RNA–Protein interactions for RNA: ENST00000524334.1

HDAC2-217, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-217ENST00000524334 JDP2Q8WYK2 163 aa16.31■□□□□ 0.2
HDAC2-217ENST00000524334 KIF3CO14782 793 aa16.3■□□□□ 0.2
HDAC2-217ENST00000524334 ALDH1L2Q3SY69 923 aa16.3■□□□□ 0.2
HDAC2-217ENST00000524334 DPP8Q6V1X1 898 aaPredicted RBP16.3■□□□□ 0.2
HDAC2-217ENST00000524334 MPNDQ8N594 471 aa16.3■□□□□ 0.2
HDAC2-217ENST00000524334 JARID2Q92833 1246 aaPredicted RBP16.3■□□□□ 0.2
HDAC2-217ENST00000524334 NMRK2Q9NPI5 230 aa16.3■□□□□ 0.2
HDAC2-217ENST00000524334 SLX4Q8IY92 1834 aa16.3■□□□□ 0.2
HDAC2-217ENST00000524334 F6X3S4 739 aa16.29■□□□□ 0.2
HDAC2-217ENST00000524334 TOMM70O94826 608 aa16.29■□□□□ 0.2
HDAC2-217ENST00000524334 VEGFAP15692 232 aaPredicted RBP16.29■□□□□ 0.2
HDAC2-217ENST00000524334 BEND3Q5T5X7 828 aa16.29■□□□□ 0.2
HDAC2-217ENST00000524334 UBE3BQ7Z3V4 1068 aa16.29■□□□□ 0.2
HDAC2-217ENST00000524334 C16orf71Q8IYS4 520 aaPredicted RBP16.29■□□□□ 0.2
HDAC2-217ENST00000524334 MRPL50Q8N5N7 158 aaKnown RBP16.29■□□□□ 0.2
HDAC2-217ENST00000524334 RTFDC1Q9BY42 306 aaPredicted RBP16.29■□□□□ 0.2
HDAC2-217ENST00000524334 RRAGCQ9HB90 399 aa16.29■□□□□ 0.2
HDAC2-217ENST00000524334 SNED1Q8TER0 1413 aa16.28■□□□□ 0.2
HDAC2-217ENST00000524334 ANKRD36CQ5JPF3 1778 aa16.28■□□□□ 0.2
HDAC2-217ENST00000524334 PTPRCP08575 1304 aa16.28■□□□□ 0.2
HDAC2-217ENST00000524334 CTSWP56202 376 aa16.28■□□□□ 0.2
HDAC2-217ENST00000524334 TTLL11Q8NHH1 800 aa16.28■□□□□ 0.2
HDAC2-217ENST00000524334 SSH1Q8WYL5 1049 aa16.28■□□□□ 0.2
HDAC2-217ENST00000524334 CELF1Q92879 486 aaKnown RBP16.28■□□□□ 0.2
HDAC2-217ENST00000524334 ALDH1L1O75891 902 aa16.27■□□□□ 0.2
HDAC2-217ENST00000524334 HNRNPUQ00839 825 aaKnown RBP eCLIP16.27■□□□□ 0.2
HDAC2-217ENST00000524334 LARGE2Q8N3Y3 721 aa16.27■□□□□ 0.2
HDAC2-217ENST00000524334 PLA2G12BQ9BX93 195 aa16.27■□□□□ 0.2
HDAC2-217ENST00000524334 ARFGEF2Q9Y6D5 1785 aa16.27■□□□□ 0.2
HDAC2-217ENST00000524334 FZD9O00144 591 aa16.26■□□□□ 0.19
HDAC2-217ENST00000524334 SLC4A10Q6U841 1118 aa16.26■□□□□ 0.19
HDAC2-217ENST00000524334 CDC5LQ99459 802 aaKnown RBP16.26■□□□□ 0.19
HDAC2-217ENST00000524334 SRCIN1Q9C0H9 1055 aa16.26■□□□□ 0.19
HDAC2-217ENST00000524334 SEC31BQ9NQW1 1179 aa16.26■□□□□ 0.19
HDAC2-217ENST00000524334 NSFL1CQ9UNZ2 370 aaKnown RBP16.26■□□□□ 0.19
HDAC2-217ENST00000524334 PPIP5K2O43314 1243 aa16.25■□□□□ 0.19
HDAC2-217ENST00000524334 DDNO94850 711 aaPredicted RBP16.25■□□□□ 0.19
HDAC2-217ENST00000524334 CASP7P55210 303 aa16.25■□□□□ 0.19
HDAC2-217ENST00000524334 ANKRD18AQ8IVF6 992 aa16.25■□□□□ 0.19
HDAC2-217ENST00000524334 SMC4Q9NTJ3 1288 aa16.25■□□□□ 0.19
HDAC2-217ENST00000524334 C9orf78Q9NZ63 289 aaPredicted RBP16.25■□□□□ 0.19
HDAC2-217ENST00000524334 RTL9Q8NET4 1388 aa16.25■□□□□ 0.19
HDAC2-217ENST00000524334 GRM8O00222 908 aa16.24■□□□□ 0.19
HDAC2-217ENST00000524334 CSF1RP07333 972 aa16.24■□□□□ 0.19
HDAC2-217ENST00000524334 EIF6P56537 245 aaKnown RBP16.24■□□□□ 0.19
HDAC2-217ENST00000524334 NIM1KQ8IY84 436 aa16.24■□□□□ 0.19
HDAC2-217ENST00000524334 CCDC85AQ96PX6 553 aaPredicted RBP16.24■□□□□ 0.19
HDAC2-217ENST00000524334 FER1L6Q2WGJ9 1857 aa16.23■□□□□ 0.19
HDAC2-217ENST00000524334 IQCA1LA6NCM1 817 aa16.23■□□□□ 0.19
HDAC2-217ENST00000524334 BRPF1P55201 1214 aaPredicted RBP16.23■□□□□ 0.19
HDAC2-217ENST00000524334 KIAA2012Q0VF49 1180 aa16.23■□□□□ 0.19
HDAC2-217ENST00000524334 SLC51AQ86UW1 340 aa16.23■□□□□ 0.19
HDAC2-217ENST00000524334 GPC2Q8N158 579 aa16.23■□□□□ 0.19
HDAC2-217ENST00000524334 RBM46Q8TBY0 533 aaKnown RBP16.23■□□□□ 0.19
HDAC2-217ENST00000524334 L3MBTL3Q96JM7 780 aaPredicted RBP16.23■□□□□ 0.19
HDAC2-217ENST00000524334 GREM2Q9H772 168 aa16.23■□□□□ 0.19
HDAC2-217ENST00000524334 PODXL2Q9NZ53 605 aa16.23■□□□□ 0.19
HDAC2-217ENST00000524334 C6orf229H3BNL8 230 aa16.22■□□□□ 0.19
HDAC2-217ENST00000524334 GPSM2P81274 684 aa16.22■□□□□ 0.19
HDAC2-217ENST00000524334 AOC3Q16853 763 aa16.22■□□□□ 0.19
HDAC2-217ENST00000524334 WASHC4Q2M389 1173 aa16.22■□□□□ 0.19
HDAC2-217ENST00000524334 EYA3Q99504 573 aa16.22■□□□□ 0.19
HDAC2-217ENST00000524334 BCL2L13Q9BXK5 485 aa16.22■□□□□ 0.19
HDAC2-217ENST00000524334 BSDC1Q9NW68 430 aaPredicted RBP16.22■□□□□ 0.19
HDAC2-217ENST00000524334 ANKIB1Q9P2G1 1089 aa16.22■□□□□ 0.19
HDAC2-217ENST00000524334 ZNRF3Q9ULT6 936 aa16.22■□□□□ 0.19
HDAC2-217ENST00000524334 POTECB2RU33 542 aa16.21■□□□□ 0.19
HDAC2-217ENST00000524334 FSTL1Q12841 308 aa16.21■□□□□ 0.19
HDAC2-217ENST00000524334 ZNF541Q9H0D2 1346 aa16.2■□□□□ 0.18
HDAC2-217ENST00000524334 ITGA6P23229 1130 aa16.2■□□□□ 0.18
HDAC2-217ENST00000524334 IGHMBP2P38935 993 aaKnown RBP16.2■□□□□ 0.18
HDAC2-217ENST00000524334 RARSP54136 660 aaKnown RBP16.2■□□□□ 0.18
HDAC2-217ENST00000524334 FOXO4P98177 505 aa16.2■□□□□ 0.18
HDAC2-217ENST00000524334 TBC1D16Q8TBP0 767 aa16.2■□□□□ 0.18
HDAC2-217ENST00000524334 ZC3H12CQ9C0D7 883 aaKnown RBP16.2■□□□□ 0.18
HDAC2-217ENST00000524334 POLLQ9UGP5 575 aa16.2■□□□□ 0.18
HDAC2-217ENST00000524334 SBF1O95248 1867 aa16.19■□□□□ 0.18
HDAC2-217ENST00000524334 ANKRD18BA2A2Z9 1011 aa16.19■□□□□ 0.18
HDAC2-217ENST00000524334 IFIT5Q13325 482 aaKnown RBP16.19■□□□□ 0.18
HDAC2-217ENST00000524334 SMC1BQ8NDV3 1235 aa16.19■□□□□ 0.18
HDAC2-217ENST00000524334 MPHOSPH8Q99549 860 aa16.19■□□□□ 0.18
HDAC2-217ENST00000524334 API5Q9BZZ5 524 aaKnown RBP16.19■□□□□ 0.18
HDAC2-217ENST00000524334 GGA1Q9UJY5 639 aa16.19■□□□□ 0.18
HDAC2-217ENST00000524334 NOB1Q9ULX3 412 aaKnown RBP16.19■□□□□ 0.18
HDAC2-217ENST00000524334 GJA3Q9Y6H8 435 aa16.19■□□□□ 0.18
HDAC2-217ENST00000524334 DDX60Q8IY21 1712 aaKnown RBP16.19■□□□□ 0.18
HDAC2-217ENST00000524334 UTYO14607 1347 aa16.19■□□□□ 0.18
HDAC2-217ENST00000524334 XDHP47989 1333 aa16.19■□□□□ 0.18
HDAC2-217ENST00000524334 ATP2B4P23634 1241 aa16.18■□□□□ 0.18
HDAC2-217ENST00000524334 TNIP1Q15025 636 aa16.18■□□□□ 0.18
HDAC2-217ENST00000524334 LMBR1LQ6UX01 489 aa16.18■□□□□ 0.18
HDAC2-217ENST00000524334 ARHGAP45Q92619 1136 aa16.18■□□□□ 0.18
HDAC2-217ENST00000524334 HACL1Q9UJ83 578 aa16.18■□□□□ 0.18
HDAC2-217ENST00000524334 MINPP1Q9UNW1 487 aa16.18■□□□□ 0.18
HDAC2-217ENST00000524334 IPO8O15397 1037 aaKnown RBP16.17■□□□□ 0.18
HDAC2-217ENST00000524334 UFL1O94874 794 aa16.17■□□□□ 0.18
HDAC2-217ENST00000524334 HSPA6P17066 643 aa16.17■□□□□ 0.18
HDAC2-217ENST00000524334 CCT4P50991 539 aaKnown RBP16.17■□□□□ 0.18
HDAC2-217ENST00000524334 CXCL9Q07325 125 aa16.17■□□□□ 0.18
HDAC2-217ENST00000524334 CCDC57Q2TAC2 916 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms