ -1.53
CASP4-207ENST00000529565 ATP2B2Q01814 1243 aa5.49□□□□□ -1.53
CASP4-207ENST00000529565 GCKRQ14397 625 aa5.49□□□□□ -1.53
CASP4-207ENST00000529565 CCDC178Q5BJE1 867 aa5.49□□□□□ -1.53
CASP4-207ENST00000529565 CAVIN1Q6NZI2 390 aaKnown RBP5.49□□□□□ -1.53
CASP4-207ENST00000529565 BRINP3Q76B58 766 aa5.49□□□□□ -1.53
CASP4-207ENST00000529565 SKAP1Q86WV1 359 aa5.49□□□□□ -1.53
CASP4-207ENST00000529565 ZNF444Q8N0Y2 327 aaPredicted RBP5.49□□□□□ -1.53
CASP4-207ENST00000529565 NCOA7Q8NI08 942 aa5.49□□□□□ -1.53
CASP4-207ENST00000529565 CTCFLQ8NI51 663 aaPredicted RBP5.49□□□□□ -1.53
CASP4-207ENST00000529565 NEK1Q96PY6 1258 aa5.49□□□□□ -1.53
CASP4-207ENST00000529565 SNRKQ9NRH2 765 aa5.49□□□□□ -1.53
CASP4-207ENST00000529565 PA2G4Q9UQ80 394 aaKnown RBP5.49□□□□□ -1.53
CASP4-207ENST00000529565 PTPRMP28827 1452 aa5.49□□□□□ -1.53
CASP4-207ENST00000529565 PREX1Q8TCU6 1659 aa5.49□□□□□ -1.53
CASP4-207ENST00000529565 KDRP35968 1356 aa5.49□□□□□ -1.53
CASP4-207ENST00000529565 PDE4BQ07343 736 aa5.49□□□□□ -1.53
CASP4-207ENST00000529565 DNAJC10Q8IXB1 793 aa5.49□□□□□ -1.53
CASP4-207ENST00000529565 TBC1D2Q9BYX2 928 aa5.49□□□□□ -1.53
CASP4-207ENST00000529565 FAM13BQ9NYF5 915 aa5.49□□□□□ -1.53
CASP4-207ENST00000529565 CEP131Q9UPN4 1083 aa5.49□□□□□ -1.53
CASP4-207ENST00000529565 CPSF1Q10570 1443 aaKnown RBP5.49□□□□□ -1.53
CASP4-207ENST00000529565 GNPATO15228 680 aa5.49□□□□□ -1.53
CASP4-207ENST00000529565 GNAT2P19087 354 aa5.49□□□□□ -1.53
CASP4-207ENST00000529565 DHX8Q14562 1220 aaKnown RBP5.49□□□□□ -1.53
CASP4-207ENST00000529565 FAM98CQ17RN3 349 aaKnown RBP5.49□□□□□ -1.53
CASP4-207ENST00000529565 PPP4R3BQ5MIZ7 849 aa5.49□□□□□ -1.53
CASP4-207ENST00000529565 ZNF804AQ7Z570 1209 aa5.49□□□□□ -1.53
CASP4-207ENST00000529565 CCDC83Q8IWF9 413 aa5.49□□□□□ -1.53
CASP4-207ENST00000529565 CDK5RAP3Q96JB5 506 aa5.49□□□□□ -1.53
CASP4-207ENST00000529565 SPATA32Q96LK8 384 aa5.49□□□□□ -1.53
CASP4-207ENST00000529565 TSPY26PQ9H489 355 aa5.49□□□□□ -1.53
CASP4-207ENST00000529565 PAG1Q9NWQ8 432 aa5.49□□□□□ -1.53
CASP4-207ENST00000529565 SLC12A7Q9Y666 1083 aa5.49□□□□□ -1.53
CASP4-207ENST00000529565 KDM2BQ8NHM5 1336 aa5.49□□□□□ -1.53
CASP4-207ENST00000529565 IPO7O95373 1038 aaKnown RBP5.49□□□□□ -1.53
CASP4-207ENST00000529565 A1BGP04217 495 aa5.49□□□□□ -1.53
CASP4-207ENST00000529565 ATP2B1P20020 1258 aa5.49□□□□□ -1.53
CASP4-207ENST00000529565 ME1P48163 572 aa5.49□□□□□ -1.53
CASP4-207ENST00000529565 CRACR2BQ8N4Y2 399 aaPredicted RBP5.49□□□□□ -1.53
CASP4-207ENST00000529565 SCAND2PQ9GZW5 306 aaPredicted RBP5.49□□□□□ -1.53
CASP4-207ENST00000529565 CNNM2Q9H8M5 875 aa5.49□□□□□ -1.53
CASP4-207ENST00000529565 PNPLA6Q8IY17 1366 aa5.48□□□□□ -1.53
CASP4-207ENST00000529565 IFIT3O14879 490 aaKnown RBP5.48□□□□□ -1.53
CASP4-207ENST00000529565 RNF113AO15541 343 aaKnown RBP5.48□□□□□ -1.53
CASP4-207ENST00000529565 TFCP2Q12800 502 aa5.48□□□□□ -1.53
CASP4-207ENST00000529565 TCIRG1Q13488 830 aa5.48□□□□□ -1.53
CASP4-207ENST00000529565 STK11IPQ8N1F8 1099 aa5.48□□□□□ -1.53
CASP4-207ENST00000529565 TMTC2Q8N394 836 aa5.48□□□□□ -1.53
CASP4-207ENST00000529565 SNX21Q969T3 373 aa5.48□□□□□ -1.53
CASP4-207ENST00000529565 ARID3AQ99856 593 aa5.48□□□□□ -1.53
CASP4-207ENST00000529565 KRT23Q9C075 422 aa5.48□□□□□ -1.53
CASP4-207ENST00000529565 TFCP2L1Q9NZI6 479 aa5.48□□□□□ -1.53
CASP4-207ENST00000529565 THRAP3Q9Y2W1 955 aaKnown RBP5.48□□□□□ -1.53
CASP4-207ENST00000529565 PARP3Q9Y6F1 533 aa5.48□□□□□ -1.53
CASP4-207ENST00000529565 TECPR2O15040 1411 aa5.48□□□□□ -1.53
CASP4-207ENST00000529565 KAT6BQ8WYB5 2073 aa5.48□□□□□ -1.53
CASP4-207ENST00000529565 TNS3Q68CZ2 1445 aa5.48□□□□□ -1.53
CASP4-207ENST00000529565 ADAMTS13Q76LX8 1427 aa5.48□□□□□ -1.53
CASP4-207ENST00000529565 CCDC192P0DO97 292 aa5.48□□□□□ -1.53
CASP4-207ENST00000529565 MCM5P33992 734 aa5.48□□□□□ -1.53
CASP4-207ENST00000529565 NBPF14Q5TI25 921 aa5.48□□□□□ -1.53
CASP4-207ENST00000529565 TSHZ3Q63HK5 1081 aa5.48□□□□□ -1.53
CASP4-207ENST00000529565 MFSD6Q6ZSS7 791 aa5.48□□□□□ -1.53
CASP4-207ENST00000529565 CATIPQ7Z7H3 387 aa5.48□□□□□ -1.53
CASP4-207ENST00000529565 ZNF622Q969S3 477 aaKnown RBP eCLIP5.48□□□□□ -1.53
CASP4-207ENST00000529565 DACH1Q9UI36 760 aa5.48□□□□□ -1.53
CASP4-207ENST00000529565 EPB41L2O43491 1005 aaKnown RBP5.48□□□□□ -1.53
CASP4-207ENST00000529565 RANBP6O60518 1105 aaKnown RBP5.48□□□□□ -1.53
CASP4-207ENST00000529565 NASPP49321 788 aaPredicted RBP5.48□□□□□ -1.53
CASP4-207ENST00000529565 C8orf34Q49A92 452 aa5.48□□□□□ -1.53
CASP4-207ENST00000529565 NEURL1BA8MQ27 555 aa5.48□□□□□ -1.53
CASP4-207ENST00000529565 HLA-DOAP06340 250 aa5.48□□□□□ -1.53
CASP4-207ENST00000529565 PLCG2P16885 1265 aa5.48□□□□□ -1.53
CASP4-207ENST00000529565 CYP7A1P22680 504 aa5.48□□□□□ -1.53
CASP4-207ENST00000529565 KIF5BP33176 963 aa5.48□□□□□ -1.53
CASP4-207ENST00000529565 C16orf71Q8IYS4 520 aaPredicted RBP5.48□□□□□ -1.53
CASP4-207ENST00000529565 RBM17Q96I25 401 aaKnown RBP5.48□□□□□ -1.53
CASP4-207ENST00000529565 C8orf76Q96K31 380 aa5.48□□□□□ -1.53
CASP4-207ENST00000529565 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.48□□□□□ -1.53
CASP4-207ENST00000529565 SEC63Q9UGP8 760 aaKnown RBP5.48□□□□□ -1.53
CASP4-207ENST00000529565 RBM8AQ9Y5S9 174 aaKnown RBP5.48□□□□□ -1.53
CASP4-207ENST00000529565 DIP2AQ14689 1571 aa5.47□□□□□ -1.53
CASP4-207ENST00000529565 GOLGA8AA7E2F4 631 aa5.47□□□□□ -1.53
CASP4-207ENST00000529565 GOLGA8BA8MQT2 603 aa5.47□□□□□ -1.53
CASP4-207ENST00000529565 NAA16Q6N069 864 aaPredicted RBP5.47□□□□□ -1.53
CASP4-207ENST00000529565 CNBD1Q8NA66 436 aa5.47□□□□□ -1.53
CASP4-207ENST00000529565 SSH3Q8TE77 659 aa5.47□□□□□ -1.53
CASP4-207ENST00000529565 EYA3Q99504 573 aa5.47□□□□□ -1.53
CASP4-207ENST00000529565 TNMDQ9H2S6 317 aa5.47□□□□□ -1.53
CASP4-207ENST00000529565 HELLSQ9NRZ9 838 aa5.47□□□□□ -1.53
CASP4-207ENST00000529565 TRPC5Q9UL62 973 aaPredicted RBP5.47□□□□□ -1.53
CASP4-207ENST00000529565 REREQ9P2R6 1566 aa5.47□□□□□ -1.53
CASP4-207ENST00000529565 ITGA6P23229 1130 aa5.47□□□□□ -1.53
CASP4-207ENST00000529565 CHMLP26374 656 aa5.47□□□□□ -1.53
CASP4-207ENST00000529565 SSRP1Q08945 709 aaKnown RBP5.47□□□□□ -1.53
CASP4-207ENST00000529565 PUM3Q15397 648 aaKnown RBP5.47□□□□□ -1.53
CASP4-207ENST00000529565 TNNI3KQ59H18 835 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms