RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 ZBTB38Q8NAP3 1195 aaPredicted RBP13.46□□□□□ -0.25
PRPF40B-204ENST00000527253 JDP2Q8WYK2 163 aa13.46□□□□□ -0.25
PRPF40B-204ENST00000527253 MAP3K2Q9Y2U5 619 aa13.46□□□□□ -0.25
PRPF40B-204ENST00000527253 PI4KAP2A4QPH2 592 aa13.45□□□□□ -0.26
PRPF40B-204ENST00000527253 IGKV5-2P06315 115 aa13.45□□□□□ -0.26
PRPF40B-204ENST00000527253 CHADLQ6NUI6 762 aa13.45□□□□□ -0.26
PRPF40B-204ENST00000527253 KSR2Q6VAB6 950 aa13.45□□□□□ -0.26
PRPF40B-204ENST00000527253 WDR63Q8IWG1 891 aa13.45□□□□□ -0.26
PRPF40B-204ENST00000527253 GPC2Q8N158 579 aa13.45□□□□□ -0.26
PRPF40B-204ENST00000527253 MPNDQ8N594 471 aa13.45□□□□□ -0.26
PRPF40B-204ENST00000527253 PI4KAP1Q8N8J0 262 aa13.45□□□□□ -0.26
PRPF40B-204ENST00000527253 SCN4AP35499 1836 aa13.44□□□□□ -0.26
PRPF40B-204ENST00000527253 IQCA1LA6NCM1 817 aa13.44□□□□□ -0.26
PRPF40B-204ENST00000527253 PPIP5K2O43314 1243 aa13.44□□□□□ -0.26
PRPF40B-204ENST00000527253 VAMP4O75379 141 aa13.44□□□□□ -0.26
PRPF40B-204ENST00000527253 PCCAP05165 728 aaPredicted RBP13.44□□□□□ -0.26
PRPF40B-204ENST00000527253 DPP8Q6V1X1 898 aaPredicted RBP13.44□□□□□ -0.26
PRPF40B-204ENST00000527253 CCDC191Q8NCU4 936 aa13.44□□□□□ -0.26
PRPF40B-204ENST00000527253 SEC31BQ9NQW1 1179 aa13.44□□□□□ -0.26
PRPF40B-204ENST00000527253 GJA3Q9Y6H8 435 aa13.44□□□□□ -0.26
PRPF40B-204ENST00000527253 DDX58O95786 925 aaKnown RBP13.43□□□□□ -0.26
PRPF40B-204ENST00000527253 SLC4A2P04920 1241 aa13.43□□□□□ -0.26
PRPF40B-204ENST00000527253 EPHX2P34913 555 aa13.43□□□□□ -0.26
PRPF40B-204ENST00000527253 EIF6P56537 245 aaKnown RBP13.43□□□□□ -0.26
PRPF40B-204ENST00000527253 EXOSC9Q06265 439 aaKnown RBP13.43□□□□□ -0.26
PRPF40B-204ENST00000527253 CHMP4AQ9BY43 222 aa13.43□□□□□ -0.26
PRPF40B-204ENST00000527253 VPS33BQ9H267 617 aa13.43□□□□□ -0.26
PRPF40B-204ENST00000527253 DUOX1Q9NRD9 1551 aa13.43□□□□□ -0.26
PRPF40B-204ENST00000527253 CWC25Q9NXE8 425 aaPredicted RBP13.43□□□□□ -0.26
PRPF40B-204ENST00000527253 HACL1Q9UJ83 578 aa13.43□□□□□ -0.26
PRPF40B-204ENST00000527253 LTBP1Q14766 1721 aa13.42□□□□□ -0.26
PRPF40B-204ENST00000527253 EPS15P42566 896 aa13.42□□□□□ -0.26
PRPF40B-204ENST00000527253 SCNN1DP51172 638 aa13.42□□□□□ -0.26
PRPF40B-204ENST00000527253 GPSM2P81274 684 aa13.42□□□□□ -0.26
PRPF40B-204ENST00000527253 KIAA2012Q0VF49 1180 aa13.42□□□□□ -0.26
PRPF40B-204ENST00000527253 LDHDQ86WU2 507 aa13.42□□□□□ -0.26
PRPF40B-204ENST00000527253 NIM1KQ8IY84 436 aa13.42□□□□□ -0.26
PRPF40B-204ENST00000527253 SUPT20HQ8NEM7 779 aa13.42□□□□□ -0.26
PRPF40B-204ENST00000527253 KLRG1Q96E93 195 aa13.42□□□□□ -0.26
PRPF40B-204ENST00000527253 STK31Q9BXU1 1019 aa13.42□□□□□ -0.26
PRPF40B-204ENST00000527253 TMX4Q9H1E5 349 aaPredicted RBP13.42□□□□□ -0.26
PRPF40B-204ENST00000527253 ADAMTSL1Q8N6G6 1762 aa13.41□□□□□ -0.26
PRPF40B-204ENST00000527253 ITGBL1O95965 494 aaPredicted RBP13.41□□□□□ -0.26
PRPF40B-204ENST00000527253 RPS8P62241 208 aaKnown RBP13.41□□□□□ -0.26
PRPF40B-204ENST00000527253 CXCL9Q07325 125 aa13.41□□□□□ -0.26
PRPF40B-204ENST00000527253 CWF19L2Q2TBE0 894 aaKnown RBP13.41□□□□□ -0.26
PRPF40B-204ENST00000527253 EAPPQ56P03 285 aaPredicted RBP13.41□□□□□ -0.26
PRPF40B-204ENST00000527253 TMC4Q7Z404 712 aa13.41□□□□□ -0.26
PRPF40B-204ENST00000527253 CCDC85AQ96PX6 553 aaPredicted RBP13.41□□□□□ -0.26
PRPF40B-204ENST00000527253 POLLQ9UGP5 575 aa13.41□□□□□ -0.26
PRPF40B-204ENST00000527253 ZNRF3Q9ULT6 936 aa13.41□□□□□ -0.26
PRPF40B-204ENST00000527253 LRRC37AA6NMS7 1700 aa13.41□□□□□ -0.26
PRPF40B-204ENST00000527253 PASKQ96RG2 1323 aa13.4□□□□□ -0.26
PRPF40B-204ENST00000527253 YDJCA8MPS7 323 aa13.4□□□□□ -0.26
PRPF40B-204ENST00000527253 NEURL1BA8MQ27 555 aa13.4□□□□□ -0.26
PRPF40B-204ENST00000527253 PDE8AO60658 829 aa13.4□□□□□ -0.26
PRPF40B-204ENST00000527253 FLIIQ13045 1269 aa13.4□□□□□ -0.26
PRPF40B-204ENST00000527253 GPR101Q96P66 508 aaPredicted RBP13.4□□□□□ -0.26
PRPF40B-204ENST00000527253 NSFL1CQ9UNZ2 370 aaKnown RBP13.4□□□□□ -0.26
PRPF40B-204ENST00000527253 ZNF521Q96K83 1311 aa13.39□□□□□ -0.27
PRPF40B-204ENST00000527253 CDHR2Q9BYE9 1310 aa13.39□□□□□ -0.27
PRPF40B-204ENST00000527253 H7C1W4 665 aa13.39□□□□□ -0.27
PRPF40B-204ENST00000527253 JMYQ8N9B5 988 aa13.39□□□□□ -0.27
PRPF40B-204ENST00000527253 CLEC11AQ9Y240 323 aa13.39□□□□□ -0.27
PRPF40B-204ENST00000527253 RAD17O75943 681 aa13.38□□□□□ -0.27
PRPF40B-204ENST00000527253 MAP1SQ66K74 1059 aaPredicted RBP13.38□□□□□ -0.27
PRPF40B-204ENST00000527253 PNMA8AQ86V59 439 aaPredicted RBP13.38□□□□□ -0.27
PRPF40B-204ENST00000527253 TBC1D16Q8TBP0 767 aa13.38□□□□□ -0.27
PRPF40B-204ENST00000527253 RIMBP2O15034 1052 aa13.37□□□□□ -0.27
PRPF40B-204ENST00000527253 GMPSP49915 693 aaPredicted RBP13.37□□□□□ -0.27
PRPF40B-204ENST00000527253 CASP7P55210 303 aa13.37□□□□□ -0.27
PRPF40B-204ENST00000527253 NEXNQ0ZGT2 675 aa13.37□□□□□ -0.27
PRPF40B-204ENST00000527253 GCKRQ14397 625 aa13.37□□□□□ -0.27
PRPF40B-204ENST00000527253 WASHC4Q2M389 1173 aa13.37□□□□□ -0.27
PRPF40B-204ENST00000527253 CCDC152Q4G0S7 254 aa13.37□□□□□ -0.27
PRPF40B-204ENST00000527253 CIAPIN1Q6FI81 312 aa13.37□□□□□ -0.27
PRPF40B-204ENST00000527253 CNTROBQ8N137 903 aa13.37□□□□□ -0.27
PRPF40B-204ENST00000527253 TTLL11Q8NHH1 800 aa13.37□□□□□ -0.27
PRPF40B-204ENST00000527253 DNAAF4Q8WXU2 420 aa13.37□□□□□ -0.27
PRPF40B-204ENST00000527253 KCNQ5Q9NR82 932 aa13.37□□□□□ -0.27
PRPF40B-204ENST00000527253 GPRC5DQ9NZD1 345 aa13.37□□□□□ -0.27
PRPF40B-204ENST00000527253 SHTN1A0MZ66 631 aa13.36□□□□□ -0.27
PRPF40B-204ENST00000527253 WTIPA6NIX2 430 aaPredicted RBP13.36□□□□□ -0.27
PRPF40B-204ENST00000527253 C6orf229H3BNL8 230 aa13.36□□□□□ -0.27
PRPF40B-204ENST00000527253 HSP90B1P14625 803 aaKnown RBP13.36□□□□□ -0.27
PRPF40B-204ENST00000527253 LMOD1P29536 600 aaPredicted RBP13.36□□□□□ -0.27
PRPF40B-204ENST00000527253 CTSWP56202 376 aa13.36□□□□□ -0.27
PRPF40B-204ENST00000527253 FMR1Q06787 632 aaKnown RBP eCLIP13.36□□□□□ -0.27
PRPF40B-204ENST00000527253 FKBP5Q13451 457 aaPredicted RBP13.36□□□□□ -0.27
PRPF40B-204ENST00000527253 DOK7Q18PE1 504 aa13.36□□□□□ -0.27
PRPF40B-204ENST00000527253 UBE3BQ7Z3V4 1068 aa13.36□□□□□ -0.27
PRPF40B-204ENST00000527253 GREM2Q9H772 168 aa13.36□□□□□ -0.27
PRPF40B-204ENST00000527253 DBNDD1Q9H9R9 158 aa13.36□□□□□ -0.27
PRPF40B-204ENST00000527253 CREBZFQ9NS37 354 aa13.36□□□□□ -0.27
PRPF40B-204ENST00000527253 PODXL2Q9NZ53 605 aa13.36□□□□□ -0.27
PRPF40B-204ENST00000527253 F6X3S4 739 aa13.35□□□□□ -0.27
PRPF40B-204ENST00000527253 MYH16Q9H6N6 1097 aa13.35□□□□□ -0.27
PRPF40B-204ENST00000527253 CACNA1FO60840 1977 aa13.34□□□□□ -0.27
PRPF40B-204ENST00000527253 RTL9Q8NET4 1388 aa13.34□□□□□ -0.27
PRPF40B-204ENST00000527253 HIRAP54198 1017 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms