RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 EIF6P56537 245 aaKnown RBP18.23■□□□□ 0.51
CAPN1-216ENST00000528739 SF3B3Q15393 1217 aaKnown RBP18.23■□□□□ 0.51
CAPN1-216ENST00000528739 SUPT20HQ8NEM7 779 aa18.23■□□□□ 0.51
CAPN1-216ENST00000528739 DNAAF4Q8WXU2 420 aa18.23■□□□□ 0.51
CAPN1-216ENST00000528739 FER1L6Q2WGJ9 1857 aa18.22■□□□□ 0.51
CAPN1-216ENST00000528739 IGKV5-2P06315 115 aa18.22■□□□□ 0.51
CAPN1-216ENST00000528739 CCDC152Q4G0S7 254 aa18.22■□□□□ 0.51
CAPN1-216ENST00000528739 NIM1KQ8IY84 436 aa18.22■□□□□ 0.51
CAPN1-216ENST00000528739 CELF1Q92879 486 aaKnown RBP18.22■□□□□ 0.51
CAPN1-216ENST00000528739 GJA3Q9Y6H8 435 aa18.22■□□□□ 0.51
CAPN1-216ENST00000528739 ARFGEF2Q9Y6D5 1785 aa18.22■□□□□ 0.51
CAPN1-216ENST00000528739 CCDC88AQ3V6T2 1871 aa18.21■□□□□ 0.51
CAPN1-216ENST00000528739 NEURL1BA8MQ27 555 aa18.21■□□□□ 0.51
CAPN1-216ENST00000528739 AOC3Q16853 763 aa18.21■□□□□ 0.51
CAPN1-216ENST00000528739 TMC4Q7Z404 712 aa18.21■□□□□ 0.51
CAPN1-216ENST00000528739 RBM46Q8TBY0 533 aaKnown RBP18.21■□□□□ 0.51
CAPN1-216ENST00000528739 F6X3S4 739 aa18.2■□□□□ 0.5
CAPN1-216ENST00000528739 HSPA6P17066 643 aa18.2■□□□□ 0.5
CAPN1-216ENST00000528739 RPS8P62241 208 aaKnown RBP18.2■□□□□ 0.5
CAPN1-216ENST00000528739 SEC31BQ9NQW1 1179 aa18.2■□□□□ 0.5
CAPN1-216ENST00000528739 NSFL1CQ9UNZ2 370 aaKnown RBP18.2■□□□□ 0.5
CAPN1-216ENST00000528739 ZNF521Q96K83 1311 aa18.2■□□□□ 0.5
CAPN1-216ENST00000528739 ZNF541Q9H0D2 1346 aa18.2■□□□□ 0.5
CAPN1-216ENST00000528739 SLC4A10Q6U841 1118 aa18.19■□□□□ 0.5
CAPN1-216ENST00000528739 UBE3BQ7Z3V4 1068 aa18.19■□□□□ 0.5
CAPN1-216ENST00000528739 MIER1Q8N108 512 aa18.19■□□□□ 0.5
CAPN1-216ENST00000528739 SMC1BQ8NDV3 1235 aa18.19■□□□□ 0.5
CAPN1-216ENST00000528739 TIAM2Q8IVF5 1701 aa18.18■□□□□ 0.5
CAPN1-216ENST00000528739 IQCA1LA6NCM1 817 aa18.18■□□□□ 0.5
CAPN1-216ENST00000528739 C6orf229H3BNL8 230 aa18.18■□□□□ 0.5
CAPN1-216ENST00000528739 FZD9O00144 591 aa18.17■□□□□ 0.5
CAPN1-216ENST00000528739 SLFN5Q08AF3 891 aa18.17■□□□□ 0.5
CAPN1-216ENST00000528739 FSTL1Q12841 308 aa18.17■□□□□ 0.5
CAPN1-216ENST00000528739 GCKRQ14397 625 aa18.17■□□□□ 0.5
CAPN1-216ENST00000528739 ANKRD18AQ8IVF6 992 aa18.17■□□□□ 0.5
CAPN1-216ENST00000528739 LINS1Q8NG48 757 aa18.17■□□□□ 0.5
CAPN1-216ENST00000528739 CDCA7LQ96GN5 454 aa18.17■□□□□ 0.5
CAPN1-216ENST00000528739 CDHR2Q9BYE9 1310 aa18.17■□□□□ 0.5
CAPN1-216ENST00000528739 POTECB2RU33 542 aa18.16■□□□□ 0.5
CAPN1-216ENST00000528739 G3V3G9 751 aa18.16■□□□□ 0.5
CAPN1-216ENST00000528739 RIMBP2O15034 1052 aa18.16■□□□□ 0.5
CAPN1-216ENST00000528739 CTSWP56202 376 aa18.16■□□□□ 0.5
CAPN1-216ENST00000528739 EAPPQ56P03 285 aaPredicted RBP18.16■□□□□ 0.5
CAPN1-216ENST00000528739 DCAF8Q5TAQ9 597 aa18.16■□□□□ 0.5
CAPN1-216ENST00000528739 VPS33BQ9H267 617 aa18.16■□□□□ 0.5
CAPN1-216ENST00000528739 ANKIB1Q9P2G1 1089 aa18.16■□□□□ 0.5
CAPN1-216ENST00000528739 CLEC11AQ9Y240 323 aa18.16■□□□□ 0.5
CAPN1-216ENST00000528739 H7C1W4 665 aa18.15■□□□□ 0.5
CAPN1-216ENST00000528739 LMOD1P29536 600 aaPredicted RBP18.15■□□□□ 0.5
CAPN1-216ENST00000528739 GPSM2P81274 684 aa18.15■□□□□ 0.5
CAPN1-216ENST00000528739 WASHC4Q2M389 1173 aa18.15■□□□□ 0.5
CAPN1-216ENST00000528739 GPC2Q8N158 579 aa18.15■□□□□ 0.5
CAPN1-216ENST00000528739 CDC5LQ99459 802 aaKnown RBP18.15■□□□□ 0.5
CAPN1-216ENST00000528739 HACL1Q9UJ83 578 aa18.15■□□□□ 0.5
CAPN1-216ENST00000528739 EYA3Q99504 573 aa18.14■□□□□ 0.49
CAPN1-216ENST00000528739 BCL2L13Q9BXK5 485 aa18.14■□□□□ 0.49
CAPN1-216ENST00000528739 RTFDC1Q9BY42 306 aaPredicted RBP18.14■□□□□ 0.49
CAPN1-216ENST00000528739 ZNRF3Q9ULT6 936 aa18.14■□□□□ 0.49
CAPN1-216ENST00000528739 CHMP3Q9Y3E7 222 aa18.14■□□□□ 0.49
CAPN1-216ENST00000528739 SNED1Q8TER0 1413 aa18.14■□□□□ 0.49
CAPN1-216ENST00000528739 APLP1P51693 650 aa18.13■□□□□ 0.49
CAPN1-216ENST00000528739 TTLL11Q8NHH1 800 aa18.13■□□□□ 0.49
CAPN1-216ENST00000528739 GREM2Q9H772 168 aa18.13■□□□□ 0.49
CAPN1-216ENST00000528739 C9orf78Q9NZ63 289 aaPredicted RBP18.13■□□□□ 0.49
CAPN1-216ENST00000528739 DDX60Q8IY21 1712 aaKnown RBP18.12■□□□□ 0.49
CAPN1-216ENST00000528739 LAMB2P55268 1798 aa18.12■□□□□ 0.49
CAPN1-216ENST00000528739 DICER1Q9UPY3 1922 aaKnown RBP18.12■□□□□ 0.49
CAPN1-216ENST00000528739 EPHX2P34913 555 aa18.12■□□□□ 0.49
CAPN1-216ENST00000528739 IGHMBP2P38935 993 aaKnown RBP18.12■□□□□ 0.49
CAPN1-216ENST00000528739 KIAA2012Q0VF49 1180 aa18.12■□□□□ 0.49
CAPN1-216ENST00000528739 BEND3Q5T5X7 828 aa18.12■□□□□ 0.49
CAPN1-216ENST00000528739 L3MBTL3Q96JM7 780 aaPredicted RBP18.12■□□□□ 0.49
CAPN1-216ENST00000528739 ZC3H12CQ9C0D7 883 aaKnown RBP18.12■□□□□ 0.49
CAPN1-216ENST00000528739 TAF1DQ9H5J8 278 aaPredicted RBP18.12■□□□□ 0.49
CAPN1-216ENST00000528739 RAD17O75943 681 aa18.11■□□□□ 0.49
CAPN1-216ENST00000528739 UFL1O94874 794 aa18.11■□□□□ 0.49
CAPN1-216ENST00000528739 MRPL50Q8N5N7 158 aaKnown RBP18.11■□□□□ 0.49
CAPN1-216ENST00000528739 GPR101Q96P66 508 aaPredicted RBP18.11■□□□□ 0.49
CAPN1-216ENST00000528739 SRCIN1Q9C0H9 1055 aa18.11■□□□□ 0.49
CAPN1-216ENST00000528739 POLLQ9UGP5 575 aa18.11■□□□□ 0.49
CAPN1-216ENST00000528739 GGA1Q9UJY5 639 aa18.11■□□□□ 0.49
CAPN1-216ENST00000528739 POTEIP0CG38 1075 aa18.1■□□□□ 0.49
CAPN1-216ENST00000528739 POTEJP0CG39 1038 aa18.1■□□□□ 0.49
CAPN1-216ENST00000528739 TNIP1Q15025 636 aa18.1■□□□□ 0.49
CAPN1-216ENST00000528739 DOK7Q18PE1 504 aa18.1■□□□□ 0.49
CAPN1-216ENST00000528739 CIAPIN1Q6FI81 312 aa18.1■□□□□ 0.49
CAPN1-216ENST00000528739 CHADLQ6NUI6 762 aa18.1■□□□□ 0.49
CAPN1-216ENST00000528739 TBC1D16Q8TBP0 767 aa18.1■□□□□ 0.49
CAPN1-216ENST00000528739 SSH1Q8WYL5 1049 aa18.1■□□□□ 0.49
CAPN1-216ENST00000528739 MPHOSPH8Q99549 860 aa18.1■□□□□ 0.49
CAPN1-216ENST00000528739 DBNDD1Q9H9R9 158 aa18.1■□□□□ 0.49
CAPN1-216ENST00000528739 SMC4Q9NTJ3 1288 aa18.1■□□□□ 0.49
CAPN1-216ENST00000528739 WDR90Q96KV7 1748 aa18.09■□□□□ 0.49
CAPN1-216ENST00000528739 ITGA6P23229 1130 aa18.09■□□□□ 0.49
CAPN1-216ENST00000528739 CXCL9Q07325 125 aa18.09■□□□□ 0.49
CAPN1-216ENST00000528739 PNMA8AQ86V59 439 aaPredicted RBP18.09■□□□□ 0.49
CAPN1-216ENST00000528739 TAF1P21675 1872 aa18.09■□□□□ 0.49
CAPN1-216ENST00000528739 ANKRD18BA2A2Z9 1011 aa18.08■□□□□ 0.48
CAPN1-216ENST00000528739 GRM8O00222 908 aa18.08■□□□□ 0.48
CAPN1-216ENST00000528739 HTRA3P83110 453 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms