RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 PANK2Q9BZ23 570 aa9.68□□□□□ -0.86
SPIDR-223ENST00000524033 U2SURPO15042 1029 aaKnown RBP9.67□□□□□ -0.86
SPIDR-223ENST00000524033 ZBTB7BO15156 539 aaPredicted RBP9.67□□□□□ -0.86
SPIDR-223ENST00000524033 RFC4P35249 363 aa9.67□□□□□ -0.86
SPIDR-223ENST00000524033 HIC1Q14526 733 aa9.67□□□□□ -0.86
SPIDR-223ENST00000524033 NFE2L2Q16236 605 aa9.67□□□□□ -0.86
SPIDR-223ENST00000524033 AKAP4Q5JQC9 854 aa9.67□□□□□ -0.86
SPIDR-223ENST00000524033 NLGN1Q8N2Q7 840 aa9.67□□□□□ -0.86
SPIDR-223ENST00000524033 UBE2Q2Q8WVN8 375 aa9.67□□□□□ -0.86
SPIDR-223ENST00000524033 GCC1Q96CN9 775 aa9.67□□□□□ -0.86
SPIDR-223ENST00000524033 PCDHGA10Q9Y5H3 936 aa9.67□□□□□ -0.86
SPIDR-223ENST00000524033 ATP10DQ9P241 1426 aa9.66□□□□□ -0.86
SPIDR-223ENST00000524033 IBTKQ9P2D0 1353 aaPredicted RBP9.66□□□□□ -0.86
SPIDR-223ENST00000524033 SHANK3Q9BYB0 1731 aa9.66□□□□□ -0.86
SPIDR-223ENST00000524033 VAMP4O75379 141 aa9.66□□□□□ -0.86
SPIDR-223ENST00000524033 RPS6KA4O75676 772 aa9.66□□□□□ -0.86
SPIDR-223ENST00000524033 MMP10P09238 476 aa9.66□□□□□ -0.86
SPIDR-223ENST00000524033 HMOX1P09601 288 aa9.66□□□□□ -0.86
SPIDR-223ENST00000524033 PTMSP20962 102 aa9.66□□□□□ -0.86
SPIDR-223ENST00000524033 LGR6Q9HBX8 967 aa9.66□□□□□ -0.86
SPIDR-223ENST00000524033 KDRP35968 1356 aa9.65□□□□□ -0.86
SPIDR-223ENST00000524033 SIRT2Q8IXJ6 389 aa9.65□□□□□ -0.86
SPIDR-223ENST00000524033 TNPO1Q92973 898 aaKnown RBP9.65□□□□□ -0.86
SPIDR-223ENST00000524033 LNPKQ9C0E8 428 aa9.65□□□□□ -0.86
SPIDR-223ENST00000524033 CHMP4BQ9H444 224 aaKnown RBP9.65□□□□□ -0.86
SPIDR-223ENST00000524033 GRPEL1Q9HAV7 217 aa9.65□□□□□ -0.86
SPIDR-223ENST00000524033 IFT57Q9NWB7 429 aa9.65□□□□□ -0.86
SPIDR-223ENST00000524033 LY75O60449 1722 aa9.65□□□□□ -0.87
SPIDR-223ENST00000524033 KAT6BQ8WYB5 2073 aa9.64□□□□□ -0.87
SPIDR-223ENST00000524033 CD2BP2O95400 341 aaKnown RBP9.64□□□□□ -0.87
SPIDR-223ENST00000524033 C1QTNF8P60827 252 aa9.64□□□□□ -0.87
SPIDR-223ENST00000524033 LHX8Q68G74 356 aa9.64□□□□□ -0.87
SPIDR-223ENST00000524033 TBC1D9Q6ZT07 1266 aa9.64□□□□□ -0.87
SPIDR-223ENST00000524033 ZDHHC16Q969W1 377 aa9.64□□□□□ -0.87
SPIDR-223ENST00000524033 SLC52A2Q9HAB3 445 aa9.64□□□□□ -0.87
SPIDR-223ENST00000524033 WWC3Q9ULE0 1092 aa9.64□□□□□ -0.87
SPIDR-223ENST00000524033 AK9Q5TCS8 1911 aa9.64□□□□□ -0.87
SPIDR-223ENST00000524033 KDM6AO15550 1401 aaPredicted RBP9.64□□□□□ -0.87
SPIDR-223ENST00000524033 CNTNAP4Q9C0A0 1308 aa9.63□□□□□ -0.87
SPIDR-223ENST00000524033 PKD1L3Q7Z443 1732 aa9.63□□□□□ -0.87
SPIDR-223ENST00000524033 K7ELQ4 463 aaPredicted RBP9.63□□□□□ -0.87
SPIDR-223ENST00000524033 RNMTO43148 476 aaKnown RBP9.63□□□□□ -0.87
SPIDR-223ENST00000524033 GYS1P13807 737 aa9.63□□□□□ -0.87
SPIDR-223ENST00000524033 PRKAR2BP31323 418 aa9.63□□□□□ -0.87
SPIDR-223ENST00000524033 CRKLP46109 303 aaKnown RBP9.63□□□□□ -0.87
SPIDR-223ENST00000524033 TGFB2P61812 414 aa9.63□□□□□ -0.87
SPIDR-223ENST00000524033 CALD1Q05682 793 aaKnown RBP9.63□□□□□ -0.87
SPIDR-223ENST00000524033 MTHFSDQ2M296 383 aaKnown RBP9.63□□□□□ -0.87
SPIDR-223ENST00000524033 SKOR2Q2VWA4 1001 aaPredicted RBP9.63□□□□□ -0.87
SPIDR-223ENST00000524033 C4BP0C0L5 1744 aa9.62□□□□□ -0.87
SPIDR-223ENST00000524033 ERBB4Q15303 1308 aa9.62□□□□□ -0.87
SPIDR-223ENST00000524033 A0A0G2JLW4 131 aa9.62□□□□□ -0.87
SPIDR-223ENST00000524033 GIGYF1O75420 1035 aaPredicted RBP9.62□□□□□ -0.87
SPIDR-223ENST00000524033 CYP2E1P05181 493 aaPredicted RBP9.62□□□□□ -0.87
SPIDR-223ENST00000524033 FOSBP53539 338 aa9.62□□□□□ -0.87
SPIDR-223ENST00000524033 GNAI1P63096 354 aa9.62□□□□□ -0.87
SPIDR-223ENST00000524033 MAP2K5Q13163 448 aa9.62□□□□□ -0.87
SPIDR-223ENST00000524033 SLC39A6Q13433 755 aa9.62□□□□□ -0.87
SPIDR-223ENST00000524033 TSR1Q2NL82 804 aaKnown RBP9.62□□□□□ -0.87
SPIDR-223ENST00000524033 PPP4R3BQ5MIZ7 849 aa9.62□□□□□ -0.87
SPIDR-223ENST00000524033 GPR153Q6NV75 609 aa9.62□□□□□ -0.87
SPIDR-223ENST00000524033 INTS5Q6P9B9 1019 aaKnown RBP9.62□□□□□ -0.87
SPIDR-223ENST00000524033 GAS2L3Q86XJ1 694 aa9.62□□□□□ -0.87
SPIDR-223ENST00000524033 GBP4Q96PP9 640 aa9.62□□□□□ -0.87
SPIDR-223ENST00000524033 CDHR5Q9HBB8 845 aa9.62□□□□□ -0.87
SPIDR-223ENST00000524033 PARP3Q9Y6F1 533 aa9.62□□□□□ -0.87
SPIDR-223ENST00000524033 GPR37O15354 613 aa9.61□□□□□ -0.87
SPIDR-223ENST00000524033 CDC45O75419 566 aa9.61□□□□□ -0.87
SPIDR-223ENST00000524033 GSPT1P15170 499 aaKnown RBP9.61□□□□□ -0.87
SPIDR-223ENST00000524033 PTGDRQ13258 359 aa9.61□□□□□ -0.87
SPIDR-223ENST00000524033 DNAJC10Q8IXB1 793 aa9.61□□□□□ -0.87
SPIDR-223ENST00000524033 TSPYL6Q8N831 410 aa9.61□□□□□ -0.87
SPIDR-223ENST00000524033 GAS2L2Q8NHY3 880 aa9.61□□□□□ -0.87
SPIDR-223ENST00000524033 PPP1R9BQ96SB3 815 aa9.61□□□□□ -0.87
SPIDR-223ENST00000524033 API5Q9BZZ5 524 aaKnown RBP9.61□□□□□ -0.87
SPIDR-223ENST00000524033 CCDC87Q9NVE4 849 aa9.61□□□□□ -0.87
SPIDR-223ENST00000524033 LHX6Q9UPM6 363 aa9.61□□□□□ -0.87
SPIDR-223ENST00000524033 QSER1Q2KHR3 1735 aa9.61□□□□□ -0.87
SPIDR-223ENST00000524033 TOGARAM1Q9Y4F4 1720 aa9.61□□□□□ -0.87
SPIDR-223ENST00000524033 EIF5BO60841 1220 aaKnown RBP9.6□□□□□ -0.87
SPIDR-223ENST00000524033 ZPR1O75312 459 aa9.6□□□□□ -0.87
SPIDR-223ENST00000524033 CYP19A1P11511 503 aaPredicted RBP9.6□□□□□ -0.87
SPIDR-223ENST00000524033 OTUD5Q96G74 571 aa9.6□□□□□ -0.87
SPIDR-223ENST00000524033 PHACTR3Q96KR7 559 aa9.6□□□□□ -0.87
SPIDR-223ENST00000524033 GZF1Q9H116 711 aaPredicted RBP9.6□□□□□ -0.87
SPIDR-223ENST00000524033 MBIPQ9NS73 344 aa9.6□□□□□ -0.87
SPIDR-223ENST00000524033 SRP68Q9UHB9 627 aaKnown RBP9.6□□□□□ -0.87
SPIDR-223ENST00000524033 CACNA1FO60840 1977 aa9.6□□□□□ -0.87
SPIDR-223ENST00000524033 C5P01031 1676 aa9.6□□□□□ -0.87
SPIDR-223ENST00000524033 GNAT3A8MTJ3 354 aa9.59□□□□□ -0.87
SPIDR-223ENST00000524033 ESPNB1AK53 854 aa9.59□□□□□ -0.87
SPIDR-223ENST00000524033 DPEP1P16444 411 aa9.59□□□□□ -0.87
SPIDR-223ENST00000524033 LMOD3Q0VAK6 560 aa9.59□□□□□ -0.87
SPIDR-223ENST00000524033 RABEP1Q15276 862 aa9.59□□□□□ -0.87
SPIDR-223ENST00000524033 TTC22Q5TAA0 569 aa9.59□□□□□ -0.87
SPIDR-223ENST00000524033 ANKRD45Q5TZF3 282 aa9.59□□□□□ -0.87
SPIDR-223ENST00000524033 INTS3Q68E01 1043 aaKnown RBP9.59□□□□□ -0.87
SPIDR-223ENST00000524033 PLEKHM2Q8IWE5 1019 aa9.59□□□□□ -0.87
SPIDR-223ENST00000524033 CCDC102AQ96A19 550 aa9.59□□□□□ -0.87
SPIDR-223ENST00000524033 DCTPP1Q9H773 170 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms