RNA–Protein interactions for RNA: ENST00000523765.1

LAMA4-220, Transcript of laminin subunit alpha 4, humanhuman

TSL 5

Gene LAMA4, Length 1,054 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-220ENST00000523765 TIMELESSQ9UNS1 1208 aa13.07□□□□□ -0.32
LAMA4-220ENST00000523765 UBN2Q6ZU65 1347 aa13.07□□□□□ -0.32
LAMA4-220ENST00000523765 RAD17O75943 681 aa13.06□□□□□ -0.32
LAMA4-220ENST00000523765 EGFRP00533 1210 aa13.06□□□□□ -0.32
LAMA4-220ENST00000523765 GTF2E1P29083 439 aaPredicted RBP13.06□□□□□ -0.32
LAMA4-220ENST00000523765 CC2D2BQ6DHV5 1058 aa13.06□□□□□ -0.32
LAMA4-220ENST00000523765 PHACTR3Q96KR7 559 aa13.06□□□□□ -0.32
LAMA4-220ENST00000523765 HSPA5P11021 654 aaKnown RBP13.05□□□□□ -0.32
LAMA4-220ENST00000523765 RPGRQ92834 1020 aaKnown RBP13.05□□□□□ -0.32
LAMA4-220ENST00000523765 HPS5Q9UPZ3 1129 aa13.05□□□□□ -0.32
LAMA4-220ENST00000523765 SZT2Q5T011 3432 aa13.05□□□□□ -0.32
LAMA4-220ENST00000523765 DUOX1Q9NRD9 1551 aa13.04□□□□□ -0.32
LAMA4-220ENST00000523765 YDJCA8MPS7 323 aa13.04□□□□□ -0.32
LAMA4-220ENST00000523765 ADM5C9JUS6 153 aa13.04□□□□□ -0.32
LAMA4-220ENST00000523765 GPTP24298 496 aa13.04□□□□□ -0.32
LAMA4-220ENST00000523765 RGMBQ6NW40 437 aa13.04□□□□□ -0.32
LAMA4-220ENST00000523765 TTLL7Q6ZT98 887 aa13.04□□□□□ -0.32
LAMA4-220ENST00000523765 CDC37L1Q7L3B6 337 aa13.04□□□□□ -0.32
LAMA4-220ENST00000523765 NGEFQ8N5V2 710 aa13.04□□□□□ -0.32
LAMA4-220ENST00000523765 SAGE1Q9NXZ1 904 aa13.04□□□□□ -0.32
LAMA4-220ENST00000523765 ZNRF3Q9ULT6 936 aa13.04□□□□□ -0.32
LAMA4-220ENST00000523765 KNSTRNQ9Y448 316 aa13.04□□□□□ -0.32
LAMA4-220ENST00000523765 KIF7Q2M1P5 1343 aa13.04□□□□□ -0.32
LAMA4-220ENST00000523765 ZNF316A6NFI3 1004 aaPredicted RBP13.03□□□□□ -0.32
LAMA4-220ENST00000523765 U2SURPO15042 1029 aaKnown RBP13.03□□□□□ -0.32
LAMA4-220ENST00000523765 SNRPA1P09661 255 aaKnown RBP13.03□□□□□ -0.32
LAMA4-220ENST00000523765 SUSD4Q5VX71 490 aa13.03□□□□□ -0.32
LAMA4-220ENST00000523765 SAMD7Q7Z3H4 446 aa13.03□□□□□ -0.32
LAMA4-220ENST00000523765 CTU1Q7Z7A3 348 aaKnown RBP13.03□□□□□ -0.32
LAMA4-220ENST00000523765 GAS2L2Q8NHY3 880 aa13.03□□□□□ -0.32
LAMA4-220ENST00000523765 CRAMP1Q96RY5 1269 aa13.03□□□□□ -0.32
LAMA4-220ENST00000523765 CSRNP1Q96S65 589 aa13.03□□□□□ -0.32
LAMA4-220ENST00000523765 DCTN1Q14203 1278 aa13.02□□□□□ -0.33
LAMA4-220ENST00000523765 HABP4Q5JVS0 413 aaKnown RBP13.02□□□□□ -0.33
LAMA4-220ENST00000523765 MCM10Q7L590 875 aa13.02□□□□□ -0.33
LAMA4-220ENST00000523765 ZC3H15Q8WU90 426 aaKnown RBP13.02□□□□□ -0.33
LAMA4-220ENST00000523765 BCL2L13Q9BXK5 485 aa13.02□□□□□ -0.33
LAMA4-220ENST00000523765 CNOT7Q9UIV1 285 aaKnown RBP13.02□□□□□ -0.33
LAMA4-220ENST00000523765 COL4A1P02462 1669 aa13.02□□□□□ -0.33
LAMA4-220ENST00000523765 NTSR2O95665 410 aa13.01□□□□□ -0.33
LAMA4-220ENST00000523765 ZNF157P51786 506 aaPredicted RBP13.01□□□□□ -0.33
LAMA4-220ENST00000523765 MICALL2Q8IY33 904 aa13.01□□□□□ -0.33
LAMA4-220ENST00000523765 RBM17Q96I25 401 aaKnown RBP13.01□□□□□ -0.33
LAMA4-220ENST00000523765 RTFDC1Q9BY42 306 aaPredicted RBP13.01□□□□□ -0.33
LAMA4-220ENST00000523765 GBA2Q9HCG7 927 aaPredicted RBP13.01□□□□□ -0.33
LAMA4-220ENST00000523765 MIS18AQ9NYP9 233 aa13.01□□□□□ -0.33
LAMA4-220ENST00000523765 ATP6V0A2Q9Y487 856 aa13.01□□□□□ -0.33
LAMA4-220ENST00000523765 ABCC4O15439 1325 aa13□□□□□ -0.33
LAMA4-220ENST00000523765 ASTN2O75129 1339 aaPredicted RBP13□□□□□ -0.33
LAMA4-220ENST00000523765 RGL2O15211 777 aa13□□□□□ -0.33
LAMA4-220ENST00000523765 SLC10A3P09131 477 aa13□□□□□ -0.33
LAMA4-220ENST00000523765 TBC1D10BQ4KMP7 808 aaPredicted RBP13□□□□□ -0.33
LAMA4-220ENST00000523765 CC2D1BQ5T0F9 858 aaKnown RBP13□□□□□ -0.33
LAMA4-220ENST00000523765 NYXQ9GZU5 481 aa13□□□□□ -0.33
LAMA4-220ENST00000523765 KDM3BQ7LBC6 1761 aa12.99□□□□□ -0.33
LAMA4-220ENST00000523765 CDHR2Q9BYE9 1310 aa12.99□□□□□ -0.33
LAMA4-220ENST00000523765 GRIPAP1Q4V328 841 aa12.99□□□□□ -0.33
LAMA4-220ENST00000523765 KRT26Q7Z3Y9 468 aa12.99□□□□□ -0.33
LAMA4-220ENST00000523765 ZBTB3Q9H5J0 574 aa12.99□□□□□ -0.33
LAMA4-220ENST00000523765 KCNQ5Q9NR82 932 aa12.99□□□□□ -0.33
LAMA4-220ENST00000523765 FARP1Q9Y4F1 1045 aaPredicted RBP12.99□□□□□ -0.33
LAMA4-220ENST00000523765 ANKRD36CQ5JPF3 1778 aa12.99□□□□□ -0.33
LAMA4-220ENST00000523765 LRRC37AA6NMS7 1700 aa12.99□□□□□ -0.33
LAMA4-220ENST00000523765 IBTKQ9P2D0 1353 aaPredicted RBP12.98□□□□□ -0.33
LAMA4-220ENST00000523765 MAP3K15Q6ZN16 1313 aa12.98□□□□□ -0.33
LAMA4-220ENST00000523765 PRKAR2BP31323 418 aa12.98□□□□□ -0.33
LAMA4-220ENST00000523765 KIAA2012Q0VF49 1180 aa12.98□□□□□ -0.33
LAMA4-220ENST00000523765 CNGB1Q14028 1251 aaPredicted RBP12.98□□□□□ -0.33
LAMA4-220ENST00000523765 ZNF34Q8IZ26 560 aa12.98□□□□□ -0.33
LAMA4-220ENST00000523765 CCDC102AQ96A19 550 aa12.98□□□□□ -0.33
LAMA4-220ENST00000523765 RSPH6AQ9H0K4 717 aa12.98□□□□□ -0.33
LAMA4-220ENST00000523765 ERVV-1B6SEH8 477 aa12.97□□□□□ -0.33
LAMA4-220ENST00000523765 PSMD14O00487 310 aa12.97□□□□□ -0.33
LAMA4-220ENST00000523765 TBC1D8O95759 1140 aa12.97□□□□□ -0.33
LAMA4-220ENST00000523765 RBM26Q5T8P6 1007 aaKnown RBP12.97□□□□□ -0.33
LAMA4-220ENST00000523765 DPP8Q6V1X1 898 aaPredicted RBP12.97□□□□□ -0.33
LAMA4-220ENST00000523765 RASAL3Q86YV0 1011 aa12.97□□□□□ -0.33
LAMA4-220ENST00000523765 C2orf69Q8N8R5 385 aa12.97□□□□□ -0.33
LAMA4-220ENST00000523765 ZNF296Q8WUU4 475 aaPredicted RBP12.97□□□□□ -0.33
LAMA4-220ENST00000523765 VPS33BQ9H267 617 aa12.97□□□□□ -0.33
LAMA4-220ENST00000523765 RRP7AQ9Y3A4 280 aaKnown RBP12.97□□□□□ -0.33
LAMA4-220ENST00000523765 SCN9AQ15858 1988 aa12.97□□□□□ -0.33
LAMA4-220ENST00000523765 PAPPA2Q9BXP8 1791 aa12.97□□□□□ -0.33
LAMA4-220ENST00000523765 PER1O15534 1290 aaPredicted RBP12.96□□□□□ -0.33
LAMA4-220ENST00000523765 MYL6BP14649 208 aa12.96□□□□□ -0.33
LAMA4-220ENST00000523765 EIF4G2P78344 907 aaKnown RBP eCLIP12.96□□□□□ -0.33
LAMA4-220ENST00000523765 TNIP1Q15025 636 aa12.96□□□□□ -0.33
LAMA4-220ENST00000523765 MPNDQ8N594 471 aa12.96□□□□□ -0.33
LAMA4-220ENST00000523765 DLG5Q8TDM6 1919 aa12.96□□□□□ -0.34
LAMA4-220ENST00000523765 H7C1D1 291 aa12.95□□□□□ -0.34
LAMA4-220ENST00000523765 FXR1P51114 621 aaKnown RBP eCLIP12.95□□□□□ -0.34
LAMA4-220ENST00000523765 MOB2Q70IA6 237 aa12.95□□□□□ -0.34
LAMA4-220ENST00000523765 ZNF428Q96B54 188 aa12.95□□□□□ -0.34
LAMA4-220ENST00000523765 R3HDMLQ9H3Y0 253 aa12.95□□□□□ -0.34
LAMA4-220ENST00000523765 DBNDD1Q9H9R9 158 aa12.95□□□□□ -0.34
LAMA4-220ENST00000523765 SCAF8Q9UPN6 1271 aaKnown RBP12.95□□□□□ -0.34
LAMA4-220ENST00000523765 RTL9Q8NET4 1388 aa12.94□□□□□ -0.34
LAMA4-220ENST00000523765 SP8Q8IXZ3 490 aa12.94□□□□□ -0.34
LAMA4-220ENST00000523765 SUPT20HQ8NEM7 779 aa12.94□□□□□ -0.34
LAMA4-220ENST00000523765 FBXO3Q9UK99 471 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms