RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 IBTKQ9P2D0 1353 aaPredicted RBP5.8□□□□□ -1.48
CHMP4A-202ENST00000524955 NRXN2Q9P2S2 1712 aa5.8□□□□□ -1.48
CHMP4A-202ENST00000524955 ANKRD31Q8N7Z5 1873 aa5.8□□□□□ -1.48
CHMP4A-202ENST00000524955 KLRG2A4D1S0 409 aaPredicted RBP5.8□□□□□ -1.48
CHMP4A-202ENST00000524955 PPEF1O14829 653 aaPredicted RBP5.8□□□□□ -1.48
CHMP4A-202ENST00000524955 ALDH1L1O75891 902 aa5.8□□□□□ -1.48
CHMP4A-202ENST00000524955 UBTFL1P0CB47 393 aaPredicted RBP5.8□□□□□ -1.48
CHMP4A-202ENST00000524955 CCT4P50991 539 aaKnown RBP5.8□□□□□ -1.48
CHMP4A-202ENST00000524955 INTS3Q68E01 1043 aaKnown RBP5.8□□□□□ -1.48
CHMP4A-202ENST00000524955 STYK1Q6J9G0 422 aa5.8□□□□□ -1.48
CHMP4A-202ENST00000524955 DDX46Q7L014 1031 aaKnown RBP5.8□□□□□ -1.48
CHMP4A-202ENST00000524955 TTLL11Q8NHH1 800 aa5.8□□□□□ -1.48
CHMP4A-202ENST00000524955 ARHGAP45Q92619 1136 aa5.8□□□□□ -1.48
CHMP4A-202ENST00000524955 RBM17Q96I25 401 aaKnown RBP5.8□□□□□ -1.48
CHMP4A-202ENST00000524955 BICC1Q9H694 974 aaKnown RBP5.8□□□□□ -1.48
CHMP4A-202ENST00000524955 LRRFIP2Q9Y608 721 aaKnown RBP5.8□□□□□ -1.48
CHMP4A-202ENST00000524955 COL11A2P13942 1736 aaPredicted RBP5.79□□□□□ -1.48
CHMP4A-202ENST00000524955 KIAA1551Q9HCM1 1747 aa5.79□□□□□ -1.48
CHMP4A-202ENST00000524955 CDHR2Q9BYE9 1310 aa5.79□□□□□ -1.48
CHMP4A-202ENST00000524955 SNAP23O00161 211 aa5.79□□□□□ -1.48
CHMP4A-202ENST00000524955 ITGA6P23229 1130 aa5.79□□□□□ -1.48
CHMP4A-202ENST00000524955 PRELPP51888 382 aa5.79□□□□□ -1.48
CHMP4A-202ENST00000524955 RRP1P56182 461 aaKnown RBP5.79□□□□□ -1.48
CHMP4A-202ENST00000524955 GRAPQ13588 217 aa5.79□□□□□ -1.48
CHMP4A-202ENST00000524955 SF3B3Q15393 1217 aaKnown RBP5.79□□□□□ -1.48
CHMP4A-202ENST00000524955 ANKRD44Q8N8A2 993 aa5.79□□□□□ -1.48
CHMP4A-202ENST00000524955 HELBQ8NG08 1087 aaPredicted RBP5.79□□□□□ -1.48
CHMP4A-202ENST00000524955 GRAPLQ8TC17 118 aaPredicted RBP5.79□□□□□ -1.48
CHMP4A-202ENST00000524955 CNKSR1Q969H4 720 aa5.79□□□□□ -1.48
CHMP4A-202ENST00000524955 PUS3Q9BZE2 481 aaKnown RBP5.79□□□□□ -1.48
CHMP4A-202ENST00000524955 BCL11AQ9H165 835 aa5.79□□□□□ -1.48
CHMP4A-202ENST00000524955 ANKRD36CQ5JPF3 1778 aa5.79□□□□□ -1.48
CHMP4A-202ENST00000524955 RNF123Q5XPI4 1314 aa5.78□□□□□ -1.48
CHMP4A-202ENST00000524955 DCAF8L1A6NGE4 600 aa5.78□□□□□ -1.48
CHMP4A-202ENST00000524955 NFKBIEO00221 500 aa5.78□□□□□ -1.48
CHMP4A-202ENST00000524955 RIMBP2O15034 1052 aa5.78□□□□□ -1.48
CHMP4A-202ENST00000524955 ZBTB7BO15156 539 aaPredicted RBP5.78□□□□□ -1.48
CHMP4A-202ENST00000524955 CSF1RP07333 972 aa5.78□□□□□ -1.48
CHMP4A-202ENST00000524955 ALDH1B1P30837 517 aa5.78□□□□□ -1.48
CHMP4A-202ENST00000524955 HOXA10P31260 410 aaPredicted RBP5.78□□□□□ -1.48
CHMP4A-202ENST00000524955 RPS8P62241 208 aaKnown RBP5.78□□□□□ -1.48
CHMP4A-202ENST00000524955 GPSM2P81274 684 aa5.78□□□□□ -1.48
CHMP4A-202ENST00000524955 CCDC152Q4G0S7 254 aa5.78□□□□□ -1.48
CHMP4A-202ENST00000524955 TAF7LQ5H9L4 462 aa5.78□□□□□ -1.48
CHMP4A-202ENST00000524955 ANKRD18AQ8IVF6 992 aa5.78□□□□□ -1.48
CHMP4A-202ENST00000524955 ZNF526Q8TF50 670 aaPredicted RBP5.78□□□□□ -1.48
CHMP4A-202ENST00000524955 C7orf43Q8WVR3 580 aa5.78□□□□□ -1.48
CHMP4A-202ENST00000524955 CRAMP1Q96RY5 1269 aa5.78□□□□□ -1.48
CHMP4A-202ENST00000524955 CRBNQ96SW2 442 aa5.78□□□□□ -1.48
CHMP4A-202ENST00000524955 SIL1Q9H173 461 aa5.78□□□□□ -1.48
CHMP4A-202ENST00000524955 ZNF277Q9NRM2 450 aaPredicted RBP5.78□□□□□ -1.48
CHMP4A-202ENST00000524955 PA2G4Q9UQ80 394 aaKnown RBP5.78□□□□□ -1.48
CHMP4A-202ENST00000524955 UTYO14607 1347 aa5.77□□□□□ -1.49
CHMP4A-202ENST00000524955 DDX60Q8IY21 1712 aaKnown RBP5.77□□□□□ -1.49
CHMP4A-202ENST00000524955 RIC1Q4ADV7 1423 aa5.77□□□□□ -1.49
CHMP4A-202ENST00000524955 PNMA6EA0A0J9YXQ4 647 aa5.77□□□□□ -1.49
CHMP4A-202ENST00000524955 ANKRD18BA2A2Z9 1011 aa5.77□□□□□ -1.49
CHMP4A-202ENST00000524955 TAF5LO75529 589 aa5.77□□□□□ -1.49
CHMP4A-202ENST00000524955 IFIT5Q13325 482 aaKnown RBP5.77□□□□□ -1.49
CHMP4A-202ENST00000524955 MVPQ14764 893 aaKnown RBP5.77□□□□□ -1.49
CHMP4A-202ENST00000524955 AOC3Q16853 763 aa5.77□□□□□ -1.49
CHMP4A-202ENST00000524955 CCDC57Q2TAC2 916 aa5.77□□□□□ -1.49
CHMP4A-202ENST00000524955 LRRC24Q50LG9 513 aa5.77□□□□□ -1.49
CHMP4A-202ENST00000524955 C9orf131Q5VYM1 1079 aa5.77□□□□□ -1.49
CHMP4A-202ENST00000524955 PLA2G12BQ9BX93 195 aa5.77□□□□□ -1.49
CHMP4A-202ENST00000524955 NSFL1CQ9UNZ2 370 aaKnown RBP5.77□□□□□ -1.49
CHMP4A-202ENST00000524955 ATP6V0A2Q9Y487 856 aa5.77□□□□□ -1.49
CHMP4A-202ENST00000524955 KIF13BQ9NQT8 1826 aa5.76□□□□□ -1.49
CHMP4A-202ENST00000524955 C6orf229H3BNL8 230 aa5.76□□□□□ -1.49
CHMP4A-202ENST00000524955 APBB1O00213 710 aa5.76□□□□□ -1.49
CHMP4A-202ENST00000524955 SRGAP3O43295 1099 aa5.76□□□□□ -1.49
CHMP4A-202ENST00000524955 GRIN3BO60391 1043 aa5.76□□□□□ -1.49
CHMP4A-202ENST00000524955 BBOX1O75936 387 aa5.76□□□□□ -1.49
CHMP4A-202ENST00000524955 GNAI2P04899 355 aa5.76□□□□□ -1.49
CHMP4A-202ENST00000524955 GNAI3P08754 354 aa5.76□□□□□ -1.49
CHMP4A-202ENST00000524955 KLRK1P26718 216 aa5.76□□□□□ -1.49
CHMP4A-202ENST00000524955 IGHMBP2P38935 993 aaKnown RBP5.76□□□□□ -1.49
CHMP4A-202ENST00000524955 RFX5P48382 616 aaPredicted RBP5.76□□□□□ -1.49
CHMP4A-202ENST00000524955 DOK7Q18PE1 504 aa5.76□□□□□ -1.49
CHMP4A-202ENST00000524955 CCDC93Q567U6 631 aa5.76□□□□□ -1.49
CHMP4A-202ENST00000524955 DPP8Q6V1X1 898 aaPredicted RBP5.76□□□□□ -1.49
CHMP4A-202ENST00000524955 LDHAL6AQ6ZMR3 332 aa5.76□□□□□ -1.49
CHMP4A-202ENST00000524955 MPNDQ8N594 471 aa5.76□□□□□ -1.49
CHMP4A-202ENST00000524955 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.76□□□□□ -1.49
CHMP4A-202ENST00000524955 EXOC6Q8TAG9 804 aa5.76□□□□□ -1.49
CHMP4A-202ENST00000524955 CDC5LQ99459 802 aaKnown RBP5.76□□□□□ -1.49
CHMP4A-202ENST00000524955 MPHOSPH8Q99549 860 aa5.76□□□□□ -1.49
CHMP4A-202ENST00000524955 CNNM1Q9NRU3 951 aa5.76□□□□□ -1.49
CHMP4A-202ENST00000524955 RNF181Q9P0P0 153 aa5.76□□□□□ -1.49
CHMP4A-202ENST00000524955 ANKIB1Q9P2G1 1089 aa5.76□□□□□ -1.49
CHMP4A-202ENST00000524955 POLLQ9UGP5 575 aa5.76□□□□□ -1.49
CHMP4A-202ENST00000524955 MINPP1Q9UNW1 487 aa5.76□□□□□ -1.49
CHMP4A-202ENST00000524955 PDZRN3Q9UPQ7 1066 aa5.76□□□□□ -1.49
CHMP4A-202ENST00000524955 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.76□□□□□ -1.49
CHMP4A-202ENST00000524955 SLX4Q8IY92 1834 aa5.76□□□□□ -1.49
CHMP4A-202ENST00000524955 LAMB2P55268 1798 aa5.75□□□□□ -1.49
CHMP4A-202ENST00000524955 TAF1P21675 1872 aa5.75□□□□□ -1.49
CHMP4A-202ENST00000524955 UFL1O94874 794 aa5.75□□□□□ -1.49
CHMP4A-202ENST00000524955 HSP90B1P14625 803 aaKnown RBP5.75□□□□□ -1.49
CHMP4A-202ENST00000524955 FKBP4Q02790 459 aaKnown RBP eCLIP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms