RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 POLR3GO15318 223 aaPredicted RBP8.74□□□□□ -1.01
SOX6-208ENST00000527619 EPB41L2O43491 1005 aaKnown RBP8.74□□□□□ -1.01
SOX6-208ENST00000527619 ZRANB2O95218 330 aaKnown RBP eCLIP8.74□□□□□ -1.01
SOX6-208ENST00000527619 BARGINQ6ZT62 677 aa8.74□□□□□ -1.01
SOX6-208ENST00000527619 FILIP1Q7Z7B0 1213 aa8.74□□□□□ -1.01
SOX6-208ENST00000527619 L2HGDHQ9H9P8 463 aa8.74□□□□□ -1.01
SOX6-208ENST00000527619 TRAK1Q9UPV9 953 aa8.74□□□□□ -1.01
SOX6-208ENST00000527619 DEPDC5O75140 1603 aa8.74□□□□□ -1.01
SOX6-208ENST00000527619 VWDEQ8N2E2 1590 aa8.74□□□□□ -1.01
SOX6-208ENST00000527619 KDM4FA0A1W2PPD8 638 aa8.73□□□□□ -1.01
SOX6-208ENST00000527619 TESPA1A2RU30 521 aaPredicted RBP8.73□□□□□ -1.01
SOX6-208ENST00000527619 FCHSD2O94868 740 aa8.73□□□□□ -1.01
SOX6-208ENST00000527619 SKILP12757 684 aa8.73□□□□□ -1.01
SOX6-208ENST00000527619 CHMLP26374 656 aa8.73□□□□□ -1.01
SOX6-208ENST00000527619 GYS2P54840 703 aa8.73□□□□□ -1.01
SOX6-208ENST00000527619 CAMK4Q16566 473 aa8.73□□□□□ -1.01
SOX6-208ENST00000527619 GGT6Q6P531 493 aa8.73□□□□□ -1.01
SOX6-208ENST00000527619 TMCO3Q6UWJ1 677 aa8.73□□□□□ -1.01
SOX6-208ENST00000527619 CCAR2Q8N163 923 aaKnown RBP8.73□□□□□ -1.01
SOX6-208ENST00000527619 ERCC4Q92889 916 aaPredicted RBP8.73□□□□□ -1.01
SOX6-208ENST00000527619 SMARCE1Q969G3 411 aa8.73□□□□□ -1.01
SOX6-208ENST00000527619 TNMDQ9H2S6 317 aa8.73□□□□□ -1.01
SOX6-208ENST00000527619 ATG3Q9NT62 314 aa8.73□□□□□ -1.01
SOX6-208ENST00000527619 NUB1Q9Y5A7 615 aa8.73□□□□□ -1.01
SOX6-208ENST00000527619 CCDC196A0A1B0GTZ2 297 aa8.73□□□□□ -1.01
SOX6-208ENST00000527619 ATP8B1O43520 1251 aa8.73□□□□□ -1.01
SOX6-208ENST00000527619 ST5P78524 1137 aa8.73□□□□□ -1.01
SOX6-208ENST00000527619 SRLQ86TD4 932 aa8.73□□□□□ -1.01
SOX6-208ENST00000527619 MBIPQ9NS73 344 aa8.73□□□□□ -1.01
SOX6-208ENST00000527619 LCMT1Q9UIC8 334 aa8.73□□□□□ -1.01
SOX6-208ENST00000527619 MTMR6Q9Y217 621 aa8.73□□□□□ -1.01
SOX6-208ENST00000527619 HMMRO75330 724 aa8.72□□□□□ -1.01
SOX6-208ENST00000527619 ATP2B1P20020 1258 aa8.72□□□□□ -1.01
SOX6-208ENST00000527619 HSPA4P34932 840 aa8.72□□□□□ -1.01
SOX6-208ENST00000527619 RHBDL3P58872 404 aa8.72□□□□□ -1.01
SOX6-208ENST00000527619 SART3Q15020 963 aaKnown RBP8.72□□□□□ -1.01
SOX6-208ENST00000527619 ARHGAP29Q52LW3 1261 aa8.72□□□□□ -1.01
SOX6-208ENST00000527619 SARM1Q6SZW1 724 aa8.72□□□□□ -1.01
SOX6-208ENST00000527619 CKAP2LQ8IYA6 745 aa8.72□□□□□ -1.01
SOX6-208ENST00000527619 GOLGA5Q8TBA6 731 aa8.72□□□□□ -1.01
SOX6-208ENST00000527619 TBC1D22AQ8WUA7 517 aa8.72□□□□□ -1.01
SOX6-208ENST00000527619 RNF25Q96BH1 459 aaPredicted RBP8.72□□□□□ -1.01
SOX6-208ENST00000527619 MRFAP1L1Q96HT8 127 aa8.72□□□□□ -1.01
SOX6-208ENST00000527619 UBXN6Q9BZV1 441 aa8.72□□□□□ -1.01
SOX6-208ENST00000527619 ESF1Q9H501 851 aaKnown RBP8.72□□□□□ -1.01
SOX6-208ENST00000527619 TRMT1Q9NXH9 659 aaKnown RBP8.72□□□□□ -1.01
SOX6-208ENST00000527619 MROH2AA6NES4 1674 aa8.72□□□□□ -1.01
SOX6-208ENST00000527619 ONECUT3O60422 494 aaPredicted RBP8.72□□□□□ -1.01
SOX6-208ENST00000527619 ZNF165P49910 485 aa8.72□□□□□ -1.01
SOX6-208ENST00000527619 CCZ1BP86790 482 aa8.72□□□□□ -1.01
SOX6-208ENST00000527619 CCZ1P86791 482 aaPredicted RBP8.72□□□□□ -1.01
SOX6-208ENST00000527619 NFE2L2Q16236 605 aa8.72□□□□□ -1.01
SOX6-208ENST00000527619 RBM43Q6ZSC3 357 aaKnown RBP8.72□□□□□ -1.01
SOX6-208ENST00000527619 FBXO18Q8NFZ0 1043 aa8.72□□□□□ -1.01
SOX6-208ENST00000527619 SPOCK2Q92563 424 aa8.72□□□□□ -1.01
SOX6-208ENST00000527619 TTC14Q96N46 770 aa8.72□□□□□ -1.01
SOX6-208ENST00000527619 DDX19AQ9NUU7 478 aaKnown RBP8.72□□□□□ -1.01
SOX6-208ENST00000527619 LIMCH1Q9UPQ0 1083 aa8.72□□□□□ -1.01
SOX6-208ENST00000527619 CCDC69A6NI79 296 aa8.71□□□□□ -1.01
SOX6-208ENST00000527619 CAND2O75155 1236 aa8.71□□□□□ -1.01
SOX6-208ENST00000527619 CAVIN2O95810 425 aa8.71□□□□□ -1.01
SOX6-208ENST00000527619 PRKAR2BP31323 418 aa8.71□□□□□ -1.01
SOX6-208ENST00000527619 AK2P54819 239 aa8.71□□□□□ -1.01
SOX6-208ENST00000527619 SNW1Q13573 536 aaKnown RBP8.71□□□□□ -1.01
SOX6-208ENST00000527619 ARID5BQ14865 1188 aa8.71□□□□□ -1.01
SOX6-208ENST00000527619 CCDC93Q567U6 631 aa8.71□□□□□ -1.01
SOX6-208ENST00000527619 NOM1Q5C9Z4 860 aaKnown RBP8.71□□□□□ -1.01
SOX6-208ENST00000527619 ACRBPQ8NEB7 543 aa8.71□□□□□ -1.01
SOX6-208ENST00000527619 AK7Q96M32 723 aa8.71□□□□□ -1.01
SOX6-208ENST00000527619 EXOC6BQ9Y2D4 811 aa8.71□□□□□ -1.01
SOX6-208ENST00000527619 RRP15Q9Y3B9 282 aaKnown RBP8.71□□□□□ -1.01
SOX6-208ENST00000527619 ADGRB1O14514 1584 aa8.71□□□□□ -1.01
SOX6-208ENST00000527619 MSH6P52701 1360 aa8.71□□□□□ -1.01
SOX6-208ENST00000527619 PNPLA6Q8IY17 1366 aa8.71□□□□□ -1.01
SOX6-208ENST00000527619 TTC21BQ7Z4L5 1316 aa8.71□□□□□ -1.02
SOX6-208ENST00000527619 EVC2Q86UK5 1308 aa8.71□□□□□ -1.02
SOX6-208ENST00000527619 SALL3Q9BXA9 1300 aa8.71□□□□□ -1.02
SOX6-208ENST00000527619 UGGT1Q9NYU2 1555 aa8.71□□□□□ -1.02
SOX6-208ENST00000527619 A0A1B0GUL7 405 aa8.71□□□□□ -1.02
SOX6-208ENST00000527619 ZMYND10O75800 440 aa8.71□□□□□ -1.02
SOX6-208ENST00000527619 GJB2P29033 226 aa8.71□□□□□ -1.02
SOX6-208ENST00000527619 OAS2P29728 719 aaKnown RBP8.71□□□□□ -1.02
SOX6-208ENST00000527619 ABCD1P33897 745 aa8.71□□□□□ -1.02
SOX6-208ENST00000527619 KRT85P78386 507 aa8.71□□□□□ -1.02
SOX6-208ENST00000527619 NUTM2GQ5VZR2 741 aa8.71□□□□□ -1.02
SOX6-208ENST00000527619 PROM2Q8N271 834 aa8.71□□□□□ -1.02
SOX6-208ENST00000527619 C8orf58Q8NAV2 365 aa8.71□□□□□ -1.02
SOX6-208ENST00000527619 RILPL2Q969X0 211 aa8.71□□□□□ -1.02
SOX6-208ENST00000527619 THUMPD2Q9BTF0 503 aaKnown RBP8.71□□□□□ -1.02
SOX6-208ENST00000527619 CLSTN2Q9H4D0 955 aa8.71□□□□□ -1.02
SOX6-208ENST00000527619 IGSF5Q9NSI5 407 aa8.71□□□□□ -1.02
SOX6-208ENST00000527619 CHMP3Q9Y3E7 222 aa8.71□□□□□ -1.02
SOX6-208ENST00000527619 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.71□□□□□ -1.02
SOX6-208ENST00000527619 TULP4Q9NRJ4 1543 aa8.71□□□□□ -1.02
SOX6-208ENST00000527619 KIAA0232Q92628 1395 aa8.71□□□□□ -1.02
SOX6-208ENST00000527619 ANKRD33BA6NCL7 494 aa8.7□□□□□ -1.02
SOX6-208ENST00000527619 GOLGA6L19H0YKK7 550 aa8.7□□□□□ -1.02
SOX6-208ENST00000527619 RUFY3Q7L099 469 aa8.7□□□□□ -1.02
SOX6-208ENST00000527619 TTC6Q86TZ1 520 aa8.7□□□□□ -1.02
SOX6-208ENST00000527619 IQUBQ8NA54 791 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms