RNA–Protein interactions for RNA: ENST00000525936.1

EXOSC4-202, Transcript of exosome component 4, humanhuman

TSL 3 BASIC

Gene EXOSC4, Length 606 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-202ENST00000525936 GRAPQ13588 217 aa25.11■■□□□ 1.61
EXOSC4-202ENST00000525936 UBE3BQ7Z3V4 1068 aa25.11■■□□□ 1.61
EXOSC4-202ENST00000525936 ZNF784Q8NCA9 323 aaPredicted RBP25.11■■□□□ 1.61
EXOSC4-202ENST00000525936 GRAPLQ8TC17 118 aaPredicted RBP25.11■■□□□ 1.61
EXOSC4-202ENST00000525936 PLA2G12BQ9BX93 195 aa25.11■■□□□ 1.61
EXOSC4-202ENST00000525936 ATP6V0A2Q9Y487 856 aa25.11■■□□□ 1.61
EXOSC4-202ENST00000525936 GRIPAP1Q4V328 841 aa25.1■■□□□ 1.61
EXOSC4-202ENST00000525936 SRCIN1Q9C0H9 1055 aa25.1■■□□□ 1.61
EXOSC4-202ENST00000525936 TAOK3Q9H2K8 898 aa25.1■■□□□ 1.61
EXOSC4-202ENST00000525936 SLC4A10Q6U841 1118 aa25.09■■□□□ 1.61
EXOSC4-202ENST00000525936 SLC51AQ86UW1 340 aa25.09■■□□□ 1.61
EXOSC4-202ENST00000525936 SP8Q8IXZ3 490 aa25.09■■□□□ 1.61
EXOSC4-202ENST00000525936 NOB1Q9ULX3 412 aaKnown RBP25.09■■□□□ 1.61
EXOSC4-202ENST00000525936 TAF1P21675 1872 aa25.09■■□□□ 1.61
EXOSC4-202ENST00000525936 CCDC152Q4G0S7 254 aa25.08■■□□□ 1.61
EXOSC4-202ENST00000525936 TTLL11Q8NHH1 800 aa25.08■■□□□ 1.61
EXOSC4-202ENST00000525936 CELF1Q92879 486 aaKnown RBP25.08■■□□□ 1.61
EXOSC4-202ENST00000525936 RNF181Q9P0P0 153 aa25.08■■□□□ 1.61
EXOSC4-202ENST00000525936 COL4A1P02462 1669 aa25.07■■□□□ 1.6
EXOSC4-202ENST00000525936 CTSWP56202 376 aa25.07■■□□□ 1.6
EXOSC4-202ENST00000525936 FKBP4Q02790 459 aaKnown RBP eCLIP25.07■■□□□ 1.6
EXOSC4-202ENST00000525936 TMC4Q7Z404 712 aa25.07■■□□□ 1.6
EXOSC4-202ENST00000525936 ARHGAP45Q92619 1136 aa25.07■■□□□ 1.6
EXOSC4-202ENST00000525936 PSMD1Q99460 953 aa25.07■■□□□ 1.6
EXOSC4-202ENST00000525936 RTL9Q8NET4 1388 aa25.06■■□□□ 1.6
EXOSC4-202ENST00000525936 GRM8O00222 908 aa25.06■■□□□ 1.6
EXOSC4-202ENST00000525936 CSF1RP07333 972 aa25.06■■□□□ 1.6
EXOSC4-202ENST00000525936 SEC31BQ9NQW1 1179 aa25.06■■□□□ 1.6
EXOSC4-202ENST00000525936 UTYO14607 1347 aa25.06■■□□□ 1.6
EXOSC4-202ENST00000525936 RPS8P62241 208 aaKnown RBP25.05■■□□□ 1.6
EXOSC4-202ENST00000525936 ZC3H4Q9UPT8 1303 aaKnown RBP25.05■■□□□ 1.6
EXOSC4-202ENST00000525936 CCDC88AQ3V6T2 1871 aa25.04■■□□□ 1.6
EXOSC4-202ENST00000525936 BCAR3O75815 825 aa25.04■■□□□ 1.6
EXOSC4-202ENST00000525936 FOXO4P98177 505 aa25.03■■□□□ 1.6
EXOSC4-202ENST00000525936 API5Q9BZZ5 524 aaKnown RBP25.03■■□□□ 1.6
EXOSC4-202ENST00000525936 MYH3P11055 1940 aa25.03■■□□□ 1.6
EXOSC4-202ENST00000525936 KIF16BQ96L93 1317 aa25.03■■□□□ 1.6
EXOSC4-202ENST00000525936 RTFDC1Q9BY42 306 aaPredicted RBP25.02■■□□□ 1.6
EXOSC4-202ENST00000525936 GREM2Q9H772 168 aa25.02■■□□□ 1.6
EXOSC4-202ENST00000525936 C9orf78Q9NZ63 289 aaPredicted RBP25.02■■□□□ 1.6
EXOSC4-202ENST00000525936 DICER1Q9UPY3 1922 aaKnown RBP25.02■■□□□ 1.6
EXOSC4-202ENST00000525936 LRRC37AA6NMS7 1700 aa25.01■■□□□ 1.59
EXOSC4-202ENST00000525936 CCDC85AQ96PX6 553 aaPredicted RBP25.01■■□□□ 1.59
EXOSC4-202ENST00000525936 ZNF277Q9NRM2 450 aaPredicted RBP25.01■■□□□ 1.59
EXOSC4-202ENST00000525936 NBPF7P0C2Y1 421 aaPredicted RBP25■■□□□ 1.59
EXOSC4-202ENST00000525936 KAZALD1Q96I82 304 aa25■■□□□ 1.59
EXOSC4-202ENST00000525936 USP44Q9H0E7 712 aa25■■□□□ 1.59
EXOSC4-202ENST00000525936 TMX4Q9H1E5 349 aaPredicted RBP25■■□□□ 1.59
EXOSC4-202ENST00000525936 CCT4P50991 539 aaKnown RBP24.99■■□□□ 1.59
EXOSC4-202ENST00000525936 EPHA10Q5JZY3 1008 aa24.99■■□□□ 1.59
EXOSC4-202ENST00000525936 IPO8O15397 1037 aaKnown RBP24.98■■□□□ 1.59
EXOSC4-202ENST00000525936 IARSP41252 1262 aaKnown RBP24.98■■□□□ 1.59
EXOSC4-202ENST00000525936 MPNDQ8N594 471 aa24.98■■□□□ 1.59
EXOSC4-202ENST00000525936 VPS33BQ9H267 617 aa24.98■■□□□ 1.59
EXOSC4-202ENST00000525936 CDC5LQ99459 802 aaKnown RBP24.97■■□□□ 1.59
EXOSC4-202ENST00000525936 DPP8Q6V1X1 898 aaPredicted RBP24.96■■□□□ 1.59
EXOSC4-202ENST00000525936 ATF7IPQ6VMQ6 1270 aa24.96■■□□□ 1.59
EXOSC4-202ENST00000525936 ANKRD18AQ8IVF6 992 aa24.96■■□□□ 1.59
EXOSC4-202ENST00000525936 TRIM27P14373 513 aa24.95■■□□□ 1.58
EXOSC4-202ENST00000525936 ITGA6P23229 1130 aa24.95■■□□□ 1.58
EXOSC4-202ENST00000525936 FAM161AQ3B820 660 aa24.95■■□□□ 1.58
EXOSC4-202ENST00000525936 INTS3Q68E01 1043 aaKnown RBP24.95■■□□□ 1.58
EXOSC4-202ENST00000525936 LMBR1LQ6UX01 489 aa24.95■■□□□ 1.58
EXOSC4-202ENST00000525936 SUCLG2Q96I99 432 aa24.95■■□□□ 1.58
EXOSC4-202ENST00000525936 BSDC1Q9NW68 430 aaPredicted RBP24.95■■□□□ 1.58
EXOSC4-202ENST00000525936 PODXL2Q9NZ53 605 aa24.95■■□□□ 1.58
EXOSC4-202ENST00000525936 LTBP1Q14766 1721 aa24.95■■□□□ 1.58
EXOSC4-202ENST00000525936 TIAM2Q8IVF5 1701 aa24.95■■□□□ 1.58
EXOSC4-202ENST00000525936 DUOX1Q9NRD9 1551 aa24.94■■□□□ 1.58
EXOSC4-202ENST00000525936 GPSM2P81274 684 aa24.94■■□□□ 1.58
EXOSC4-202ENST00000525936 SUPT20HQ8NEM7 779 aa24.94■■□□□ 1.58
EXOSC4-202ENST00000525936 GLTPD2A6NH11 291 aa24.93■■□□□ 1.58
EXOSC4-202ENST00000525936 FZD9O00144 591 aa24.93■■□□□ 1.58
EXOSC4-202ENST00000525936 RABL6Q3YEC7 729 aaPredicted RBP24.93■■□□□ 1.58
EXOSC4-202ENST00000525936 GPBP1L1Q9HC44 474 aaPredicted RBP24.93■■□□□ 1.58
EXOSC4-202ENST00000525936 NSFL1CQ9UNZ2 370 aaKnown RBP24.93■■□□□ 1.58
EXOSC4-202ENST00000525936 COL4A5P29400 1685 aa24.93■■□□□ 1.58
EXOSC4-202ENST00000525936 ZNF526Q8TF50 670 aaPredicted RBP24.92■■□□□ 1.58
EXOSC4-202ENST00000525936 FRAT1Q92837 279 aaPredicted RBP24.92■■□□□ 1.58
EXOSC4-202ENST00000525936 POLLQ9UGP5 575 aa24.92■■□□□ 1.58
EXOSC4-202ENST00000525936 ZKSCAN2Q63HK3 967 aa24.91■■□□□ 1.58
EXOSC4-202ENST00000525936 MINPP1Q9UNW1 487 aa24.91■■□□□ 1.58
EXOSC4-202ENST00000525936 TNNQ9UQP3 1299 aa24.91■■□□□ 1.58
EXOSC4-202ENST00000525936 ANKRD18BA2A2Z9 1011 aa24.9■■□□□ 1.58
EXOSC4-202ENST00000525936 KIAA2012Q0VF49 1180 aa24.9■■□□□ 1.58
EXOSC4-202ENST00000525936 IFIT5Q13325 482 aaKnown RBP24.9■■□□□ 1.58
EXOSC4-202ENST00000525936 ANKRD44Q8N8A2 993 aa24.9■■□□□ 1.58
EXOSC4-202ENST00000525936 TBC1D16Q8TBP0 767 aa24.9■■□□□ 1.58
EXOSC4-202ENST00000525936 BICC1Q9H694 974 aaKnown RBP24.9■■□□□ 1.58
EXOSC4-202ENST00000525936 KDM2BQ8NHM5 1336 aa24.89■■□□□ 1.58
EXOSC4-202ENST00000525936 IGHMBP2P38935 993 aaKnown RBP24.89■■□□□ 1.58
EXOSC4-202ENST00000525936 LARGE2Q8N3Y3 721 aa24.89■■□□□ 1.58
EXOSC4-202ENST00000525936 JDP2Q8WYK2 163 aa24.89■■□□□ 1.58
EXOSC4-202ENST00000525936 PPIP5K2O43314 1243 aa24.88■■□□□ 1.57
EXOSC4-202ENST00000525936 AOC3Q16853 763 aa24.88■■□□□ 1.57
EXOSC4-202ENST00000525936 DPY19L2Q6NUT2 758 aa24.88■■□□□ 1.57
EXOSC4-202ENST00000525936 NMRK2Q9NPI5 230 aa24.87■■□□□ 1.57
EXOSC4-202ENST00000525936 XDHP47989 1333 aa24.86■■□□□ 1.57
EXOSC4-202ENST00000525936 KIF3CO14782 793 aa24.86■■□□□ 1.57
EXOSC4-202ENST00000525936 CCDC57Q2TAC2 916 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms