RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 EPHX2P34913 555 aa15.57■□□□□ 0.08
SSBP3-210ENST00000525990 G2E3Q7L622 706 aa15.57■□□□□ 0.08
SSBP3-210ENST00000525990 SP8Q8IXZ3 490 aa15.57■□□□□ 0.08
SSBP3-210ENST00000525990 GPC2Q8N158 579 aa15.57■□□□□ 0.08
SSBP3-210ENST00000525990 SCN9AQ15858 1988 aa15.56■□□□□ 0.08
SSBP3-210ENST00000525990 IRS4O14654 1257 aaPredicted RBP15.56■□□□□ 0.08
SSBP3-210ENST00000525990 BBOX1O75936 387 aa15.56■□□□□ 0.08
SSBP3-210ENST00000525990 SCNN1DP51172 638 aa15.56■□□□□ 0.08
SSBP3-210ENST00000525990 EIF6P56537 245 aaKnown RBP15.56■□□□□ 0.08
SSBP3-210ENST00000525990 TRIM28Q13263 835 aaKnown RBP15.56■□□□□ 0.08
SSBP3-210ENST00000525990 CCDC30Q5VVM6 783 aa15.56■□□□□ 0.08
SSBP3-210ENST00000525990 DPP8Q6V1X1 898 aaPredicted RBP15.56■□□□□ 0.08
SSBP3-210ENST00000525990 NIM1KQ8IY84 436 aa15.56■□□□□ 0.08
SSBP3-210ENST00000525990 FANCIQ9NVI1 1328 aa15.56■□□□□ 0.08
SSBP3-210ENST00000525990 EPS15P42566 896 aa15.55■□□□□ 0.08
SSBP3-210ENST00000525990 SF3B3Q15393 1217 aaKnown RBP15.55■□□□□ 0.08
SSBP3-210ENST00000525990 TWISTNBQ3B726 338 aaPredicted RBP15.55■□□□□ 0.08
SSBP3-210ENST00000525990 LDHDQ86WU2 507 aa15.55■□□□□ 0.08
SSBP3-210ENST00000525990 MPNDQ8N594 471 aa15.55■□□□□ 0.08
SSBP3-210ENST00000525990 GPR101Q96P66 508 aaPredicted RBP15.55■□□□□ 0.08
SSBP3-210ENST00000525990 CCDC85AQ96PX6 553 aaPredicted RBP15.55■□□□□ 0.08
SSBP3-210ENST00000525990 METTL22Q9BUU2 404 aaPredicted RBP15.55■□□□□ 0.08
SSBP3-210ENST00000525990 RTFDC1Q9BY42 306 aaPredicted RBP15.55■□□□□ 0.08
SSBP3-210ENST00000525990 SPINK5Q9NQ38 1064 aaPredicted RBP15.55■□□□□ 0.08
SSBP3-210ENST00000525990 SEC31BQ9NQW1 1179 aa15.55■□□□□ 0.08
SSBP3-210ENST00000525990 MAP3K2Q9Y2U5 619 aa15.55■□□□□ 0.08
SSBP3-210ENST00000525990 IGKV5-2P06315 115 aa15.54■□□□□ 0.08
SSBP3-210ENST00000525990 GRIPAP1Q4V328 841 aa15.54■□□□□ 0.08
SSBP3-210ENST00000525990 MAP1SQ66K74 1059 aaPredicted RBP15.54■□□□□ 0.08
SSBP3-210ENST00000525990 FAM9BQ8IZU0 186 aa15.54■□□□□ 0.08
SSBP3-210ENST00000525990 ZBTB38Q8NAP3 1195 aaPredicted RBP15.54■□□□□ 0.08
SSBP3-210ENST00000525990 TRPM7Q96QT4 1865 aa15.54■□□□□ 0.08
SSBP3-210ENST00000525990 IL16Q14005 1332 aa15.53■□□□□ 0.08
SSBP3-210ENST00000525990 PASKQ96RG2 1323 aa15.53■□□□□ 0.08
SSBP3-210ENST00000525990 PI4KAP2A4QPH2 592 aa15.53■□□□□ 0.08
SSBP3-210ENST00000525990 YDJCA8MPS7 323 aa15.53■□□□□ 0.08
SSBP3-210ENST00000525990 ITGBL1O95965 494 aaPredicted RBP15.53■□□□□ 0.08
SSBP3-210ENST00000525990 CXCL9Q07325 125 aa15.53■□□□□ 0.08
SSBP3-210ENST00000525990 CWF19L2Q2TBE0 894 aaKnown RBP15.53■□□□□ 0.08
SSBP3-210ENST00000525990 PI4KAP1Q8N8J0 262 aa15.53■□□□□ 0.08
SSBP3-210ENST00000525990 JMYQ8N9B5 988 aa15.53■□□□□ 0.08
SSBP3-210ENST00000525990 TMX4Q9H1E5 349 aaPredicted RBP15.53■□□□□ 0.08
SSBP3-210ENST00000525990 CLEC11AQ9Y240 323 aa15.53■□□□□ 0.08
SSBP3-210ENST00000525990 PSME4Q14997 1843 aa15.52■□□□□ 0.08
SSBP3-210ENST00000525990 PCCAP05165 728 aaPredicted RBP15.52■□□□□ 0.08
SSBP3-210ENST00000525990 GPSM2P81274 684 aa15.52■□□□□ 0.08
SSBP3-210ENST00000525990 FMR1Q06787 632 aaKnown RBP eCLIP15.52■□□□□ 0.089e-6■□□□□ 9.4
SSBP3-210ENST00000525990 KIAA2012Q0VF49 1180 aa15.52■□□□□ 0.08
SSBP3-210ENST00000525990 CCDC191Q8NCU4 936 aa15.52■□□□□ 0.08
SSBP3-210ENST00000525990 CWC25Q9NXE8 425 aaPredicted RBP15.52■□□□□ 0.08
SSBP3-210ENST00000525990 SHTN1A0MZ66 631 aa15.51■□□□□ 0.07
SSBP3-210ENST00000525990 RAD17O75943 681 aa15.51■□□□□ 0.07
SSBP3-210ENST00000525990 DDX58O95786 925 aaKnown RBP15.51■□□□□ 0.07
SSBP3-210ENST00000525990 SLC4A2P04920 1241 aa15.51■□□□□ 0.07
SSBP3-210ENST00000525990 EXOSC9Q06265 439 aaKnown RBP15.51■□□□□ 0.07
SSBP3-210ENST00000525990 KSR2Q6VAB6 950 aa15.51■□□□□ 0.07
SSBP3-210ENST00000525990 SUPT20HQ8NEM7 779 aa15.51■□□□□ 0.07
SSBP3-210ENST00000525990 STK31Q9BXU1 1019 aa15.51■□□□□ 0.07
SSBP3-210ENST00000525990 POLLQ9UGP5 575 aa15.51■□□□□ 0.07
SSBP3-210ENST00000525990 MKRN1Q9UHC7 482 aaKnown RBP15.51■□□□□ 0.07
SSBP3-210ENST00000525990 ZNRF3Q9ULT6 936 aa15.51■□□□□ 0.07
SSBP3-210ENST00000525990 NSFL1CQ9UNZ2 370 aaKnown RBP15.51■□□□□ 0.07
SSBP3-210ENST00000525990 ZNF646O15015 1829 aaPredicted RBP15.51■□□□□ 0.07
SSBP3-210ENST00000525990 A0A1B0GUL6 1792 aa15.51■□□□□ 0.07
SSBP3-210ENST00000525990 RIMBP2O15034 1052 aa15.5■□□□□ 0.07
SSBP3-210ENST00000525990 POLR2AP24928 1970 aaKnown RBP15.49■□□□□ 0.07
SSBP3-210ENST00000525990 PDE8AO60658 829 aa15.49■□□□□ 0.07
SSBP3-210ENST00000525990 LMOD1P29536 600 aaPredicted RBP15.49■□□□□ 0.07
SSBP3-210ENST00000525990 GMPSP49915 693 aaPredicted RBP15.49■□□□□ 0.07
SSBP3-210ENST00000525990 RPS8P62241 208 aaKnown RBP15.49■□□□□ 0.07
SSBP3-210ENST00000525990 TMC4Q7Z404 712 aa15.49■□□□□ 0.07
SSBP3-210ENST00000525990 PNMA8AQ86V59 439 aaPredicted RBP15.49■□□□□ 0.07
SSBP3-210ENST00000525990 CNTROBQ8N137 903 aa15.49■□□□□ 0.07
SSBP3-210ENST00000525990 VPS33BQ9H267 617 aa15.49■□□□□ 0.07
SSBP3-210ENST00000525990 DBNDD1Q9H9R9 158 aa15.49■□□□□ 0.07
SSBP3-210ENST00000525990 KCNQ5Q9NR82 932 aa15.49■□□□□ 0.07
SSBP3-210ENST00000525990 CREBZFQ9NS37 354 aa15.49■□□□□ 0.07
SSBP3-210ENST00000525990 GPRC5DQ9NZD1 345 aa15.49■□□□□ 0.07
SSBP3-210ENST00000525990 NEURL1BA8MQ27 555 aa15.48■□□□□ 0.07
SSBP3-210ENST00000525990 C6orf229H3BNL8 230 aa15.48■□□□□ 0.07
SSBP3-210ENST00000525990 VAMP4O75379 141 aa15.48■□□□□ 0.07
SSBP3-210ENST00000525990 FLIIQ13045 1269 aa15.48■□□□□ 0.07
SSBP3-210ENST00000525990 NCBP3Q53F19 620 aaKnown RBP15.48■□□□□ 0.07
SSBP3-210ENST00000525990 CIAPIN1Q6FI81 312 aa15.48■□□□□ 0.07
SSBP3-210ENST00000525990 WDR63Q8IWG1 891 aa15.48■□□□□ 0.07
SSBP3-210ENST00000525990 CDHR2Q9BYE9 1310 aa15.47■□□□□ 0.07
SSBP3-210ENST00000525990 WTIPA6NIX2 430 aaPredicted RBP15.47■□□□□ 0.07
SSBP3-210ENST00000525990 DOK7Q18PE1 504 aa15.47■□□□□ 0.07
SSBP3-210ENST00000525990 WASHC4Q2M389 1173 aa15.47■□□□□ 0.07
SSBP3-210ENST00000525990 CCDC152Q4G0S7 254 aa15.47■□□□□ 0.07
SSBP3-210ENST00000525990 ZBTB12Q9Y330 459 aaPredicted RBP15.47■□□□□ 0.07
SSBP3-210ENST00000525990 PCNTO95613 3336 aa15.47■□□□□ 0.07
SSBP3-210ENST00000525990 RTL9Q8NET4 1388 aa15.47■□□□□ 0.07
SSBP3-210ENST00000525990 TRAF5O00463 557 aa15.46■□□□□ 0.07
SSBP3-210ENST00000525990 CTSWP56202 376 aa15.46■□□□□ 0.07
SSBP3-210ENST00000525990 UBE3BQ7Z3V4 1068 aa15.46■□□□□ 0.07
SSBP3-210ENST00000525990 TBC1D16Q8TBP0 767 aa15.46■□□□□ 0.07
SSBP3-210ENST00000525990 TRPM4Q8TD43 1214 aa15.46■□□□□ 0.07
SSBP3-210ENST00000525990 CNTNAP1P78357 1384 aa15.46■□□□□ 0.07
SSBP3-210ENST00000525990 F6X3S4 739 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms