RNA–Protein interactions for RNA: ENST00000529472.1

CHD7-209, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 788 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-209ENST00000529472 PDZRN3Q9UPQ7 1066 aa14.35□□□□□ -0.11
CHD7-209ENST00000529472 BRCA1P38398 1863 aaKnown RBP14.35□□□□□ -0.11
CHD7-209ENST00000529472 NPR1P16066 1061 aa14.34□□□□□ -0.11
CHD7-209ENST00000529472 KCNA3P22001 575 aa14.34□□□□□ -0.11
CHD7-209ENST00000529472 EPHA10Q5JZY3 1008 aa14.34□□□□□ -0.11
CHD7-209ENST00000529472 MASTLQ96GX5 879 aa14.34□□□□□ -0.11
CHD7-209ENST00000529472 PLA2G12BQ9BX93 195 aa14.34□□□□□ -0.11
CHD7-209ENST00000529472 CHMP3Q9Y3E7 222 aa14.34□□□□□ -0.11
CHD7-209ENST00000529472 TAF1P21675 1872 aa14.33□□□□□ -0.11
CHD7-209ENST00000529472 GNAI3P08754 354 aa14.33□□□□□ -0.12
CHD7-209ENST00000529472 FOXO4P98177 505 aa14.33□□□□□ -0.12
CHD7-209ENST00000529472 CCDC152Q4G0S7 254 aa14.33□□□□□ -0.12
CHD7-209ENST00000529472 STYK1Q6J9G0 422 aa14.33□□□□□ -0.12
CHD7-209ENST00000529472 RBM17Q96I25 401 aaKnown RBP14.33□□□□□ -0.12
CHD7-209ENST00000529472 KAZALD1Q96I82 304 aa14.33□□□□□ -0.12
CHD7-209ENST00000529472 BICC1Q9H694 974 aaKnown RBP14.33□□□□□ -0.12
CHD7-209ENST00000529472 LRRFIP2Q9Y608 721 aaKnown RBP14.33□□□□□ -0.12
CHD7-209ENST00000529472 SF3B3Q15393 1217 aaKnown RBP14.32□□□□□ -0.12
CHD7-209ENST00000529472 FAM161AQ3B820 660 aa14.32□□□□□ -0.12
CHD7-209ENST00000529472 LMBR1LQ6UX01 489 aa14.32□□□□□ -0.12
CHD7-209ENST00000529472 DDX46Q7L014 1031 aaKnown RBP14.32□□□□□ -0.12
CHD7-209ENST00000529472 PELP1Q8IZL8 1130 aaKnown RBP14.32□□□□□ -0.12
CHD7-209ENST00000529472 TTLL11Q8NHH1 800 aa14.32□□□□□ -0.12
CHD7-209ENST00000529472 GREM2Q9H772 168 aa14.32□□□□□ -0.12
CHD7-209ENST00000529472 PIM2Q9P1W9 311 aa14.32□□□□□ -0.12
CHD7-209ENST00000529472 DDX19BQ9UMR2 479 aa14.32□□□□□ -0.12
CHD7-209ENST00000529472 ZBTB7BO15156 539 aaPredicted RBP14.31□□□□□ -0.12
CHD7-209ENST00000529472 HOXA10P31260 410 aaPredicted RBP14.31□□□□□ -0.12
CHD7-209ENST00000529472 DALRD3Q5D0E6 543 aaKnown RBP14.31□□□□□ -0.12
CHD7-209ENST00000529472 TTLL6Q8N841 843 aa14.31□□□□□ -0.12
CHD7-209ENST00000529472 ANKRD44Q8N8A2 993 aa14.31□□□□□ -0.12
CHD7-209ENST00000529472 C1orf115Q9H7X2 142 aa14.31□□□□□ -0.12
CHD7-209ENST00000529472 SPEF2Q9C093 1822 aa14.31□□□□□ -0.12
CHD7-209ENST00000529472 COL4A1P02462 1669 aa14.3□□□□□ -0.12
CHD7-209ENST00000529472 SLX4Q8IY92 1834 aa14.3□□□□□ -0.12
CHD7-209ENST00000529472 GNAI2P04899 355 aa14.3□□□□□ -0.12
CHD7-209ENST00000529472 PRPF40BQ6NWY9 871 aaKnown RBP14.3□□□□□ -0.12
CHD7-209ENST00000529472 CNKSR1Q969H4 720 aa14.3□□□□□ -0.12
CHD7-209ENST00000529472 CRBNQ96SW2 442 aa14.3□□□□□ -0.12
CHD7-209ENST00000529472 SEC31BQ9NQW1 1179 aa14.3□□□□□ -0.12
CHD7-209ENST00000529472 ZNF219Q9P2Y4 722 aaPredicted RBP14.3□□□□□ -0.12
CHD7-209ENST00000529472 HDAC5Q9UQL6 1122 aa14.3□□□□□ -0.12
CHD7-209ENST00000529472 BCS1LQ9Y276 419 aa14.3□□□□□ -0.12
CHD7-209ENST00000529472 CSF1RP07333 972 aa14.29□□□□□ -0.12
CHD7-209ENST00000529472 ITGA6P23229 1130 aa14.29□□□□□ -0.12
CHD7-209ENST00000529472 ALDH1B1P30837 517 aa14.29□□□□□ -0.12
CHD7-209ENST00000529472 IRX6P78412 446 aaPredicted RBP14.29□□□□□ -0.12
CHD7-209ENST00000529472 GRAPQ13588 217 aa14.29□□□□□ -0.12
CHD7-209ENST00000529472 GRAPLQ8TC17 118 aaPredicted RBP14.29□□□□□ -0.12
CHD7-209ENST00000529472 CRAMP1Q96RY5 1269 aa14.29□□□□□ -0.12
CHD7-209ENST00000529472 RTL9Q8NET4 1388 aa14.29□□□□□ -0.12
CHD7-209ENST00000529472 PPEF1O14829 653 aaPredicted RBP14.28□□□□□ -0.12
CHD7-209ENST00000529472 IFIT5Q13325 482 aaKnown RBP14.28□□□□□ -0.12
CHD7-209ENST00000529472 RABL6Q3YEC7 729 aaPredicted RBP14.28□□□□□ -0.12
CHD7-209ENST00000529472 CELF1Q92879 486 aaKnown RBP14.28□□□□□ -0.12
CHD7-209ENST00000529472 ARFGEF1Q9Y6D6 1849 aa14.27□□□□□ -0.12
CHD7-209ENST00000529472 ANKRD18BA2A2Z9 1011 aa14.27□□□□□ -0.13
CHD7-209ENST00000529472 C21orf2O43822 256 aa14.27□□□□□ -0.13
CHD7-209ENST00000529472 YBX3P16989 372 aaKnown RBP eCLIP14.27□□□□□ -0.13
CHD7-209ENST00000529472 CCDC57Q2TAC2 916 aa14.27□□□□□ -0.13
CHD7-209ENST00000529472 TAF7LQ5H9L4 462 aa14.27□□□□□ -0.13
CHD7-209ENST00000529472 SLC51AQ86UW1 340 aa14.27□□□□□ -0.13
CHD7-209ENST00000529472 CDC5LQ99459 802 aaKnown RBP14.27□□□□□ -0.13
CHD7-209ENST00000529472 CHMP4BQ9H444 224 aaKnown RBP14.27□□□□□ -0.13
CHD7-209ENST00000529472 ZBTB40Q9NUA8 1239 aa14.27□□□□□ -0.13
CHD7-209ENST00000529472 GPR162Q16538 588 aa14.26□□□□□ -0.13
CHD7-209ENST00000529472 OLFM4Q6UX06 510 aa14.26□□□□□ -0.13
CHD7-209ENST00000529472 ANKRD18AQ8IVF6 992 aa14.26□□□□□ -0.13
CHD7-209ENST00000529472 SRGAP3O43295 1099 aa14.25□□□□□ -0.13
CHD7-209ENST00000529472 BBOX1O75936 387 aa14.25□□□□□ -0.13
CHD7-209ENST00000529472 IGHMBP2P38935 993 aaKnown RBP14.25□□□□□ -0.13
CHD7-209ENST00000529472 RPS8P62241 208 aaKnown RBP14.25□□□□□ -0.13
CHD7-209ENST00000529472 KLHDC4Q8TBB5 520 aa14.25□□□□□ -0.13
CHD7-209ENST00000529472 ZNF594Q96JF6 807 aaPredicted RBP14.25□□□□□ -0.13
CHD7-209ENST00000529472 MPHOSPH8Q99549 860 aa14.24□□□□□ -0.13
CHD7-209ENST00000529472 LRRC37AA6NMS7 1700 aa14.24□□□□□ -0.13
CHD7-209ENST00000529472 PNMA6EA0A0J9YXQ4 647 aa14.23□□□□□ -0.13
CHD7-209ENST00000529472 MTX1Q13505 466 aa14.23□□□□□ -0.13
CHD7-209ENST00000529472 CEP85Q6P2H3 762 aa14.23□□□□□ -0.13
CHD7-209ENST00000529472 EXOC6Q8TAG9 804 aa14.23□□□□□ -0.13
CHD7-209ENST00000529472 C7orf43Q8WVR3 580 aa14.23□□□□□ -0.13
CHD7-209ENST00000529472 TMX4Q9H1E5 349 aaPredicted RBP14.23□□□□□ -0.13
CHD7-209ENST00000529472 ATP6V0A2Q9Y487 856 aa14.23□□□□□ -0.13
CHD7-209ENST00000529472 RFX5P48382 616 aaPredicted RBP14.22□□□□□ -0.13
CHD7-209ENST00000529472 CCDC93Q567U6 631 aa14.22□□□□□ -0.13
CHD7-209ENST00000529472 SOGA3Q5TF21 947 aa14.22□□□□□ -0.13
CHD7-209ENST00000529472 TMC4Q7Z404 712 aa14.22□□□□□ -0.13
CHD7-209ENST00000529472 SIL1Q9H173 461 aa14.22□□□□□ -0.13
CHD7-209ENST00000529472 CNNM1Q9NRU3 951 aa14.22□□□□□ -0.13
CHD7-209ENST00000529472 BSDC1Q9NW68 430 aaPredicted RBP14.22□□□□□ -0.13
CHD7-209ENST00000529472 DCAF8L1A6NGE4 600 aa14.21□□□□□ -0.13
CHD7-209ENST00000529472 LDHAL6AQ6ZMR3 332 aa14.21□□□□□ -0.13
CHD7-209ENST00000529472 ARHGAP27Q6ZUM4 889 aa14.21□□□□□ -0.13
CHD7-209ENST00000529472 SP8Q8IXZ3 490 aa14.21□□□□□ -0.13
CHD7-209ENST00000529472 PA2G4Q9UQ80 394 aaKnown RBP14.21□□□□□ -0.13
CHD7-209ENST00000529472 A0A1B0GUL6 1792 aa14.2□□□□□ -0.14
CHD7-209ENST00000529472 ATP8B2P98198 1209 aa14.2□□□□□ -0.14
CHD7-209ENST00000529472 PTPN12Q05209 780 aaKnown RBP14.2□□□□□ -0.14
CHD7-209ENST00000529472 PUS3Q9BZE2 481 aaKnown RBP14.2□□□□□ -0.14
CHD7-209ENST00000529472 FER1L6Q2WGJ9 1857 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms