RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 IRS4O14654 1257 aaPredicted RBP18.29■□□□□ 0.52
CAPN1-212ENST00000527887 POTEIP0CG38 1075 aa18.29■□□□□ 0.52
CAPN1-212ENST00000527887 POTEJP0CG39 1038 aa18.29■□□□□ 0.52
CAPN1-212ENST00000527887 PHAXQ9H814 394 aaKnown RBP18.29■□□□□ 0.52
CAPN1-212ENST00000527887 MRS2Q9HD23 443 aa18.29■□□□□ 0.52
CAPN1-212ENST00000527887 ZNRF3Q9ULT6 936 aa18.29■□□□□ 0.52
CAPN1-212ENST00000527887 GJA3Q9Y6H8 435 aa18.29■□□□□ 0.52
CAPN1-212ENST00000527887 ANKRD36CQ5JPF3 1778 aa18.28■□□□□ 0.52
CAPN1-212ENST00000527887 KIAA2012Q0VF49 1180 aa18.28■□□□□ 0.52
CAPN1-212ENST00000527887 EAPPQ56P03 285 aaPredicted RBP18.28■□□□□ 0.52
CAPN1-212ENST00000527887 CLEC11AQ9Y240 323 aa18.28■□□□□ 0.52
CAPN1-212ENST00000527887 PASKQ96RG2 1323 aa18.27■□□□□ 0.52
CAPN1-212ENST00000527887 AOC3Q16853 763 aa18.27■□□□□ 0.52
CAPN1-212ENST00000527887 METTL22Q9BUU2 404 aaPredicted RBP18.27■□□□□ 0.52
CAPN1-212ENST00000527887 STK31Q9BXU1 1019 aa18.27■□□□□ 0.52
CAPN1-212ENST00000527887 PCCAP05165 728 aaPredicted RBP18.26■□□□□ 0.51
CAPN1-212ENST00000527887 CWC25Q9NXE8 425 aaPredicted RBP18.26■□□□□ 0.51
CAPN1-212ENST00000527887 ITGBL1O95965 494 aaPredicted RBP18.25■□□□□ 0.51
CAPN1-212ENST00000527887 TNIP1Q15025 636 aa18.25■□□□□ 0.51
CAPN1-212ENST00000527887 IFFO2Q5TF58 517 aa18.25■□□□□ 0.51
CAPN1-212ENST00000527887 USP50Q70EL3 339 aaPredicted RBP18.25■□□□□ 0.51
CAPN1-212ENST00000527887 WDR63Q8IWG1 891 aa18.25■□□□□ 0.51
CAPN1-212ENST00000527887 TSPYL6Q8N831 410 aa18.25■□□□□ 0.51
CAPN1-212ENST00000527887 MYD88Q99836 296 aa18.25■□□□□ 0.51
CAPN1-212ENST00000527887 SCNN1DP51172 638 aa18.24■□□□□ 0.51
CAPN1-212ENST00000527887 RPS8P62241 208 aaKnown RBP18.24■□□□□ 0.51
CAPN1-212ENST00000527887 TWISTNBQ3B726 338 aaPredicted RBP18.24■□□□□ 0.51
CAPN1-212ENST00000527887 KSR2Q6VAB6 950 aa18.24■□□□□ 0.51
CAPN1-212ENST00000527887 CNTROBQ8N137 903 aa18.24■□□□□ 0.51
CAPN1-212ENST00000527887 TSR2Q969E8 191 aaKnown RBP18.24■□□□□ 0.51
CAPN1-212ENST00000527887 CDHR2Q9BYE9 1310 aa18.23■□□□□ 0.51
CAPN1-212ENST00000527887 COL4A5P29400 1685 aa18.23■□□□□ 0.51
CAPN1-212ENST00000527887 TMEM88BA6NKF7 163 aa18.23■□□□□ 0.51
CAPN1-212ENST00000527887 PDE8AO60658 829 aa18.23■□□□□ 0.51
CAPN1-212ENST00000527887 CXCL9Q07325 125 aa18.23■□□□□ 0.51
CAPN1-212ENST00000527887 NEXNQ0ZGT2 675 aa18.23■□□□□ 0.51
CAPN1-212ENST00000527887 CCDC152Q4G0S7 254 aa18.23■□□□□ 0.51
CAPN1-212ENST00000527887 RTL5Q5HYW3 569 aaPredicted RBP18.23■□□□□ 0.51
CAPN1-212ENST00000527887 SLC51AQ86UW1 340 aa18.23■□□□□ 0.51
CAPN1-212ENST00000527887 CELF1Q92879 486 aaKnown RBP18.23■□□□□ 0.51
CAPN1-212ENST00000527887 PCNTO95613 3336 aa18.23■□□□□ 0.51
CAPN1-212ENST00000527887 WASHC4Q2M389 1173 aa18.22■□□□□ 0.51
CAPN1-212ENST00000527887 CIAPIN1Q6FI81 312 aa18.22■□□□□ 0.51
CAPN1-212ENST00000527887 EYA3Q99504 573 aa18.22■□□□□ 0.51
CAPN1-212ENST00000527887 ADARB2Q9NS39 739 aaKnown RBP18.22■□□□□ 0.51
CAPN1-212ENST00000527887 GPRC5DQ9NZD1 345 aa18.22■□□□□ 0.51
CAPN1-212ENST00000527887 NSFL1CQ9UNZ2 370 aaKnown RBP18.22■□□□□ 0.51
CAPN1-212ENST00000527887 MAP3K2Q9Y2U5 619 aa18.22■□□□□ 0.51
CAPN1-212ENST00000527887 PI4KAP2A4QPH2 592 aa18.21■□□□□ 0.51
CAPN1-212ENST00000527887 EPS15P42566 896 aa18.21■□□□□ 0.51
CAPN1-212ENST00000527887 PI4KAP1Q8N8J0 262 aa18.21■□□□□ 0.51
CAPN1-212ENST00000527887 ZNF428Q96B54 188 aa18.21■□□□□ 0.51
CAPN1-212ENST00000527887 SLC4A2P04920 1241 aa18.2■□□□□ 0.5
CAPN1-212ENST00000527887 MAP1SQ66K74 1059 aaPredicted RBP18.2■□□□□ 0.5
CAPN1-212ENST00000527887 PODXL2Q9NZ53 605 aa18.2■□□□□ 0.5
CAPN1-212ENST00000527887 C6orf229H3BNL8 230 aa18.19■□□□□ 0.5
CAPN1-212ENST00000527887 DIEXFQ68CQ4 756 aaKnown RBP18.19■□□□□ 0.5
CAPN1-212ENST00000527887 CNTNAP1P78357 1384 aa18.18■□□□□ 0.5
CAPN1-212ENST00000527887 LAMB2P55268 1798 aa18.18■□□□□ 0.5
CAPN1-212ENST00000527887 ADAMTSL1Q8N6G6 1762 aa18.18■□□□□ 0.5
CAPN1-212ENST00000527887 IGKV5-2P06315 115 aa18.18■□□□□ 0.5
CAPN1-212ENST00000527887 GPSM2P81274 684 aa18.18■□□□□ 0.5
CAPN1-212ENST00000527887 ZC3H15Q8WU90 426 aaKnown RBP18.18■□□□□ 0.5
CAPN1-212ENST00000527887 BCL2L13Q9BXK5 485 aa18.18■□□□□ 0.5
CAPN1-212ENST00000527887 RAD17O75943 681 aa18.17■□□□□ 0.5
CAPN1-212ENST00000527887 GMPSP49915 693 aaPredicted RBP18.17■□□□□ 0.5
CAPN1-212ENST00000527887 TBC1D16Q8TBP0 767 aa18.17■□□□□ 0.5
CAPN1-212ENST00000527887 DPF2Q92785 391 aa18.17■□□□□ 0.5
CAPN1-212ENST00000527887 ZC3H12CQ9C0D7 883 aaKnown RBP18.17■□□□□ 0.5
CAPN1-212ENST00000527887 POLLQ9UGP5 575 aa18.17■□□□□ 0.5
CAPN1-212ENST00000527887 MKRN1Q9UHC7 482 aaKnown RBP18.17■□□□□ 0.5
CAPN1-212ENST00000527887 DDX60Q8IY21 1712 aaKnown RBP18.17■□□□□ 0.5
CAPN1-212ENST00000527887 FANCIQ9NVI1 1328 aa18.17■□□□□ 0.5
CAPN1-212ENST00000527887 ANKRD18AQ8IVF6 992 aa18.16■□□□□ 0.5
CAPN1-212ENST00000527887 CDC5LQ99459 802 aaKnown RBP18.16■□□□□ 0.5
CAPN1-212ENST00000527887 SEC31BQ9NQW1 1179 aa18.16■□□□□ 0.5
CAPN1-212ENST00000527887 PGAP2Q9UHJ9 254 aa18.16■□□□□ 0.5
CAPN1-212ENST00000527887 YDJCA8MPS7 323 aa18.15■□□□□ 0.5
CAPN1-212ENST00000527887 NEURL1BA8MQ27 555 aa18.15■□□□□ 0.5
CAPN1-212ENST00000527887 H7C1D1 291 aa18.15■□□□□ 0.5
CAPN1-212ENST00000527887 VAMP4O75379 141 aa18.15■□□□□ 0.5
CAPN1-212ENST00000527887 RPS12P25398 132 aaKnown RBP18.15■□□□□ 0.5
CAPN1-212ENST00000527887 CTSWP56202 376 aa18.15■□□□□ 0.5
CAPN1-212ENST00000527887 FLIIQ13045 1269 aa18.15■□□□□ 0.5
CAPN1-212ENST00000527887 MYH16Q9H6N6 1097 aa18.15■□□□□ 0.5
CAPN1-212ENST00000527887 ANKIB1Q9P2G1 1089 aa18.15■□□□□ 0.5
CAPN1-212ENST00000527887 GGA1Q9UJY5 639 aa18.15■□□□□ 0.5
CAPN1-212ENST00000527887 LRRC37AA6NMS7 1700 aa18.15■□□□□ 0.5
CAPN1-212ENST00000527887 RASSF10A6NK89 507 aa18.14■□□□□ 0.49
CAPN1-212ENST00000527887 H7C1W4 665 aa18.14■□□□□ 0.49
CAPN1-212ENST00000527887 HSPA1AP0DMV8 641 aaKnown RBP18.14■□□□□ 0.49
CAPN1-212ENST00000527887 HSPA1BP0DMV9 641 aaKnown RBP18.14■□□□□ 0.49
CAPN1-212ENST00000527887 DEFB115Q30KQ5 88 aa18.14■□□□□ 0.49
CAPN1-212ENST00000527887 G2E3Q7L622 706 aa18.14■□□□□ 0.49
CAPN1-212ENST00000527887 CNOT7Q9UIV1 285 aaKnown RBP18.14■□□□□ 0.49
CAPN1-212ENST00000527887 RTL9Q8NET4 1388 aa18.14■□□□□ 0.49
CAPN1-212ENST00000527887 DUOX1Q9NRD9 1551 aa18.13■□□□□ 0.49
CAPN1-212ENST00000527887 RIMBP2O15034 1052 aa18.13■□□□□ 0.49
CAPN1-212ENST00000527887 FKBP5Q13451 457 aaPredicted RBP18.13■□□□□ 0.49
CAPN1-212ENST00000527887 LINS1Q8NG48 757 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms