RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-223	ENST00000523636	S1PR4	O95977	384 aa		7.6	□□□□□ -1.19
PABPC1-223	ENST00000523636	CTH	P32929	405 aa		7.6	□□□□□ -1.19
PABPC1-223	ENST00000523636	VEGFB	P49765	207 aa		7.6	□□□□□ -1.19
PABPC1-223	ENST00000523636	KANK4	Q5T7N3	995 aa	Predicted RBP	7.6	□□□□□ -1.19
PABPC1-223	ENST00000523636	C9orf131	Q5VYM1	1079 aa		7.6	□□□□□ -1.19
PABPC1-223	ENST00000523636	TFCP2L1	Q9NZI6	479 aa		7.6	□□□□□ -1.19
PABPC1-223	ENST00000523636	RGPD5	Q99666	1765 aa		7.6	□□□□□ -1.19
PABPC1-223	ENST00000523636	PLEKHG2	Q9H7P9	1386 aa		7.59	□□□□□ -1.19
PABPC1-223	ENST00000523636	GGCX	P38435	758 aa		7.59	□□□□□ -1.19
PABPC1-223	ENST00000523636	HABP4	Q5JVS0	413 aa	Known RBP	7.59	□□□□□ -1.19
PABPC1-223	ENST00000523636	NUTM2G	Q5VZR2	741 aa		7.59	□□□□□ -1.19
PABPC1-223	ENST00000523636	TMEM132E	Q6IEE7	984 aa		7.59	□□□□□ -1.19
PABPC1-223	ENST00000523636	SMIM5	Q71RC9	77 aa		7.59	□□□□□ -1.19
PABPC1-223	ENST00000523636	PLA2G2E	Q9NZK7	142 aa		7.59	□□□□□ -1.19
PABPC1-223	ENST00000523636	GPSM3	Q9Y4H4	160 aa		7.59	□□□□□ -1.19
PABPC1-223	ENST00000523636	VPS8	Q8N3P4	1428 aa		7.59	□□□□□ -1.19
PABPC1-223	ENST00000523636	LTBP1	Q14766	1721 aa		7.58	□□□□□ -1.2
PABPC1-223	ENST00000523636	ZBTB7C	A1YPR0	619 aa		7.58	□□□□□ -1.2
PABPC1-223	ENST00000523636	POTEC	B2RU33	542 aa		7.58	□□□□□ -1.2
PABPC1-223	ENST00000523636	AIDA	Q96BJ3	306 aa		7.58	□□□□□ -1.2
PABPC1-223	ENST00000523636	HIRIP3	Q9BW71	556 aa	Predicted RBP	7.58	□□□□□ -1.2
PABPC1-223	ENST00000523636	MCOLN1	Q9GZU1	580 aa		7.58	□□□□□ -1.2
PABPC1-223	ENST00000523636	THSD7B	Q9C0I4	1608 aa		7.58	□□□□□ -1.2
PABPC1-223	ENST00000523636	GPRASP1	Q5JY77	1395 aa		7.58	□□□□□ -1.2
PABPC1-223	ENST00000523636	TRIOBP	Q9H2D6	2365 aa		7.57	□□□□□ -1.2
PABPC1-223	ENST00000523636	SOX11	P35716	441 aa		7.57	□□□□□ -1.2
PABPC1-223	ENST00000523636	FXR1	P51114	621 aa	Known RBP eCLIP	7.57	□□□□□ -1.2
PABPC1-223	ENST00000523636	PDXDC2P	Q6P474	469 aa		7.57	□□□□□ -1.2
PABPC1-223	ENST00000523636	AMIGO3	Q86WK7	504 aa		7.57	□□□□□ -1.2
PABPC1-223	ENST00000523636	CCDC24	Q8N4L8	307 aa		7.57	□□□□□ -1.2
PABPC1-223	ENST00000523636	ANKLE1	Q8NAG6	615 aa		7.57	□□□□□ -1.2
PABPC1-223	ENST00000523636	UNC93B1	Q9H1C4	597 aa		7.57	□□□□□ -1.2
PABPC1-223	ENST00000523636	C1orf115	Q9H7X2	142 aa		7.57	□□□□□ -1.2
PABPC1-223	ENST00000523636	FCF1	Q9Y324	198 aa	Known RBP	7.57	□□□□□ -1.2
PABPC1-223	ENST00000523636	HTT	P42858	3142 aa		7.57	□□□□□ -1.2
PABPC1-223	ENST00000523636	ABCC6	O95255	1503 aa		7.57	□□□□□ -1.2
PABPC1-223	ENST00000523636	ADGRF5	Q8IZF2	1346 aa		7.56	□□□□□ -1.2
PABPC1-223	ENST00000523636	KDM2B	Q8NHM5	1336 aa		7.56	□□□□□ -1.2
PABPC1-223	ENST00000523636	SPATA31E1	Q6ZUB1	1445 aa		7.56	□□□□□ -1.2
PABPC1-223	ENST00000523636	YTHDC2	Q9H6S0	1430 aa	Known RBP	7.56	□□□□□ -1.2
PABPC1-223	ENST00000523636	SLC27A3	Q5K4L6	730 aa		7.56	□□□□□ -1.2
PABPC1-223	ENST00000523636	ARID3A	Q99856	593 aa		7.56	□□□□□ -1.2
PABPC1-223	ENST00000523636	CHMP4A	Q9BY43	222 aa		7.56	□□□□□ -1.2
PABPC1-223	ENST00000523636	TAF1L	Q8IZX4	1826 aa		7.56	□□□□□ -1.2
PABPC1-223	ENST00000523636	MEGF6	O75095	1541 aa		7.56	□□□□□ -1.2
PABPC1-223	ENST00000523636	ZBBX	A8MT70	800 aa		7.55	□□□□□ -1.2
PABPC1-223	ENST00000523636	NR1H3	Q13133	447 aa		7.55	□□□□□ -1.2
PABPC1-223	ENST00000523636	PTCRA	Q6ISU1	281 aa	Predicted RBP	7.55	□□□□□ -1.2
PABPC1-223	ENST00000523636	ARHGAP27	Q6ZUM4	889 aa		7.55	□□□□□ -1.2
PABPC1-223	ENST00000523636	ANKRD30B	Q9BXX2	1392 aa		7.55	□□□□□ -1.2
PABPC1-223	ENST00000523636	CEP290	O15078	2479 aa		7.54	□□□□□ -1.2
PABPC1-223	ENST00000523636	CCDC88A	Q3V6T2	1871 aa		7.54	□□□□□ -1.2
PABPC1-223	ENST00000523636	RNF223	E7ERA6	249 aa		7.54	□□□□□ -1.2
PABPC1-223	ENST00000523636	HMGB1	P09429	215 aa	Known RBP	7.54	□□□□□ -1.2
PABPC1-223	ENST00000523636	SOX10	P56693	466 aa		7.54	□□□□□ -1.2
PABPC1-223	ENST00000523636	PTK2	Q05397	1052 aa		7.54	□□□□□ -1.2
PABPC1-223	ENST00000523636	ZNF592	Q92610	1267 aa		7.54	□□□□□ -1.2
PABPC1-223	ENST00000523636	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	7.54	□□□□□ -1.2
PABPC1-223	ENST00000523636	BCS1L	Q9Y276	419 aa		7.54	□□□□□ -1.2
PABPC1-223	ENST00000523636	NSD2	O96028	1365 aa		7.54	□□□□□ -1.2
PABPC1-223	ENST00000523636	EYS	Q5T1H1	3165 aa		7.54	□□□□□ -1.2
PABPC1-223	ENST00000523636	C5	P01031	1676 aa		7.54	□□□□□ -1.2
PABPC1-223	ENST00000523636	UBR3	Q6ZT12	1888 aa		7.53	□□□□□ -1.2
PABPC1-223	ENST00000523636	ITSN1	Q15811	1721 aa		7.53	□□□□□ -1.2
PABPC1-223	ENST00000523636	POM121C	A8CG34	1229 aa		7.53	□□□□□ -1.2
PABPC1-223	ENST00000523636	HSP90B1	P14625	803 aa	Known RBP	7.53	□□□□□ -1.2
PABPC1-223	ENST00000523636	MCCD1	P59942	119 aa	Predicted RBP	7.53	□□□□□ -1.2
PABPC1-223	ENST00000523636	EIF4G2	P78344	907 aa	Known RBP eCLIP	7.53	□□□□□ -1.2
PABPC1-223	ENST00000523636	VAC14	Q08AM6	782 aa		7.53	□□□□□ -1.2
PABPC1-223	ENST00000523636	GLMN	Q92990	594 aa		7.53	□□□□□ -1.2
PABPC1-223	ENST00000523636	SERPINA10	Q9UK55	444 aa		7.53	□□□□□ -1.2
PABPC1-223	ENST00000523636	PASK	Q96RG2	1323 aa		7.52	□□□□□ -1.2
PABPC1-223	ENST00000523636	NUP155	O75694	1391 aa		7.52	□□□□□ -1.21
PABPC1-223	ENST00000523636	FBXO45	P0C2W1	286 aa		7.52	□□□□□ -1.21
PABPC1-223	ENST00000523636	SAFB2	Q14151	953 aa	Known RBP eCLIP	7.52	□□□□□ -1.21
PABPC1-223	ENST00000523636	PPP1R18	Q6NYC8	613 aa		7.52	□□□□□ -1.21
PABPC1-223	ENST00000523636	SIRT1	Q96EB6	747 aa		7.52	□□□□□ -1.21
PABPC1-223	ENST00000523636	CALR3	Q96L12	384 aa	Known RBP	7.52	□□□□□ -1.21
PABPC1-223	ENST00000523636	ALG2	Q9H553	416 aa		7.52	□□□□□ -1.21
PABPC1-223	ENST00000523636	RNF181	Q9P0P0	153 aa		7.52	□□□□□ -1.21
PABPC1-223	ENST00000523636	TIAM2	Q8IVF5	1701 aa		7.52	□□□□□ -1.21
PABPC1-223	ENST00000523636	KDM6A	O15550	1401 aa	Predicted RBP	7.52	□□□□□ -1.21
PABPC1-223	ENST00000523636	WDR17	Q8IZU2	1322 aa		7.52	□□□□□ -1.21
PABPC1-223	ENST00000523636		A0A0G2JLW4	131 aa		7.51	□□□□□ -1.21
PABPC1-223	ENST00000523636	EXOC5	O00471	708 aa		7.51	□□□□□ -1.21
PABPC1-223	ENST00000523636	PPEF1	O14829	653 aa	Predicted RBP	7.51	□□□□□ -1.21
PABPC1-223	ENST00000523636	ZBTB24	O43167	697 aa	Predicted RBP	7.51	□□□□□ -1.21
PABPC1-223	ENST00000523636	GC	P02774	474 aa		7.51	□□□□□ -1.21
PABPC1-223	ENST00000523636	KCNA3	P22001	575 aa		7.51	□□□□□ -1.21
PABPC1-223	ENST00000523636	RPIA	P49247	311 aa		7.51	□□□□□ -1.21
PABPC1-223	ENST00000523636	TOM1L2	Q6ZVM7	507 aa		7.51	□□□□□ -1.21
PABPC1-223	ENST00000523636	SH3BP5L	Q7L8J4	393 aa		7.51	□□□□□ -1.21
PABPC1-223	ENST00000523636	MPND	Q8N594	471 aa		7.51	□□□□□ -1.21
PABPC1-223	ENST00000523636	CCDC97	Q96F63	343 aa	Predicted RBP	7.51	□□□□□ -1.21
PABPC1-223	ENST00000523636	DOT1L	Q8TEK3	1739 aa		7.5	□□□□□ -1.21
PABPC1-223	ENST00000523636	VEGFA	P15692	232 aa	Predicted RBP	7.5	□□□□□ -1.21
PABPC1-223	ENST00000523636	HDGFL1	Q5TGJ6	251 aa		7.5	□□□□□ -1.21
PABPC1-223	ENST00000523636	SH3RF1	Q7Z6J0	888 aa		7.5	□□□□□ -1.21
PABPC1-223	ENST00000523636	BPHL	Q86WA6	291 aa	Predicted RBP	7.5	□□□□□ -1.21
PABPC1-223	ENST00000523636	CCDC82	Q8N4S0	544 aa		7.5	□□□□□ -1.21

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