RNA–Protein interactions for RNA: ENST00000527845.1

CKLF-CMTM1-202, Transcript of CKLF-CMTM1 readthrough, humanhuman

TSL 3

Gene CKLF-CMTM1, Length 504 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-CMTM1-202ENST00000527845 AIDAQ96BJ3 306 aa22.74■■□□□ 1.23
CKLF-CMTM1-202ENST00000527845 ZNRF3Q9ULT6 936 aa22.74■■□□□ 1.23
CKLF-CMTM1-202ENST00000527845 TRPM7Q96QT4 1865 aa22.73■■□□□ 1.23
CKLF-CMTM1-202ENST00000527845 EPS15P42566 896 aa22.72■■□□□ 1.23
CKLF-CMTM1-202ENST00000527845 VEGFBP49765 207 aa22.72■■□□□ 1.23
CKLF-CMTM1-202ENST00000527845 KIAA2012Q0VF49 1180 aa22.72■■□□□ 1.23
CKLF-CMTM1-202ENST00000527845 PRKRIP1Q9H875 184 aaPredicted RBP22.72■■□□□ 1.23
CKLF-CMTM1-202ENST00000527845 ADARB2Q9NS39 739 aaKnown RBP22.72■■□□□ 1.23
CKLF-CMTM1-202ENST00000527845 DEFB115Q30KQ5 88 aa22.71■■□□□ 1.23
CKLF-CMTM1-202ENST00000527845 ISCA1Q9BUE6 129 aa22.71■■□□□ 1.23
CKLF-CMTM1-202ENST00000527845 GPRC5DQ9NZD1 345 aa22.71■■□□□ 1.23
CKLF-CMTM1-202ENST00000527845 TNIP1Q15025 636 aa22.7■■□□□ 1.22
CKLF-CMTM1-202ENST00000527845 DUSP27Q5VZP5 1158 aa22.7■■□□□ 1.22
CKLF-CMTM1-202ENST00000527845 CHMP4AQ9BY43 222 aa22.7■■□□□ 1.22
CKLF-CMTM1-202ENST00000527845 HSP90B1P14625 803 aaKnown RBP22.69■■□□□ 1.22
CKLF-CMTM1-202ENST00000527845 CXCL9Q07325 125 aa22.69■■□□□ 1.22
CKLF-CMTM1-202ENST00000527845 CIAPIN1Q6FI81 312 aa22.69■■□□□ 1.22
CKLF-CMTM1-202ENST00000527845 SLC51AQ86UW1 340 aa22.69■■□□□ 1.22
CKLF-CMTM1-202ENST00000527845 PRDM10Q9NQV6 1147 aa22.69■■□□□ 1.22
CKLF-CMTM1-202ENST00000527845 ABT1Q9ULW3 272 aaKnown RBP22.69■■□□□ 1.22
CKLF-CMTM1-202ENST00000527845 CTCFP49711 727 aaPredicted RBP22.68■■□□□ 1.22
CKLF-CMTM1-202ENST00000527845 GNAI1P63096 354 aa22.68■■□□□ 1.22
CKLF-CMTM1-202ENST00000527845 TRIM28Q13263 835 aaKnown RBP22.68■■□□□ 1.22
CKLF-CMTM1-202ENST00000527845 SF3B3Q15393 1217 aaKnown RBP22.68■■□□□ 1.22
CKLF-CMTM1-202ENST00000527845 MBIPQ9NS73 344 aa22.68■■□□□ 1.22
CKLF-CMTM1-202ENST00000527845 IFT57Q9NWB7 429 aa22.68■■□□□ 1.22
CKLF-CMTM1-202ENST00000527845 THSD7BQ9C0I4 1608 aa22.68■■□□□ 1.22
CKLF-CMTM1-202ENST00000527845 DUOX1Q9NRD9 1551 aa22.67■■□□□ 1.22
CKLF-CMTM1-202ENST00000527845 TAF1P21675 1872 aa22.67■■□□□ 1.22
CKLF-CMTM1-202ENST00000527845 ZNF853P0CG23 659 aa22.67■■□□□ 1.22
CKLF-CMTM1-202ENST00000527845 GOLGA2Q08379 1002 aa22.67■■□□□ 1.22
CKLF-CMTM1-202ENST00000527845 FOXN1O15353 648 aa22.66■■□□□ 1.22
CKLF-CMTM1-202ENST00000527845 BCL2L13Q9BXK5 485 aa22.66■■□□□ 1.22
CKLF-CMTM1-202ENST00000527845 WDR33Q9C0J8 1336 aaKnown RBP22.65■■□□□ 1.22
CKLF-CMTM1-202ENST00000527845 ECE1P42892 770 aa22.65■■□□□ 1.22
CKLF-CMTM1-202ENST00000527845 GMPSP49915 693 aaPredicted RBP22.65■■□□□ 1.22
CKLF-CMTM1-202ENST00000527845 MAP2K1Q02750 393 aaPredicted RBP22.65■■□□□ 1.22
CKLF-CMTM1-202ENST00000527845 WBP1LQ9NX94 342 aa22.65■■□□□ 1.22
CKLF-CMTM1-202ENST00000527845 ATP5J2-PTCD1G3V325 749 aa22.64■■□□□ 1.21
CKLF-CMTM1-202ENST00000527845 RIC3Q7Z5B4 369 aa22.64■■□□□ 1.21
CKLF-CMTM1-202ENST00000527845 ZC3H15Q8WU90 426 aaKnown RBP22.64■■□□□ 1.21
CKLF-CMTM1-202ENST00000527845 FAM89AQ96GI7 184 aa22.64■■□□□ 1.21
CKLF-CMTM1-202ENST00000527845 IRS4O14654 1257 aaPredicted RBP22.63■■□□□ 1.21
CKLF-CMTM1-202ENST00000527845 APAF1O14727 1248 aa22.63■■□□□ 1.21
CKLF-CMTM1-202ENST00000527845 CAPN15O75808 1086 aa22.63■■□□□ 1.21
CKLF-CMTM1-202ENST00000527845 WASHC4Q2M389 1173 aa22.62■■□□□ 1.21
CKLF-CMTM1-202ENST00000527845 EYA3Q99504 573 aa22.62■■□□□ 1.21
CKLF-CMTM1-202ENST00000527845 PGAP2Q9UHJ9 254 aa22.62■■□□□ 1.21
CKLF-CMTM1-202ENST00000527845 RAD17O75943 681 aa22.61■■□□□ 1.21
CKLF-CMTM1-202ENST00000527845 ZBTB38Q8NAP3 1195 aaPredicted RBP22.61■■□□□ 1.21
CKLF-CMTM1-202ENST00000527845 CELF1Q92879 486 aaKnown RBP22.61■■□□□ 1.21
CKLF-CMTM1-202ENST00000527845 NSFL1CQ9UNZ2 370 aaKnown RBP22.61■■□□□ 1.21
CKLF-CMTM1-202ENST00000527845 TLL2Q9Y6L7 1015 aa22.61■■□□□ 1.21
CKLF-CMTM1-202ENST00000527845 H7C1D1 291 aa22.6■■□□□ 1.21
CKLF-CMTM1-202ENST00000527845 DDX58O95786 925 aaKnown RBP22.6■■□□□ 1.21
CKLF-CMTM1-202ENST00000527845 CCDC191Q8NCU4 936 aa22.6■■□□□ 1.21
CKLF-CMTM1-202ENST00000527845 DPF2Q92785 391 aa22.6■■□□□ 1.21
CKLF-CMTM1-202ENST00000527845 YDJCA8MPS7 323 aa22.59■■□□□ 1.21
CKLF-CMTM1-202ENST00000527845 PAXIP1Q6ZW49 1069 aaPredicted RBP22.59■■□□□ 1.21
CKLF-CMTM1-202ENST00000527845 CAPNS2Q96L46 248 aa22.59■■□□□ 1.21
CKLF-CMTM1-202ENST00000527845 C6orf229H3BNL8 230 aa22.58■■□□□ 1.21
CKLF-CMTM1-202ENST00000527845 TRAF5O00463 557 aa22.58■■□□□ 1.21
CKLF-CMTM1-202ENST00000527845 RPS12P25398 132 aaKnown RBP22.58■■□□□ 1.21
CKLF-CMTM1-202ENST00000527845 RPS8P62241 208 aaKnown RBP22.58■■□□□ 1.21
CKLF-CMTM1-202ENST00000527845 CCDC30Q5VVM6 783 aa22.58■■□□□ 1.21
CKLF-CMTM1-202ENST00000527845 CST9Q5W186 159 aa22.58■■□□□ 1.21
CKLF-CMTM1-202ENST00000527845 BEGAINQ9BUH8 593 aa22.58■■□□□ 1.21
CKLF-CMTM1-202ENST00000527845 CNOT7Q9UIV1 285 aaKnown RBP22.58■■□□□ 1.21
CKLF-CMTM1-202ENST00000527845 CCDC152Q4G0S7 254 aa22.57■■□□□ 1.2
CKLF-CMTM1-202ENST00000527845 CDC37L1Q7L3B6 337 aa22.57■■□□□ 1.2
CKLF-CMTM1-202ENST00000527845 ZNF428Q96B54 188 aa22.57■■□□□ 1.2
CKLF-CMTM1-202ENST00000527845 HHIPL1Q96JK4 782 aa22.57■■□□□ 1.2
CKLF-CMTM1-202ENST00000527845 PHAXQ9H814 394 aaKnown RBP22.57■■□□□ 1.2
CKLF-CMTM1-202ENST00000527845 CELF2O95319 508 aaKnown RBP22.56■■□□□ 1.2
CKLF-CMTM1-202ENST00000527845 PCCAP05165 728 aaPredicted RBP22.56■■□□□ 1.2
CKLF-CMTM1-202ENST00000527845 RTL5Q5HYW3 569 aaPredicted RBP22.56■■□□□ 1.2
CKLF-CMTM1-202ENST00000527845 MICALL2Q8IY33 904 aa22.56■■□□□ 1.2
CKLF-CMTM1-202ENST00000527845 MYD88Q99836 296 aa22.56■■□□□ 1.2
CKLF-CMTM1-202ENST00000527845 CWC25Q9NXE8 425 aaPredicted RBP22.56■■□□□ 1.2
CKLF-CMTM1-202ENST00000527845 LBX1P52954 281 aa22.55■■□□□ 1.2
CKLF-CMTM1-202ENST00000527845 GPSM2P81274 684 aa22.55■■□□□ 1.2
CKLF-CMTM1-202ENST00000527845 FMR1Q06787 632 aaKnown RBP eCLIP22.55■■□□□ 1.2
CKLF-CMTM1-202ENST00000527845 GPR101Q96P66 508 aaPredicted RBP22.55■■□□□ 1.2
CKLF-CMTM1-202ENST00000527845 DBNDD1Q9H9R9 158 aa22.55■■□□□ 1.2
CKLF-CMTM1-202ENST00000527845 PODXL2Q9NZ53 605 aa22.55■■□□□ 1.2
CKLF-CMTM1-202ENST00000527845 POLLQ9UGP5 575 aa22.55■■□□□ 1.2
CKLF-CMTM1-202ENST00000527845 ELL2O00472 640 aaPredicted RBP22.54■■□□□ 1.2
CKLF-CMTM1-202ENST00000527845 PSMD14O00487 310 aa22.54■■□□□ 1.2
CKLF-CMTM1-202ENST00000527845 ECE2O60344 883 aa22.54■■□□□ 1.2
CKLF-CMTM1-202ENST00000527845 PDE8AO60658 829 aa22.54■■□□□ 1.2
CKLF-CMTM1-202ENST00000527845 HSPA8P11142 646 aaKnown RBP22.54■■□□□ 1.2
CKLF-CMTM1-202ENST00000527845 MAP2K2P36507 400 aa22.54■■□□□ 1.2
CKLF-CMTM1-202ENST00000527845 TBC1D16Q8TBP0 767 aa22.54■■□□□ 1.2
CKLF-CMTM1-202ENST00000527845 TRPM4Q8TD43 1214 aa22.54■■□□□ 1.2
CKLF-CMTM1-202ENST00000527845 METTL22Q9BUU2 404 aaPredicted RBP22.54■■□□□ 1.2
CKLF-CMTM1-202ENST00000527845 GLIS2Q9BZE0 524 aaPredicted RBP22.54■■□□□ 1.2
CKLF-CMTM1-202ENST00000527845 COL4A1P02462 1669 aa22.53■■□□□ 1.2
CKLF-CMTM1-202ENST00000527845 RIMBP2O15034 1052 aa22.53■■□□□ 1.2
CKLF-CMTM1-202ENST00000527845 CYP4F22Q6NT55 531 aa22.53■■□□□ 1.2
CKLF-CMTM1-202ENST00000527845 SAPCD2Q86UD0 394 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms