RNA–Protein interactions for RNA: ENST00000525854.5

HIF3A-209, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-209ENST00000525854 HTRA3P83110 453 aa14.96□□□□□ -0.01
HIF3A-209ENST00000525854 TWISTNBQ3B726 338 aaPredicted RBP14.96□□□□□ -0.01
HIF3A-209ENST00000525854 PNMA8AQ86V59 439 aaPredicted RBP14.96□□□□□ -0.01
HIF3A-209ENST00000525854 ZNF428Q96B54 188 aa14.96□□□□□ -0.01
HIF3A-209ENST00000525854 KLRG1Q96E93 195 aa14.96□□□□□ -0.01
HIF3A-209ENST00000525854 MYD88Q99836 296 aa14.96□□□□□ -0.01
HIF3A-209ENST00000525854 LMOD1P29536 600 aaPredicted RBP14.95□□□□□ -0.02
HIF3A-209ENST00000525854 AOC3Q16853 763 aa14.95□□□□□ -0.02
HIF3A-209ENST00000525854 EAPPQ56P03 285 aaPredicted RBP14.95□□□□□ -0.02
HIF3A-209ENST00000525854 RTL5Q5HYW3 569 aaPredicted RBP14.95□□□□□ -0.02
HIF3A-209ENST00000525854 WDR63Q8IWG1 891 aa14.95□□□□□ -0.02
HIF3A-209ENST00000525854 METTL22Q9BUU2 404 aaPredicted RBP14.95□□□□□ -0.02
HIF3A-209ENST00000525854 CWC25Q9NXE8 425 aaPredicted RBP14.95□□□□□ -0.02
HIF3A-209ENST00000525854 GJA3Q9Y6H8 435 aa14.95□□□□□ -0.02
HIF3A-209ENST00000525854 SCN4AP35499 1836 aa14.94□□□□□ -0.02
HIF3A-209ENST00000525854 POTEIP0CG38 1075 aa14.94□□□□□ -0.02
HIF3A-209ENST00000525854 POTEJP0CG39 1038 aa14.94□□□□□ -0.02
HIF3A-209ENST00000525854 KSR2Q6VAB6 950 aa14.94□□□□□ -0.02
HIF3A-209ENST00000525854 SLC51AQ86UW1 340 aa14.94□□□□□ -0.02
HIF3A-209ENST00000525854 ZNRF3Q9ULT6 936 aa14.94□□□□□ -0.02
HIF3A-209ENST00000525854 PCCAP05165 728 aaPredicted RBP14.93□□□□□ -0.02
HIF3A-209ENST00000525854 KIAA2012Q0VF49 1180 aa14.93□□□□□ -0.02
HIF3A-209ENST00000525854 NEXNQ0ZGT2 675 aa14.93□□□□□ -0.02
HIF3A-209ENST00000525854 CLEC11AQ9Y240 323 aa14.93□□□□□ -0.02
HIF3A-209ENST00000525854 MAP3K2Q9Y2U5 619 aa14.93□□□□□ -0.02
HIF3A-209ENST00000525854 COL4A5P29400 1685 aa14.93□□□□□ -0.02
HIF3A-209ENST00000525854 PI4KAP2A4QPH2 592 aa14.92□□□□□ -0.02
HIF3A-209ENST00000525854 SLC4A2P04920 1241 aa14.92□□□□□ -0.02
HIF3A-209ENST00000525854 CCDC152Q4G0S7 254 aa14.92□□□□□ -0.02
HIF3A-209ENST00000525854 PI4KAP1Q8N8J0 262 aa14.92□□□□□ -0.02
HIF3A-209ENST00000525854 JMYQ8N9B5 988 aa14.92□□□□□ -0.02
HIF3A-209ENST00000525854 CELF1Q92879 486 aaKnown RBP14.92□□□□□ -0.02
HIF3A-209ENST00000525854 SALL2Q9Y467 1007 aaPredicted RBP14.92□□□□□ -0.02
HIF3A-209ENST00000525854 LAMB2P55268 1798 aa14.92□□□□□ -0.02
HIF3A-209ENST00000525854 FANCIQ9NVI1 1328 aa14.92□□□□□ -0.02
HIF3A-209ENST00000525854 PDE8AO60658 829 aa14.91□□□□□ -0.02
HIF3A-209ENST00000525854 RPS8P62241 208 aaKnown RBP14.91□□□□□ -0.02
HIF3A-209ENST00000525854 FAM9BQ8IZU0 186 aa14.91□□□□□ -0.02
HIF3A-209ENST00000525854 CREBZFQ9NS37 354 aa14.91□□□□□ -0.02
HIF3A-209ENST00000525854 NSFL1CQ9UNZ2 370 aaKnown RBP14.91□□□□□ -0.02
HIF3A-209ENST00000525854 SCNN1DP51172 638 aa14.9□□□□□ -0.02
HIF3A-209ENST00000525854 TNIP1Q15025 636 aa14.9□□□□□ -0.02
HIF3A-209ENST00000525854 PASKQ96RG2 1323 aa14.9□□□□□ -0.02
HIF3A-209ENST00000525854 CDHR2Q9BYE9 1310 aa14.9□□□□□ -0.02
HIF3A-209ENST00000525854 DDX60Q8IY21 1712 aaKnown RBP14.89□□□□□ -0.03
HIF3A-209ENST00000525854 CXCL9Q07325 125 aa14.89□□□□□ -0.03
HIF3A-209ENST00000525854 WASHC4Q2M389 1173 aa14.89□□□□□ -0.03
HIF3A-209ENST00000525854 CIAPIN1Q6FI81 312 aa14.89□□□□□ -0.03
HIF3A-209ENST00000525854 EYA3Q99504 573 aa14.89□□□□□ -0.03
HIF3A-209ENST00000525854 MYH16Q9H6N6 1097 aa14.89□□□□□ -0.03
HIF3A-209ENST00000525854 C6orf229H3BNL8 230 aa14.88□□□□□ -0.03
HIF3A-209ENST00000525854 ITGBL1O95965 494 aaPredicted RBP14.88□□□□□ -0.03
HIF3A-209ENST00000525854 IGKV5-2P06315 115 aa14.88□□□□□ -0.03
HIF3A-209ENST00000525854 EPS15P42566 896 aa14.88□□□□□ -0.03
HIF3A-209ENST00000525854 GPSM2P81274 684 aa14.88□□□□□ -0.03
HIF3A-209ENST00000525854 FLIIQ13045 1269 aa14.88□□□□□ -0.03
HIF3A-209ENST00000525854 USP50Q70EL3 339 aaPredicted RBP14.88□□□□□ -0.03
HIF3A-209ENST00000525854 CNTROBQ8N137 903 aa14.88□□□□□ -0.03
HIF3A-209ENST00000525854 GPRC5DQ9NZD1 345 aa14.88□□□□□ -0.03
HIF3A-209ENST00000525854 NEURL1BA8MQ27 555 aa14.87□□□□□ -0.03
HIF3A-209ENST00000525854 VAMP4O75379 141 aa14.87□□□□□ -0.03
HIF3A-209ENST00000525854 EXOSC9Q06265 439 aaKnown RBP14.87□□□□□ -0.03
HIF3A-209ENST00000525854 FKBP5Q13451 457 aaPredicted RBP14.87□□□□□ -0.03
HIF3A-209ENST00000525854 MAP1SQ66K74 1059 aaPredicted RBP14.87□□□□□ -0.03
HIF3A-209ENST00000525854 G2E3Q7L622 706 aa14.87□□□□□ -0.03
HIF3A-209ENST00000525854 JARID2Q92833 1246 aaPredicted RBP14.87□□□□□ -0.03
HIF3A-209ENST00000525854 BCL2L13Q9BXK5 485 aa14.87□□□□□ -0.03
HIF3A-209ENST00000525854 SEC31BQ9NQW1 1179 aa14.87□□□□□ -0.03
HIF3A-209ENST00000525854 LRRC37AA6NMS7 1700 aa14.86□□□□□ -0.03
HIF3A-209ENST00000525854 TMEM88BA6NKF7 163 aa14.86□□□□□ -0.03
HIF3A-209ENST00000525854 RAD17O75943 681 aa14.86□□□□□ -0.03
HIF3A-209ENST00000525854 GMPSP49915 693 aaPredicted RBP14.86□□□□□ -0.03
HIF3A-209ENST00000525854 CTSWP56202 376 aa14.86□□□□□ -0.03
HIF3A-209ENST00000525854 ANKRD18AQ8IVF6 992 aa14.86□□□□□ -0.03
HIF3A-209ENST00000525854 CDC5LQ99459 802 aaKnown RBP14.86□□□□□ -0.03
HIF3A-209ENST00000525854 ADARB2Q9NS39 739 aaKnown RBP14.86□□□□□ -0.03
HIF3A-209ENST00000525854 PODXL2Q9NZ53 605 aa14.86□□□□□ -0.03
HIF3A-209ENST00000525854 ANKIB1Q9P2G1 1089 aa14.86□□□□□ -0.03
HIF3A-209ENST00000525854 POLLQ9UGP5 575 aa14.86□□□□□ -0.03
HIF3A-209ENST00000525854 RIMBP2O15034 1052 aa14.85□□□□□ -0.03
HIF3A-209ENST00000525854 CWF19L2Q2TBE0 894 aaKnown RBP14.85□□□□□ -0.03
HIF3A-209ENST00000525854 TBC1D16Q8TBP0 767 aa14.85□□□□□ -0.03
HIF3A-209ENST00000525854 DNAAF4Q8WXU2 420 aa14.85□□□□□ -0.03
HIF3A-209ENST00000525854 CCDC85AQ96PX6 553 aaPredicted RBP14.85□□□□□ -0.03
HIF3A-209ENST00000525854 ZC3H12CQ9C0D7 883 aaKnown RBP14.85□□□□□ -0.03
HIF3A-209ENST00000525854 GGA1Q9UJY5 639 aa14.85□□□□□ -0.03
HIF3A-209ENST00000525854 DUOX1Q9NRD9 1551 aa14.85□□□□□ -0.03
HIF3A-209ENST00000525854 TAF1P21675 1872 aa14.84□□□□□ -0.03
HIF3A-209ENST00000525854 ADAMTSL1Q8N6G6 1762 aa14.84□□□□□ -0.03
HIF3A-209ENST00000525854 YDJCA8MPS7 323 aa14.84□□□□□ -0.03
HIF3A-209ENST00000525854 H7C1W4 665 aa14.84□□□□□ -0.03
HIF3A-209ENST00000525854 UFL1O94874 794 aa14.84□□□□□ -0.03
HIF3A-209ENST00000525854 GCKRQ14397 625 aa14.84□□□□□ -0.03
HIF3A-209ENST00000525854 UBE3BQ7Z3V4 1068 aa14.84□□□□□ -0.03
HIF3A-209ENST00000525854 LINS1Q8NG48 757 aa14.84□□□□□ -0.03
HIF3A-209ENST00000525854 TTLL11Q8NHH1 800 aa14.84□□□□□ -0.03
HIF3A-209ENST00000525854 G3V3G9 751 aa14.83□□□□□ -0.04
HIF3A-209ENST00000525854 H7C1D1 291 aa14.83□□□□□ -0.04
HIF3A-209ENST00000525854 DCAF8Q5TAQ9 597 aa14.83□□□□□ -0.04
HIF3A-209ENST00000525854 DBNDD1Q9H9R9 158 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms