RNA–Protein interactions for RNA: ENST00000523777.5

TRAPPC9-214, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-214ENST00000523777 GRAPLQ8TC17 118 aaPredicted RBP20.42■□□□□ 0.86
TRAPPC9-214ENST00000523777 C7orf43Q8WVR3 580 aa20.42■□□□□ 0.86
TRAPPC9-214ENST00000523777 PPEF1O14829 653 aaPredicted RBP20.41■□□□□ 0.86
TRAPPC9-214ENST00000523777 CTSWP56202 376 aa20.41■□□□□ 0.86
TRAPPC9-214ENST00000523777 HDAC5Q9UQL6 1122 aa20.41■□□□□ 0.86
TRAPPC9-214ENST00000523777 ABCC4O15439 1325 aa20.41■□□□□ 0.86
TRAPPC9-214ENST00000523777 CASP7P55210 303 aa20.4■□□□□ 0.86
TRAPPC9-214ENST00000523777 FER1L6Q2WGJ9 1857 aa20.4■□□□□ 0.86
TRAPPC9-214ENST00000523777 LTBP3Q9NS15 1303 aa20.4■□□□□ 0.86
TRAPPC9-214ENST00000523777 UTRNP46939 3433 aa20.39■□□□□ 0.86
TRAPPC9-214ENST00000523777 RTL9Q8NET4 1388 aa20.39■□□□□ 0.85
TRAPPC9-214ENST00000523777 BCAR3O75815 825 aa20.39■□□□□ 0.85
TRAPPC9-214ENST00000523777 YY1P25490 414 aa20.39■□□□□ 0.85
TRAPPC9-214ENST00000523777 ZKSCAN2Q63HK3 967 aa20.39■□□□□ 0.85
TRAPPC9-214ENST00000523777 ATF7IPQ6VMQ6 1270 aa20.39■□□□□ 0.85
TRAPPC9-214ENST00000523777 JARID2Q92833 1246 aaPredicted RBP20.39■□□□□ 0.85
TRAPPC9-214ENST00000523777 ZNF219Q9P2Y4 722 aaPredicted RBP20.39■□□□□ 0.85
TRAPPC9-214ENST00000523777 ATP6V0A2Q9Y487 856 aa20.39■□□□□ 0.85
TRAPPC9-214ENST00000523777 UTYO14607 1347 aa20.38■□□□□ 0.85
TRAPPC9-214ENST00000523777 SP8Q8IXZ3 490 aa20.38■□□□□ 0.85
TRAPPC9-214ENST00000523777 TTLL11Q8NHH1 800 aa20.38■□□□□ 0.85
TRAPPC9-214ENST00000523777 FRAT1Q92837 279 aaPredicted RBP20.38■□□□□ 0.85
TRAPPC9-214ENST00000523777 CDC5LQ99459 802 aaKnown RBP20.38■□□□□ 0.85
TRAPPC9-214ENST00000523777 TAOK3Q9H2K8 898 aa20.38■□□□□ 0.85
TRAPPC9-214ENST00000523777 LMNB1P20700 586 aa20.37■□□□□ 0.85
TRAPPC9-214ENST00000523777 RPS8P62241 208 aaKnown RBP20.37■□□□□ 0.85
TRAPPC9-214ENST00000523777 SBF1O95248 1867 aa20.37■□□□□ 0.85
TRAPPC9-214ENST00000523777 CSF1RP07333 972 aa20.36■□□□□ 0.85
TRAPPC9-214ENST00000523777 FKBP4Q02790 459 aaKnown RBP eCLIP20.36■□□□□ 0.85
TRAPPC9-214ENST00000523777 ZC3H4Q9UPT8 1303 aaKnown RBP20.35■□□□□ 0.85
TRAPPC9-214ENST00000523777 NFKBIEO00221 500 aa20.35■□□□□ 0.85
TRAPPC9-214ENST00000523777 MS4A1P11836 297 aa20.35■□□□□ 0.85
TRAPPC9-214ENST00000523777 INTS3Q68E01 1043 aaKnown RBP20.35■□□□□ 0.85
TRAPPC9-214ENST00000523777 ANKRD18AQ8IVF6 992 aa20.35■□□□□ 0.85
TRAPPC9-214ENST00000523777 PSMD1Q99460 953 aa20.35■□□□□ 0.85
TRAPPC9-214ENST00000523777 TRIM27P14373 513 aa20.34■□□□□ 0.85
TRAPPC9-214ENST00000523777 SUPT20HQ8NEM7 779 aa20.34■□□□□ 0.85
TRAPPC9-214ENST00000523777 YTHDC1Q96MU7 727 aaKnown RBP20.34■□□□□ 0.85
TRAPPC9-214ENST00000523777 VPS33BQ9H267 617 aa20.34■□□□□ 0.85
TRAPPC9-214ENST00000523777 RCAN3Q9UKA8 241 aa20.34■□□□□ 0.85
TRAPPC9-214ENST00000523777 CCDC88AQ3V6T2 1871 aa20.33■□□□□ 0.85
TRAPPC9-214ENST00000523777 C9orf131Q5VYM1 1079 aa20.33■□□□□ 0.85
TRAPPC9-214ENST00000523777 CELF1Q92879 486 aaKnown RBP20.33■□□□□ 0.85
TRAPPC9-214ENST00000523777 USP44Q9H0E7 712 aa20.33■□□□□ 0.85
TRAPPC9-214ENST00000523777 RNF181Q9P0P0 153 aa20.33■□□□□ 0.85
TRAPPC9-214ENST00000523777 TAF1P21675 1872 aa20.33■□□□□ 0.84
TRAPPC9-214ENST00000523777 NBPF7P0C2Y1 421 aaPredicted RBP20.32■□□□□ 0.84
TRAPPC9-214ENST00000523777 IGHMBP2P38935 993 aaKnown RBP20.32■□□□□ 0.84
TRAPPC9-214ENST00000523777 FOXO4P98177 505 aa20.32■□□□□ 0.84
TRAPPC9-214ENST00000523777 RASSF7Q02833 373 aa20.32■□□□□ 0.84
TRAPPC9-214ENST00000523777 FTSJ3Q8IY81 847 aaKnown RBP20.32■□□□□ 0.84
TRAPPC9-214ENST00000523777 GREM2Q9H772 168 aa20.32■□□□□ 0.84
TRAPPC9-214ENST00000523777 SEC31BQ9NQW1 1179 aa20.32■□□□□ 0.84
TRAPPC9-214ENST00000523777 DICER1Q9UPY3 1922 aaKnown RBP20.31■□□□□ 0.84
TRAPPC9-214ENST00000523777 ANKRD18BA2A2Z9 1011 aa20.31■□□□□ 0.84
TRAPPC9-214ENST00000523777 UBTFL1P0CB47 393 aaPredicted RBP20.31■□□□□ 0.84
TRAPPC9-214ENST00000523777 ITGA6P23229 1130 aa20.31■□□□□ 0.84
TRAPPC9-214ENST00000523777 IFIT5Q13325 482 aaKnown RBP20.31■□□□□ 0.84
TRAPPC9-214ENST00000523777 CCDC57Q2TAC2 916 aa20.31■□□□□ 0.84
TRAPPC9-214ENST00000523777 DPP8Q6V1X1 898 aaPredicted RBP20.31■□□□□ 0.84
TRAPPC9-214ENST00000523777 MPNDQ8N594 471 aa20.31■□□□□ 0.84
TRAPPC9-214ENST00000523777 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.31■□□□□ 0.84
TRAPPC9-214ENST00000523777 CCDC85AQ96PX6 553 aaPredicted RBP20.31■□□□□ 0.84
TRAPPC9-214ENST00000523777 LRRC37AA6NMS7 1700 aa20.3■□□□□ 0.84
TRAPPC9-214ENST00000523777 GNAI3P08754 354 aa20.3■□□□□ 0.84
TRAPPC9-214ENST00000523777 LMBR1LQ6UX01 489 aa20.3■□□□□ 0.84
TRAPPC9-214ENST00000523777 DZIP1LQ8IYY4 767 aaKnown RBP20.3■□□□□ 0.84
TRAPPC9-214ENST00000523777 BSDC1Q9NW68 430 aaPredicted RBP20.3■□□□□ 0.84
TRAPPC9-214ENST00000523777 CHMP3Q9Y3E7 222 aa20.3■□□□□ 0.84
TRAPPC9-214ENST00000523777 SNED1Q8TER0 1413 aa20.29■□□□□ 0.84
TRAPPC9-214ENST00000523777 SUCLG2Q96I99 432 aa20.29■□□□□ 0.84
TRAPPC9-214ENST00000523777 MPHOSPH8Q99549 860 aa20.29■□□□□ 0.84
TRAPPC9-214ENST00000523777 RTFDC1Q9BY42 306 aaPredicted RBP20.29■□□□□ 0.84
TRAPPC9-214ENST00000523777 IARSP41252 1262 aaKnown RBP20.28■□□□□ 0.84
TRAPPC9-214ENST00000523777 FAM161AQ3B820 660 aa20.28■□□□□ 0.84
TRAPPC9-214ENST00000523777 RABL6Q3YEC7 729 aaPredicted RBP20.28■□□□□ 0.84
TRAPPC9-214ENST00000523777 OLFM4Q6UX06 510 aa20.28■□□□□ 0.84
TRAPPC9-214ENST00000523777 CLUAP1Q96AJ1 413 aa20.28■□□□□ 0.84
TRAPPC9-214ENST00000523777 TAF7LQ5H9L4 462 aa20.27■□□□□ 0.84
TRAPPC9-214ENST00000523777 BICC1Q9H694 974 aaKnown RBP20.27■□□□□ 0.84
TRAPPC9-214ENST00000523777 PODXL2Q9NZ53 605 aa20.27■□□□□ 0.84
TRAPPC9-214ENST00000523777 NSFL1CQ9UNZ2 370 aaKnown RBP20.27■□□□□ 0.84
TRAPPC9-214ENST00000523777 EPHA10Q5JZY3 1008 aa20.26■□□□□ 0.83
TRAPPC9-214ENST00000523777 JDP2Q8WYK2 163 aa20.26■□□□□ 0.83
TRAPPC9-214ENST00000523777 EYA3Q99504 573 aa20.26■□□□□ 0.83
TRAPPC9-214ENST00000523777 ZNF277Q9NRM2 450 aaPredicted RBP20.26■□□□□ 0.83
TRAPPC9-214ENST00000523777 ANKIB1Q9P2G1 1089 aa20.26■□□□□ 0.83
TRAPPC9-214ENST00000523777 DPY19L2Q6NUT2 758 aa20.25■□□□□ 0.83
TRAPPC9-214ENST00000523777 KAZALD1Q96I82 304 aa20.25■□□□□ 0.83
TRAPPC9-214ENST00000523777 ANKRD2Q9GZV1 360 aa20.25■□□□□ 0.83
TRAPPC9-214ENST00000523777 XDHP47989 1333 aa20.25■□□□□ 0.83
TRAPPC9-214ENST00000523777 TMEM57Q8N5G2 664 aa20.24■□□□□ 0.83
TRAPPC9-214ENST00000523777 CHMP4BQ9H444 224 aaKnown RBP20.24■□□□□ 0.83
TRAPPC9-214ENST00000523777 ATP2B4P23634 1241 aa20.23■□□□□ 0.83
TRAPPC9-214ENST00000523777 PRELPP51888 382 aa20.23■□□□□ 0.83
TRAPPC9-214ENST00000523777 TIAM2Q8IVF5 1701 aa20.23■□□□□ 0.83
TRAPPC9-214ENST00000523777 LARGE2Q8N3Y3 721 aa20.23■□□□□ 0.83
TRAPPC9-214ENST00000523777 MEIS3Q99687 375 aa20.23■□□□□ 0.83
TRAPPC9-214ENST00000523777 GGA1Q9UJY5 639 aa20.23■□□□□ 0.83
TRAPPC9-214ENST00000523777 MINPP1Q9UNW1 487 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms