RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 LETM1O95202 739 aaPredicted RBP17.72■□□□□ 0.43
USP47-207ENST00000527733 TXLNAP40222 546 aa17.72■□□□□ 0.43
USP47-207ENST00000527733 TSR1Q2NL82 804 aaKnown RBP17.72■□□□□ 0.43
USP47-207ENST00000527733 ANKRD2Q9GZV1 360 aa17.72■□□□□ 0.43
USP47-207ENST00000527733 USP44Q9H0E7 712 aa17.72■□□□□ 0.43
USP47-207ENST00000527733 CFAP45Q9UL16 551 aa17.72■□□□□ 0.43
USP47-207ENST00000527733 PNMA6EA0A0J9YXQ4 647 aa17.72■□□□□ 0.43
USP47-207ENST00000527733 ME1P48163 572 aa17.72■□□□□ 0.43
USP47-207ENST00000527733 NSFL1CQ9UNZ2 370 aaKnown RBP17.72■□□□□ 0.43
USP47-207ENST00000527733 CYP7A1P22680 504 aa17.72■□□□□ 0.43
USP47-207ENST00000527733 HAND2P61296 217 aa17.72■□□□□ 0.43
USP47-207ENST00000527733 GSTO1P78417 241 aa17.72■□□□□ 0.43
USP47-207ENST00000527733 NOL7Q9UMY1 257 aaKnown RBP17.72■□□□□ 0.43
USP47-207ENST00000527733 CPSF1Q10570 1443 aaKnown RBP17.71■□□□□ 0.43
USP47-207ENST00000527733 CTCFLQ8NI51 663 aaPredicted RBP17.71■□□□□ 0.43
USP47-207ENST00000527733 MED14O60244 1454 aa17.71■□□□□ 0.43
USP47-207ENST00000527733 CRNKL1Q9BZJ0 848 aaKnown RBP17.71■□□□□ 0.43
USP47-207ENST00000527733 MPHOSPH10O00566 681 aaKnown RBP17.71■□□□□ 0.43
USP47-207ENST00000527733 ANAPC15P60006 121 aa17.71■□□□□ 0.43
USP47-207ENST00000527733 C8orf34Q49A92 452 aa17.71■□□□□ 0.43
USP47-207ENST00000527733 SLC12A7Q9Y666 1083 aa17.71■□□□□ 0.43
USP47-207ENST00000527733 HMGN5P82970 282 aaKnown RBP17.7■□□□□ 0.42
USP47-207ENST00000527733 RBM8AQ9Y5S9 174 aaKnown RBP17.7■□□□□ 0.42
USP47-207ENST00000527733 NCOA7Q8NI08 942 aa17.7■□□□□ 0.42
USP47-207ENST00000527733 KLHDC4Q8TBB5 520 aa17.7■□□□□ 0.42
USP47-207ENST00000527733 ZC3H12CQ9C0D7 883 aaKnown RBP17.7■□□□□ 0.42
USP47-207ENST00000527733 NAT10Q9H0A0 1025 aaKnown RBP17.7■□□□□ 0.42
USP47-207ENST00000527733 ASAP1Q9ULH1 1129 aa17.7■□□□□ 0.42
USP47-207ENST00000527733 AXIN2Q9Y2T1 843 aa17.7■□□□□ 0.42
USP47-207ENST00000527733 TNS3Q68CZ2 1445 aa17.7■□□□□ 0.42
USP47-207ENST00000527733 BRPF1P55201 1214 aaPredicted RBP17.7■□□□□ 0.42
USP47-207ENST00000527733 TIMM10P62072 90 aa17.7■□□□□ 0.42
USP47-207ENST00000527733 ZNF804AQ7Z570 1209 aa17.7■□□□□ 0.42
USP47-207ENST00000527733 MCM4P33991 863 aa17.7■□□□□ 0.42
USP47-207ENST00000527733 NAA16Q6N069 864 aaPredicted RBP17.7■□□□□ 0.42
USP47-207ENST00000527733 MFSD6Q6ZSS7 791 aa17.7■□□□□ 0.42
USP47-207ENST00000527733 C1orf167Q5SNV9 1468 aa17.69■□□□□ 0.42
USP47-207ENST00000527733 KDRP35968 1356 aa17.69■□□□□ 0.42
USP47-207ENST00000527733 PREX1Q8TCU6 1659 aa17.69■□□□□ 0.42
USP47-207ENST00000527733 LOC102724428A0A0B4J2F2 783 aa17.69■□□□□ 0.42
USP47-207ENST00000527733 A0A1B0GUL7 405 aa17.69■□□□□ 0.42
USP47-207ENST00000527733 SIK1P57059 783 aa17.69■□□□□ 0.42
USP47-207ENST00000527733 TTLL7Q6ZT98 887 aa17.69■□□□□ 0.42
USP47-207ENST00000527733 QTRT2Q9H974 415 aaKnown RBP17.69■□□□□ 0.42
USP47-207ENST00000527733 STK32BQ9NY57 414 aa17.69■□□□□ 0.42
USP47-207ENST00000527733 PDE4BQ07343 736 aa17.69■□□□□ 0.42
USP47-207ENST00000527733 NMIQ13287 307 aaPredicted RBP17.69■□□□□ 0.42
USP47-207ENST00000527733 OLFM4Q6UX06 510 aa17.69■□□□□ 0.42
USP47-207ENST00000527733 SPATA32Q96LK8 384 aa17.69■□□□□ 0.42
USP47-207ENST00000527733 KDM2BQ8NHM5 1336 aa17.69■□□□□ 0.42
USP47-207ENST00000527733 FRMPD1Q5SYB0 1578 aa17.68■□□□□ 0.42
USP47-207ENST00000527733 SPATA31D1Q6ZQQ2 1576 aa17.68■□□□□ 0.42
USP47-207ENST00000527733 TNNI3KQ59H18 835 aa17.68■□□□□ 0.42
USP47-207ENST00000527733 BEND3Q5T5X7 828 aa17.68■□□□□ 0.42
USP47-207ENST00000527733 FERMT3Q86UX7 667 aa17.68■□□□□ 0.42
USP47-207ENST00000527733 FPGT-TNNI3KV9GXZ4 949 aa17.68■□□□□ 0.42
USP47-207ENST00000527733 GOLGA8BA8MQT2 603 aa17.68■□□□□ 0.42
USP47-207ENST00000527733 NRXN1Q9ULB1 1477 aa17.68■□□□□ 0.42
USP47-207ENST00000527733 VWDEQ8N2E2 1590 aa17.68■□□□□ 0.42
USP47-207ENST00000527733 RNF113AO15541 343 aaKnown RBP17.68■□□□□ 0.42
USP47-207ENST00000527733 PNPLA6Q8IY17 1366 aa17.68■□□□□ 0.42
USP47-207ENST00000527733 CHMLP26374 656 aa17.67■□□□□ 0.42
USP47-207ENST00000527733 PIBF1Q8WXW3 757 aa17.67■□□□□ 0.42
USP47-207ENST00000527733 CDK5RAP3Q96JB5 506 aa17.67■□□□□ 0.42
USP47-207ENST00000527733 UNC5CLQ8IV45 518 aa17.67■□□□□ 0.42
USP47-207ENST00000527733 OTUD7AQ8TE49 926 aaPredicted RBP17.67■□□□□ 0.42
USP47-207ENST00000527733 MCM5P33992 734 aa17.66■□□□□ 0.42
USP47-207ENST00000527733 TMEM67Q5HYA8 995 aa17.66■□□□□ 0.42
USP47-207ENST00000527733 ZNF594Q96JF6 807 aaPredicted RBP17.66■□□□□ 0.42
USP47-207ENST00000527733 GOLGA8AA7E2F4 631 aa17.66■□□□□ 0.42
USP47-207ENST00000527733 APBA3O96018 575 aa17.66■□□□□ 0.42
USP47-207ENST00000527733 CATIPQ7Z7H3 387 aa17.66■□□□□ 0.42
USP47-207ENST00000527733 C8orf76Q96K31 380 aa17.66■□□□□ 0.42
USP47-207ENST00000527733 DBNDD2Q9BQY9 259 aa17.66■□□□□ 0.42
USP47-207ENST00000527733 LARP6Q9BRS8 491 aaKnown RBP17.66■□□□□ 0.42
USP47-207ENST00000527733 THRAP3Q9Y2W1 955 aaKnown RBP17.66■□□□□ 0.42
USP47-207ENST00000527733 SSH3Q8TE77 659 aa17.66■□□□□ 0.42
USP47-207ENST00000527733 SLC4A4Q9Y6R1 1079 aa17.66■□□□□ 0.42
USP47-207ENST00000527733 MRE11P49959 708 aa17.66■□□□□ 0.42
USP47-207ENST00000527733 PUM3Q15397 648 aaKnown RBP17.66■□□□□ 0.42
USP47-207ENST00000527733 CCAR1Q8IX12 1150 aaKnown RBP17.66■□□□□ 0.42
USP47-207ENST00000527733 TSPY2A6NKD2 308 aa17.65■□□□□ 0.42
USP47-207ENST00000527733 RNF214Q8ND24 703 aa17.65■□□□□ 0.42
USP47-207ENST00000527733 RBM17Q96I25 401 aaKnown RBP17.65■□□□□ 0.42
USP47-207ENST00000527733 RAD50Q92878 1312 aa17.65■□□□□ 0.42
USP47-207ENST00000527733 POLD1P28340 1107 aa17.65■□□□□ 0.42
USP47-207ENST00000527733 CCT2P78371 535 aaKnown RBP17.65■□□□□ 0.42
USP47-207ENST00000527733 PROSER3Q2NL68 480 aa17.65■□□□□ 0.42
USP47-207ENST00000527733 AOX1Q06278 1338 aa17.65■□□□□ 0.42
USP47-207ENST00000527733 CYP27B1O15528 508 aa17.64■□□□□ 0.42
USP47-207ENST00000527733 HLA-DOAP06340 250 aa17.64■□□□□ 0.42
USP47-207ENST00000527733 CCDC82Q8N4S0 544 aa17.64■□□□□ 0.42
USP47-207ENST00000527733 PCMTD1Q96MG8 357 aaPredicted RBP17.64■□□□□ 0.41
USP47-207ENST00000527733 SEC63Q9UGP8 760 aaKnown RBP17.64■□□□□ 0.41
USP47-207ENST00000527733 FAM13BQ9NYF5 915 aa17.64■□□□□ 0.41
USP47-207ENST00000527733 TECPR2O15040 1411 aa17.64■□□□□ 0.41
USP47-207ENST00000527733 BRF1Q92994 677 aa17.63■□□□□ 0.41
USP47-207ENST00000527733 EYA3Q99504 573 aa17.63■□□□□ 0.41
USP47-207ENST00000527733 IL6STP40189 918 aaPredicted RBP17.63■□□□□ 0.41
USP47-207ENST00000527733 KRT23Q9C075 422 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms