RNA–Protein interactions for RNA: ENST00000525167.1

TSKU-202, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-202ENST00000525167 TRIM35Q9UPQ4 493 aa22.37■■□□□ 1.17
TSKU-202ENST00000525167 THSD7BQ9C0I4 1608 aa22.36■■□□□ 1.17
TSKU-202ENST00000525167 WDR43Q15061 677 aaKnown RBP eCLIP22.36■■□□□ 1.17
TSKU-202ENST00000525167 NEUROD2Q15784 382 aa22.36■■□□□ 1.17
TSKU-202ENST00000525167 PLBD2Q8NHP8 589 aa22.36■■□□□ 1.17
TSKU-202ENST00000525167 CHPF2Q9P2E5 772 aa22.36■■□□□ 1.17
TSKU-202ENST00000525167 ECE1P42892 770 aa22.35■■□□□ 1.17
TSKU-202ENST00000525167 TNIP1Q15025 636 aa22.35■■□□□ 1.17
TSKU-202ENST00000525167 HDGFL1Q5TGJ6 251 aa22.35■■□□□ 1.17
TSKU-202ENST00000525167 CCDC146Q8IYE0 955 aa22.35■■□□□ 1.17
TSKU-202ENST00000525167 DBF4Q9UBU7 674 aaPredicted RBP22.35■■□□□ 1.17
TSKU-202ENST00000525167 LRRC37AA6NMS7 1700 aa22.34■■□□□ 1.17
TSKU-202ENST00000525167 KRT24Q2M2I5 525 aa22.34■■□□□ 1.17
TSKU-202ENST00000525167 CIAPIN1Q6FI81 312 aa22.34■■□□□ 1.17
TSKU-202ENST00000525167 TRPM7Q96QT4 1865 aa22.34■■□□□ 1.17
TSKU-202ENST00000525167 ANKRD13DQ6ZTN6 518 aa22.33■■□□□ 1.17
TSKU-202ENST00000525167 ZC3H15Q8WU90 426 aaKnown RBP22.33■■□□□ 1.17
TSKU-202ENST00000525167 PGAP2Q9UHJ9 254 aa22.33■■□□□ 1.17
TSKU-202ENST00000525167 LAS1LQ9Y4W2 734 aaKnown RBP22.33■■□□□ 1.17
TSKU-202ENST00000525167 GMPSP49915 693 aaPredicted RBP22.32■■□□□ 1.16
TSKU-202ENST00000525167 CST9Q5W186 159 aa22.32■■□□□ 1.16
TSKU-202ENST00000525167 CFAP44Q96MT7 982 aa22.32■■□□□ 1.16
TSKU-202ENST00000525167 ISCA1Q9BUE6 129 aa22.32■■□□□ 1.16
TSKU-202ENST00000525167 HYPKQ9NX55 129 aa22.32■■□□□ 1.16
TSKU-202ENST00000525167 TLL2Q9Y6L7 1015 aa22.32■■□□□ 1.16
TSKU-202ENST00000525167 DUOX1Q9NRD9 1551 aa22.32■■□□□ 1.16
TSKU-202ENST00000525167 DDX60Q8IY21 1712 aaKnown RBP22.31■■□□□ 1.16
TSKU-202ENST00000525167 LBX1P52954 281 aa22.31■■□□□ 1.16
TSKU-202ENST00000525167 DDX10Q13206 875 aaKnown RBP22.31■■□□□ 1.16
TSKU-202ENST00000525167 SF3B3Q15393 1217 aaKnown RBP22.31■■□□□ 1.16
TSKU-202ENST00000525167 CAPNS2Q96L46 248 aa22.31■■□□□ 1.16
TSKU-202ENST00000525167 TRAF5O00463 557 aa22.3■■□□□ 1.16
TSKU-202ENST00000525167 HSPA8P11142 646 aaKnown RBP22.3■■□□□ 1.16
TSKU-202ENST00000525167 TRIM28Q13263 835 aaKnown RBP22.3■■□□□ 1.16
TSKU-202ENST00000525167 BCL2L13Q9BXK5 485 aa22.3■■□□□ 1.16
TSKU-202ENST00000525167 FMR1Q06787 632 aaKnown RBP eCLIP22.29■■□□□ 1.16
TSKU-202ENST00000525167 ADAMTS8Q9UP79 889 aa22.29■■□□□ 1.16
TSKU-202ENST00000525167 RAD17O75943 681 aa22.28■■□□□ 1.16
TSKU-202ENST00000525167 HHIPL1Q96JK4 782 aa22.28■■□□□ 1.16
TSKU-202ENST00000525167 BEGAINQ9BUH8 593 aa22.28■■□□□ 1.16
TSKU-202ENST00000525167 MAP2K2P36507 400 aa22.27■■□□□ 1.16
TSKU-202ENST00000525167 DUSP27Q5VZP5 1158 aa22.27■■□□□ 1.16
TSKU-202ENST00000525167 PAXIP1Q6ZW49 1069 aaPredicted RBP22.27■■□□□ 1.16
TSKU-202ENST00000525167 FAM89AQ96GI7 184 aa22.27■■□□□ 1.16
TSKU-202ENST00000525167 GPR101Q96P66 508 aaPredicted RBP22.27■■□□□ 1.16
TSKU-202ENST00000525167 YDJCA8MPS7 323 aa22.26■■□□□ 1.15
TSKU-202ENST00000525167 HSP90B1P14625 803 aaKnown RBP22.26■■□□□ 1.15
TSKU-202ENST00000525167 WASHC4Q2M389 1173 aa22.26■■□□□ 1.15
TSKU-202ENST00000525167 CYP4F22Q6NT55 531 aa22.26■■□□□ 1.15
TSKU-202ENST00000525167 SAPCD2Q86UD0 394 aa22.26■■□□□ 1.15
TSKU-202ENST00000525167 DPF2Q92785 391 aa22.26■■□□□ 1.15
TSKU-202ENST00000525167 ATP5J2-PTCD1G3V325 749 aa22.25■■□□□ 1.15
TSKU-202ENST00000525167 H7C1D1 291 aa22.25■■□□□ 1.15
TSKU-202ENST00000525167 CELF2O95319 508 aaKnown RBP22.25■■□□□ 1.15
TSKU-202ENST00000525167 CALD1Q05682 793 aaKnown RBP22.25■■□□□ 1.15
TSKU-202ENST00000525167 CDC37L1Q7L3B6 337 aa22.25■■□□□ 1.15
TSKU-202ENST00000525167 CELF1Q92879 486 aaKnown RBP22.25■■□□□ 1.15
TSKU-202ENST00000525167 MBIPQ9NS73 344 aa22.25■■□□□ 1.15
TSKU-202ENST00000525167 CNOT7Q9UIV1 285 aaKnown RBP22.25■■□□□ 1.15
TSKU-202ENST00000525167 TAF1P21675 1872 aa22.25■■□□□ 1.15
TSKU-202ENST00000525167 ZNF853P0CG23 659 aa22.24■■□□□ 1.15
TSKU-202ENST00000525167 HIRAP54198 1017 aaPredicted RBP22.24■■□□□ 1.15
TSKU-202ENST00000525167 EYA3Q99504 573 aa22.24■■□□□ 1.15
TSKU-202ENST00000525167 GLIS2Q9BZE0 524 aaPredicted RBP22.24■■□□□ 1.15
TSKU-202ENST00000525167 NSFL1CQ9UNZ2 370 aaKnown RBP22.24■■□□□ 1.15
TSKU-202ENST00000525167 IRS4O14654 1257 aaPredicted RBP22.23■■□□□ 1.15
TSKU-202ENST00000525167 GOLGA2Q08379 1002 aa22.23■■□□□ 1.15
TSKU-202ENST00000525167 TRPM4Q8TD43 1214 aa22.23■■□□□ 1.15
TSKU-202ENST00000525167 IFT57Q9NWB7 429 aa22.23■■□□□ 1.15
TSKU-202ENST00000525167 CA12O43570 354 aa22.22■■□□□ 1.15
TSKU-202ENST00000525167 RPS12P25398 132 aaKnown RBP22.22■■□□□ 1.15
TSKU-202ENST00000525167 MICALL2Q8IY33 904 aa22.22■■□□□ 1.15
TSKU-202ENST00000525167 ZBTB38Q8NAP3 1195 aaPredicted RBP22.22■■□□□ 1.15
TSKU-202ENST00000525167 CHMP4AQ9BY43 222 aa22.22■■□□□ 1.15
TSKU-202ENST00000525167 C6orf229H3BNL8 230 aa22.21■■□□□ 1.15
TSKU-202ENST00000525167 RPS8P62241 208 aaKnown RBP22.21■■□□□ 1.15
TSKU-202ENST00000525167 GNAI1P63096 354 aa22.21■■□□□ 1.15
TSKU-202ENST00000525167 GRM1Q13255 1194 aa22.21■■□□□ 1.15
TSKU-202ENST00000525167 RIC3Q7Z5B4 369 aa22.21■■□□□ 1.15
TSKU-202ENST00000525167 PRKRIP1Q9H875 184 aaPredicted RBP22.21■■□□□ 1.15
TSKU-202ENST00000525167 POLLQ9UGP5 575 aa22.21■■□□□ 1.15
TSKU-202ENST00000525167 PSMD14O00487 310 aa22.2■■□□□ 1.14
TSKU-202ENST00000525167 GPSM2P81274 684 aa22.2■■□□□ 1.14
TSKU-202ENST00000525167 ZNF428Q96B54 188 aa22.2■■□□□ 1.14
TSKU-202ENST00000525167 DBNDD1Q9H9R9 158 aa22.2■■□□□ 1.14
TSKU-202ENST00000525167 PODXL2Q9NZ53 605 aa22.2■■□□□ 1.14
TSKU-202ENST00000525167 BRPF1P55201 1214 aaPredicted RBP22.19■■□□□ 1.14
TSKU-202ENST00000525167 CCDC191Q8NCU4 936 aa22.19■■□□□ 1.14
TSKU-202ENST00000525167 TBC1D16Q8TBP0 767 aa22.19■■□□□ 1.14
TSKU-202ENST00000525167 ZBTB12Q9Y330 459 aaPredicted RBP22.19■■□□□ 1.14
TSKU-202ENST00000525167 ECE2O60344 883 aa22.18■■□□□ 1.14
TSKU-202ENST00000525167 RTL5Q5HYW3 569 aaPredicted RBP22.18■■□□□ 1.14
TSKU-202ENST00000525167 ABHD8Q96I13 439 aa22.18■■□□□ 1.14
TSKU-202ENST00000525167 COL4A1P02462 1669 aa22.17■■□□□ 1.14
TSKU-202ENST00000525167 SHTN1A0MZ66 631 aa22.17■■□□□ 1.14
TSKU-202ENST00000525167 AOC2O75106 756 aa22.17■■□□□ 1.14
TSKU-202ENST00000525167 ZC3H12CQ9C0D7 883 aaKnown RBP22.17■■□□□ 1.14
TSKU-202ENST00000525167 ZNF408Q9H9D4 720 aa22.17■■□□□ 1.14
TSKU-202ENST00000525167 APAF1O14727 1248 aa22.16■■□□□ 1.14
TSKU-202ENST00000525167 RIMBP2O15034 1052 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms