RNA–Protein interactions for RNA: ENST00000528730.1

PDZD3-209, Transcript of PDZ domain containing 3, humanhuman

TSL 3

Gene PDZD3, Length 584 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-209ENST00000528730 CCDC85AQ96PX6 553 aaPredicted RBP16.67■□□□□ 0.26
PDZD3-209ENST00000528730 NMRK2Q9NPI5 230 aa16.67■□□□□ 0.26
PDZD3-209ENST00000528730 ZC3H4Q9UPT8 1303 aaKnown RBP16.67■□□□□ 0.26
PDZD3-209ENST00000528730 PCCAP05165 728 aaPredicted RBP16.66■□□□□ 0.26
PDZD3-209ENST00000528730 C1QTNF8P60827 252 aa16.66■□□□□ 0.26
PDZD3-209ENST00000528730 DNAAF4Q8WXU2 420 aa16.66■□□□□ 0.26
PDZD3-209ENST00000528730 BBOX1O75936 387 aa16.65■□□□□ 0.26
PDZD3-209ENST00000528730 IARSP41252 1262 aaKnown RBP16.65■□□□□ 0.26
PDZD3-209ENST00000528730 GRAPQ13588 217 aa16.65■□□□□ 0.26
PDZD3-209ENST00000528730 UBE3BQ7Z3V4 1068 aa16.65■□□□□ 0.26
PDZD3-209ENST00000528730 GRAPLQ8TC17 118 aaPredicted RBP16.65■□□□□ 0.26
PDZD3-209ENST00000528730 JDP2Q8WYK2 163 aa16.65■□□□□ 0.26
PDZD3-209ENST00000528730 RRAGCQ9HB90 399 aa16.65■□□□□ 0.26
PDZD3-209ENST00000528730 NEURL1BA8MQ27 555 aa16.64■□□□□ 0.25
PDZD3-209ENST00000528730 F6X3S4 739 aa16.64■□□□□ 0.25
PDZD3-209ENST00000528730 IGKV5-2P06315 115 aa16.64■□□□□ 0.25
PDZD3-209ENST00000528730 CCDC152Q4G0S7 254 aa16.64■□□□□ 0.25
PDZD3-209ENST00000528730 GRIPAP1Q4V328 841 aa16.64■□□□□ 0.25
PDZD3-209ENST00000528730 SLC4A10Q6U841 1118 aa16.64■□□□□ 0.25
PDZD3-209ENST00000528730 PPP4R2Q9NY27 417 aa16.64■□□□□ 0.25
PDZD3-209ENST00000528730 ATP6V0A2Q9Y487 856 aa16.64■□□□□ 0.25
PDZD3-209ENST00000528730 MYH3P11055 1940 aa16.63■□□□□ 0.25
PDZD3-209ENST00000528730 GLTPD2A6NH11 291 aa16.63■□□□□ 0.25
PDZD3-209ENST00000528730 PDE8AO60658 829 aa16.63■□□□□ 0.25
PDZD3-209ENST00000528730 SF3B3Q15393 1217 aaKnown RBP16.63■□□□□ 0.25
PDZD3-209ENST00000528730 DPP8Q6V1X1 898 aaPredicted RBP16.63■□□□□ 0.25
PDZD3-209ENST00000528730 SLC51AQ86UW1 340 aa16.63■□□□□ 0.25
PDZD3-209ENST00000528730 LARGE2Q8N3Y3 721 aa16.63■□□□□ 0.25
PDZD3-209ENST00000528730 KIF3CO14782 793 aa16.62■□□□□ 0.25
PDZD3-209ENST00000528730 PPIP5K2O43314 1243 aa16.62■□□□□ 0.25
PDZD3-209ENST00000528730 MPNDQ8N594 471 aa16.62■□□□□ 0.25
PDZD3-209ENST00000528730 SUPT20HQ8NEM7 779 aa16.62■□□□□ 0.25
PDZD3-209ENST00000528730 LINS1Q8NG48 757 aa16.62■□□□□ 0.25
PDZD3-209ENST00000528730 CELF1Q92879 486 aaKnown RBP16.62■□□□□ 0.25
PDZD3-209ENST00000528730 PSMD1Q99460 953 aa16.62■□□□□ 0.25
PDZD3-209ENST00000528730 BCL2L13Q9BXK5 485 aa16.62■□□□□ 0.25
PDZD3-209ENST00000528730 MS4A1P11836 297 aa16.61■□□□□ 0.25
PDZD3-209ENST00000528730 RARSP54136 660 aaKnown RBP16.61■□□□□ 0.25
PDZD3-209ENST00000528730 ALDH1L2Q3SY69 923 aa16.61■□□□□ 0.25
PDZD3-209ENST00000528730 TMC4Q7Z404 712 aa16.61■□□□□ 0.25
PDZD3-209ENST00000528730 SP8Q8IXZ3 490 aa16.61■□□□□ 0.25
PDZD3-209ENST00000528730 NIM1KQ8IY84 436 aa16.61■□□□□ 0.25
PDZD3-209ENST00000528730 SMC4Q9NTJ3 1288 aa16.61■□□□□ 0.25
PDZD3-209ENST00000528730 CDHR2Q9BYE9 1310 aa16.61■□□□□ 0.25
PDZD3-209ENST00000528730 CTSWP56202 376 aa16.6■□□□□ 0.25
PDZD3-209ENST00000528730 EIF6P56537 245 aaKnown RBP16.6■□□□□ 0.25
PDZD3-209ENST00000528730 GCKRQ14397 625 aa16.6■□□□□ 0.25
PDZD3-209ENST00000528730 SEC31BQ9NQW1 1179 aa16.6■□□□□ 0.25
PDZD3-209ENST00000528730 NSFL1CQ9UNZ2 370 aaKnown RBP16.6■□□□□ 0.25
PDZD3-209ENST00000528730 SPEF2Q9C093 1822 aa16.6■□□□□ 0.25
PDZD3-209ENST00000528730 DDNO94850 711 aaPredicted RBP16.59■□□□□ 0.25
PDZD3-209ENST00000528730 VEGFAP15692 232 aaPredicted RBP16.59■□□□□ 0.25
PDZD3-209ENST00000528730 RPS8P62241 208 aaKnown RBP16.59■□□□□ 0.25
PDZD3-209ENST00000528730 IRX6P78412 446 aaPredicted RBP16.59■□□□□ 0.25
PDZD3-209ENST00000528730 PDE3AQ14432 1141 aa16.59■□□□□ 0.25
PDZD3-209ENST00000528730 AOC3Q16853 763 aa16.59■□□□□ 0.25
PDZD3-209ENST00000528730 C9orf78Q9NZ63 289 aaPredicted RBP16.59■□□□□ 0.25
PDZD3-209ENST00000528730 CHMP3Q9Y3E7 222 aa16.59■□□□□ 0.25
PDZD3-209ENST00000528730 GJA3Q9Y6H8 435 aa16.59■□□□□ 0.25
PDZD3-209ENST00000528730 C6orf229H3BNL8 230 aa16.58■□□□□ 0.24
PDZD3-209ENST00000528730 TOMM70O94826 608 aa16.58■□□□□ 0.24
PDZD3-209ENST00000528730 ANKRD18AQ8IVF6 992 aa16.58■□□□□ 0.24
PDZD3-209ENST00000528730 SSH1Q8WYL5 1049 aa16.58■□□□□ 0.24
PDZD3-209ENST00000528730 CDC5LQ99459 802 aaKnown RBP16.58■□□□□ 0.24
PDZD3-209ENST00000528730 ZNF541Q9H0D2 1346 aa16.57■□□□□ 0.24
PDZD3-209ENST00000528730 BRPF1P55201 1214 aaPredicted RBP16.57■□□□□ 0.24
PDZD3-209ENST00000528730 MRPL50Q8N5N7 158 aaKnown RBP16.57■□□□□ 0.24
PDZD3-209ENST00000528730 SRCIN1Q9C0H9 1055 aa16.57■□□□□ 0.24
PDZD3-209ENST00000528730 ANKIB1Q9P2G1 1089 aa16.57■□□□□ 0.24
PDZD3-209ENST00000528730 SNED1Q8TER0 1413 aa16.56■□□□□ 0.24
PDZD3-209ENST00000528730 G3V3G9 751 aa16.56■□□□□ 0.24
PDZD3-209ENST00000528730 H7C1W4 665 aa16.56■□□□□ 0.24
PDZD3-209ENST00000528730 BCAR3O75815 825 aa16.56■□□□□ 0.24
PDZD3-209ENST00000528730 BEND3Q5T5X7 828 aa16.56■□□□□ 0.24
PDZD3-209ENST00000528730 DCAF8Q5TAQ9 597 aa16.56■□□□□ 0.24
PDZD3-209ENST00000528730 LRRC37AA6NMS7 1700 aa16.56■□□□□ 0.24
PDZD3-209ENST00000528730 PTPRCP08575 1304 aa16.55■□□□□ 0.24
PDZD3-209ENST00000528730 RIMBP2O15034 1052 aa16.55■□□□□ 0.24
PDZD3-209ENST00000528730 IPO8O15397 1037 aaKnown RBP16.55■□□□□ 0.24
PDZD3-209ENST00000528730 AAMPQ13685 434 aa16.55■□□□□ 0.24
PDZD3-209ENST00000528730 TTLL11Q8NHH1 800 aa16.55■□□□□ 0.24
PDZD3-209ENST00000528730 GREM2Q9H772 168 aa16.55■□□□□ 0.24
PDZD3-209ENST00000528730 WDR90Q96KV7 1748 aa16.55■□□□□ 0.24
PDZD3-209ENST00000528730 COL4A1P02462 1669 aa16.55■□□□□ 0.24
PDZD3-209ENST00000528730 KIF16BQ96L93 1317 aa16.54■□□□□ 0.24
PDZD3-209ENST00000528730 IQCA1LA6NCM1 817 aa16.54■□□□□ 0.24
PDZD3-209ENST00000528730 GRM8O00222 908 aa16.54■□□□□ 0.24
PDZD3-209ENST00000528730 IGHMBP2P38935 993 aaKnown RBP16.54■□□□□ 0.24
PDZD3-209ENST00000528730 GPSM2P81274 684 aa16.54■□□□□ 0.24
PDZD3-209ENST00000528730 EYA3Q99504 573 aa16.54■□□□□ 0.24
PDZD3-209ENST00000528730 PLIN1O60240 522 aa16.53■□□□□ 0.24
PDZD3-209ENST00000528730 ALDH1L1O75891 902 aa16.53■□□□□ 0.24
PDZD3-209ENST00000528730 UFL1O94874 794 aa16.53■□□□□ 0.24
PDZD3-209ENST00000528730 LMOD1P29536 600 aaPredicted RBP16.53■□□□□ 0.24
PDZD3-209ENST00000528730 WASHC4Q2M389 1173 aa16.53■□□□□ 0.24
PDZD3-209ENST00000528730 FAM161AQ3B820 660 aa16.53■□□□□ 0.24
PDZD3-209ENST00000528730 TAF7LQ5H9L4 462 aa16.53■□□□□ 0.24
PDZD3-209ENST00000528730 RBM46Q8TBY0 533 aaKnown RBP16.53■□□□□ 0.24
PDZD3-209ENST00000528730 MPHOSPH8Q99549 860 aa16.53■□□□□ 0.24
PDZD3-209ENST00000528730 FZD9O00144 591 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms