RNA–Protein interactions for RNA: ENST00000523555.5

PABPC1-222, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-222ENST00000523555 GLTPD2A6NH11 291 aa12.19□□□□□ -0.46
PABPC1-222ENST00000523555 IARSP41252 1262 aaKnown RBP12.19□□□□□ -0.46
PABPC1-222ENST00000523555 GRAPQ13588 217 aa12.19□□□□□ -0.46
PABPC1-222ENST00000523555 DDX46Q7L014 1031 aaKnown RBP12.19□□□□□ -0.46
PABPC1-222ENST00000523555 RTKN2Q8IZC4 609 aa12.19□□□□□ -0.46
PABPC1-222ENST00000523555 GRAPLQ8TC17 118 aaPredicted RBP12.19□□□□□ -0.46
PABPC1-222ENST00000523555 DNAAF4Q8WXU2 420 aa12.19□□□□□ -0.46
PABPC1-222ENST00000523555 CHMP4AQ9BY43 222 aa12.19□□□□□ -0.46
PABPC1-222ENST00000523555 SEC31BQ9NQW1 1179 aa12.19□□□□□ -0.46
PABPC1-222ENST00000523555 ATP6V0A2Q9Y487 856 aa12.19□□□□□ -0.46
PABPC1-222ENST00000523555 A0A1B0GUL6 1792 aa12.18□□□□□ -0.46
PABPC1-222ENST00000523555 E9PSI1 815 aa12.18□□□□□ -0.46
PABPC1-222ENST00000523555 DDNO94850 711 aaPredicted RBP12.18□□□□□ -0.46
PABPC1-222ENST00000523555 TRMT2AQ8IZ69 625 aaKnown RBP12.18□□□□□ -0.46
PABPC1-222ENST00000523555 PSMD1Q99460 953 aa12.18□□□□□ -0.46
PABPC1-222ENST00000523555 KDM2BQ8NHM5 1336 aa12.17□□□□□ -0.46
PABPC1-222ENST00000523555 CDHR2Q9BYE9 1310 aa12.17□□□□□ -0.46
PABPC1-222ENST00000523555 SCN4AP35499 1836 aa12.17□□□□□ -0.46
PABPC1-222ENST00000523555 PDE8AO60658 829 aa12.17□□□□□ -0.46
PABPC1-222ENST00000523555 CASP7P55210 303 aa12.17□□□□□ -0.46
PABPC1-222ENST00000523555 MRPL50Q8N5N7 158 aaKnown RBP12.17□□□□□ -0.46
PABPC1-222ENST00000523555 BCL2L13Q9BXK5 485 aa12.17□□□□□ -0.46
PABPC1-222ENST00000523555 CEP350Q5VT06 3117 aa12.17□□□□□ -0.46
PABPC1-222ENST00000523555 H7C1W4 665 aa12.16□□□□□ -0.46
PABPC1-222ENST00000523555 BBOX1O75936 387 aa12.16□□□□□ -0.46
PABPC1-222ENST00000523555 NEXNQ0ZGT2 675 aa12.16□□□□□ -0.46
PABPC1-222ENST00000523555 GCKRQ14397 625 aa12.16□□□□□ -0.46
PABPC1-222ENST00000523555 AOC3Q16853 763 aa12.16□□□□□ -0.46
PABPC1-222ENST00000523555 BEND3Q5T5X7 828 aa12.16□□□□□ -0.46
PABPC1-222ENST00000523555 CC2D2BQ6DHV5 1058 aa12.16□□□□□ -0.46
PABPC1-222ENST00000523555 UBE3BQ7Z3V4 1068 aa12.16□□□□□ -0.46
PABPC1-222ENST00000523555 SP8Q8IXZ3 490 aa12.16□□□□□ -0.46
PABPC1-222ENST00000523555 SCN9AQ15858 1988 aa12.16□□□□□ -0.46
PABPC1-222ENST00000523555 FZD9O00144 591 aa12.15□□□□□ -0.46
PABPC1-222ENST00000523555 CTSWP56202 376 aa12.15□□□□□ -0.46
PABPC1-222ENST00000523555 LINS1Q8NG48 757 aa12.15□□□□□ -0.46
PABPC1-222ENST00000523555 SSH1Q8WYL5 1049 aa12.15□□□□□ -0.46
PABPC1-222ENST00000523555 GPR101Q96P66 508 aaPredicted RBP12.15□□□□□ -0.46
PABPC1-222ENST00000523555 TOMM70O94826 608 aa12.14□□□□□ -0.47
PABPC1-222ENST00000523555 POTEIP0CG38 1075 aa12.14□□□□□ -0.47
PABPC1-222ENST00000523555 POTEJP0CG39 1038 aa12.14□□□□□ -0.47
PABPC1-222ENST00000523555 GPSM2P81274 684 aa12.14□□□□□ -0.47
PABPC1-222ENST00000523555 DPP8Q6V1X1 898 aaPredicted RBP12.14□□□□□ -0.47
PABPC1-222ENST00000523555 MPNDQ8N594 471 aa12.14□□□□□ -0.47
PABPC1-222ENST00000523555 TTLL11Q8NHH1 800 aa12.14□□□□□ -0.47
PABPC1-222ENST00000523555 RTFDC1Q9BY42 306 aaPredicted RBP12.14□□□□□ -0.47
PABPC1-222ENST00000523555 GREM2Q9H772 168 aa12.14□□□□□ -0.47
PABPC1-222ENST00000523555 ADAMTSL1Q8N6G6 1762 aa12.14□□□□□ -0.47
PABPC1-222ENST00000523555 WTIPA6NIX2 430 aaPredicted RBP12.13□□□□□ -0.47
PABPC1-222ENST00000523555 PPIP5K2O43314 1243 aa12.13□□□□□ -0.47
PABPC1-222ENST00000523555 RPS8P62241 208 aaKnown RBP12.13□□□□□ -0.47
PABPC1-222ENST00000523555 CCDC152Q4G0S7 254 aa12.13□□□□□ -0.47
PABPC1-222ENST00000523555 DPY19L2Q6NUT2 758 aa12.13□□□□□ -0.47
PABPC1-222ENST00000523555 SLC4A10Q6U841 1118 aa12.13□□□□□ -0.47
PABPC1-222ENST00000523555 LARGE2Q8N3Y3 721 aa12.13□□□□□ -0.47
PABPC1-222ENST00000523555 POLLQ9UGP5 575 aa12.13□□□□□ -0.47
PABPC1-222ENST00000523555 ZNF646O15015 1829 aaPredicted RBP12.13□□□□□ -0.47
PABPC1-222ENST00000523555 PSME4Q14997 1843 aa12.12□□□□□ -0.47
PABPC1-222ENST00000523555 VEGFAP15692 232 aaPredicted RBP12.12□□□□□ -0.47
PABPC1-222ENST00000523555 FAM161AQ3B820 660 aa12.12□□□□□ -0.47
PABPC1-222ENST00000523555 EPHA10Q5JZY3 1008 aa12.12□□□□□ -0.47
PABPC1-222ENST00000523555 NSFL1CQ9UNZ2 370 aaKnown RBP12.12□□□□□ -0.47
PABPC1-222ENST00000523555 YDJCA8MPS7 323 aa12.11□□□□□ -0.47
PABPC1-222ENST00000523555 FOXO4P98177 505 aa12.11□□□□□ -0.47
PABPC1-222ENST00000523555 KIAA2012Q0VF49 1180 aa12.11□□□□□ -0.47
PABPC1-222ENST00000523555 GRIPAP1Q4V328 841 aa12.11□□□□□ -0.47
PABPC1-222ENST00000523555 RBM46Q8TBY0 533 aaKnown RBP12.11□□□□□ -0.47
PABPC1-222ENST00000523555 JDP2Q8WYK2 163 aa12.11□□□□□ -0.47
PABPC1-222ENST00000523555 L3MBTL3Q96JM7 780 aaPredicted RBP12.11□□□□□ -0.47
PABPC1-222ENST00000523555 PLA2G12BQ9BX93 195 aa12.11□□□□□ -0.47
PABPC1-222ENST00000523555 RTL9Q8NET4 1388 aa12.1□□□□□ -0.47
PABPC1-222ENST00000523555 RIMBP2O15034 1052 aa12.1□□□□□ -0.47
PABPC1-222ENST00000523555 CSF1RP07333 972 aa12.1□□□□□ -0.47
PABPC1-222ENST00000523555 HNRNPUQ00839 825 aaKnown RBP eCLIP12.1□□□□□ -0.47
PABPC1-222ENST00000523555 TMC4Q7Z404 712 aa12.1□□□□□ -0.47
PABPC1-222ENST00000523555 NIM1KQ8IY84 436 aa12.1□□□□□ -0.47
PABPC1-222ENST00000523555 C16orf71Q8IYS4 520 aaPredicted RBP12.1□□□□□ -0.47
PABPC1-222ENST00000523555 TBC1D16Q8TBP0 767 aa12.1□□□□□ -0.47
PABPC1-222ENST00000523555 KAZALD1Q96I82 304 aa12.1□□□□□ -0.47
PABPC1-222ENST00000523555 TMX4Q9H1E5 349 aaPredicted RBP12.1□□□□□ -0.47
PABPC1-222ENST00000523555 GJA3Q9Y6H8 435 aa12.1□□□□□ -0.47
PABPC1-222ENST00000523555 GRM8O00222 908 aa12.09□□□□□ -0.47
PABPC1-222ENST00000523555 NBPF7P0C2Y1 421 aaPredicted RBP12.09□□□□□ -0.47
PABPC1-222ENST00000523555 HSP90B1P14625 803 aaKnown RBP12.09□□□□□ -0.47
PABPC1-222ENST00000523555 HSPA6P17066 643 aa12.09□□□□□ -0.47
PABPC1-222ENST00000523555 ITGA6P23229 1130 aa12.09□□□□□ -0.47
PABPC1-222ENST00000523555 SCNN1DP51172 638 aa12.09□□□□□ -0.47
PABPC1-222ENST00000523555 EIF6P56537 245 aaKnown RBP12.09□□□□□ -0.47
PABPC1-222ENST00000523555 HTRA3P83110 453 aa12.09□□□□□ -0.47
PABPC1-222ENST00000523555 ALDH1L2Q3SY69 923 aa12.09□□□□□ -0.47
PABPC1-222ENST00000523555 ANKRD18AQ8IVF6 992 aa12.09□□□□□ -0.47
PABPC1-222ENST00000523555 SUPT20HQ8NEM7 779 aa12.09□□□□□ -0.47
PABPC1-222ENST00000523555 SRCIN1Q9C0H9 1055 aa12.09□□□□□ -0.47
PABPC1-222ENST00000523555 TAF1DQ9H5J8 278 aaPredicted RBP12.09□□□□□ -0.47
PABPC1-222ENST00000523555 DBNDD1Q9H9R9 158 aa12.09□□□□□ -0.47
PABPC1-222ENST00000523555 SMC4Q9NTJ3 1288 aa12.09□□□□□ -0.47
PABPC1-222ENST00000523555 C6orf229H3BNL8 230 aa12.08□□□□□ -0.48
PABPC1-222ENST00000523555 CXCL9Q07325 125 aa12.08□□□□□ -0.48
PABPC1-222ENST00000523555 DOK7Q18PE1 504 aa12.08□□□□□ -0.48
PABPC1-222ENST00000523555 GPC2Q8N158 579 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms