RNA–Protein interactions for RNA: ENST00000523190.5

PVT1-217, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 443 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-217ENST00000523190 COL24A1Q17RW2 1714 aa8.3□□□□□ -1.08
PVT1-217ENST00000523190 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.3□□□□□ -1.08
PVT1-217ENST00000523190 SPDYE2BA6NHP3 402 aa8.3□□□□□ -1.08
PVT1-217ENST00000523190 RGL2O15211 777 aa8.3□□□□□ -1.08
PVT1-217ENST00000523190 PDE8AO60658 829 aa8.3□□□□□ -1.08
PVT1-217ENST00000523190 ZPR1O75312 459 aa8.3□□□□□ -1.08
PVT1-217ENST00000523190 SPDYE6P0CI01 402 aa8.3□□□□□ -1.08
PVT1-217ENST00000523190 RFC4P35249 363 aa8.3□□□□□ -1.08
PVT1-217ENST00000523190 CTSWP56202 376 aa8.3□□□□□ -1.08
PVT1-217ENST00000523190 PTPN12Q05209 780 aaKnown RBP8.3□□□□□ -1.08
PVT1-217ENST00000523190 G3BP1Q13283 466 aaKnown RBP eCLIP8.3□□□□□ -1.08
PVT1-217ENST00000523190 ZNF827Q17R98 1081 aa8.3□□□□□ -1.08
PVT1-217ENST00000523190 FAM161AQ3B820 660 aa8.3□□□□□ -1.08
PVT1-217ENST00000523190 SPDYE2Q495Y8 402 aa8.3□□□□□ -1.08
PVT1-217ENST00000523190 C8orf34Q49A92 452 aa8.3□□□□□ -1.08
PVT1-217ENST00000523190 CLEC4GQ6UXB4 293 aa8.3□□□□□ -1.08
PVT1-217ENST00000523190 PLEKHM2Q8IWE5 1019 aa8.3□□□□□ -1.08
PVT1-217ENST00000523190 COPRSQ9NQ92 184 aa8.3□□□□□ -1.08
PVT1-217ENST00000523190 LAMB2P55268 1798 aa8.3□□□□□ -1.08
PVT1-217ENST00000523190 SH3TC1Q8TE82 1336 aa8.29□□□□□ -1.08
PVT1-217ENST00000523190 SALL3Q9BXA9 1300 aa8.29□□□□□ -1.08
PVT1-217ENST00000523190 DDX60Q8IY21 1712 aaKnown RBP8.29□□□□□ -1.08
PVT1-217ENST00000523190 SASH1O94885 1247 aa8.29□□□□□ -1.08
PVT1-217ENST00000523190 HCLS1P14317 486 aaPredicted RBP8.29□□□□□ -1.08
PVT1-217ENST00000523190 SSFA2P28290 1259 aa8.29□□□□□ -1.08
PVT1-217ENST00000523190 NUTM1Q86Y26 1132 aa8.29□□□□□ -1.08
PVT1-217ENST00000523190 ERC1Q8IUD2 1116 aa8.29□□□□□ -1.08
PVT1-217ENST00000523190 ZNF594Q96JF6 807 aaPredicted RBP8.29□□□□□ -1.08
PVT1-217ENST00000523190 TUBGCP6Q96RT7 1819 aa8.29□□□□□ -1.08
PVT1-217ENST00000523190 ABCC12Q96J65 1359 aa8.28□□□□□ -1.08
PVT1-217ENST00000523190 CSF1RP07333 972 aa8.28□□□□□ -1.08
PVT1-217ENST00000523190 GSPT1P15170 499 aaKnown RBP8.28□□□□□ -1.08
PVT1-217ENST00000523190 PDE1AP54750 535 aa8.28□□□□□ -1.08
PVT1-217ENST00000523190 EN1Q05925 392 aaPredicted RBP8.28□□□□□ -1.08
PVT1-217ENST00000523190 EZH2Q15910 746 aaKnown RBP8.28□□□□□ -1.08
PVT1-217ENST00000523190 CCDC57Q2TAC2 916 aa8.28□□□□□ -1.08
PVT1-217ENST00000523190 ERFEQ4G0M1 354 aa8.28□□□□□ -1.08
PVT1-217ENST00000523190 TTC22Q5TAA0 569 aa8.28□□□□□ -1.08
PVT1-217ENST00000523190 TSHZ3Q63HK5 1081 aa8.28□□□□□ -1.08
PVT1-217ENST00000523190 TTLL11Q8NHH1 800 aa8.28□□□□□ -1.08
PVT1-217ENST00000523190 AKT1S1Q96B36 256 aa8.28□□□□□ -1.08
PVT1-217ENST00000523190 BACH2Q9BYV9 841 aa8.28□□□□□ -1.08
PVT1-217ENST00000523190 GREM2Q9H772 168 aa8.28□□□□□ -1.08
PVT1-217ENST00000523190 TAOK2Q9UL54 1235 aa8.28□□□□□ -1.08
PVT1-217ENST00000523190 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.28□□□□□ -1.08
PVT1-217ENST00000523190 MYH3P11055 1940 aa8.28□□□□□ -1.08
PVT1-217ENST00000523190 MX1P20591 662 aa8.27□□□□□ -1.09
PVT1-217ENST00000523190 ITGA6P23229 1130 aa8.27□□□□□ -1.09
PVT1-217ENST00000523190 HMGB2P26583 209 aaKnown RBP8.27□□□□□ -1.09
PVT1-217ENST00000523190 IFIT5Q13325 482 aaKnown RBP8.27□□□□□ -1.09
PVT1-217ENST00000523190 NFIXQ14938 502 aa8.27□□□□□ -1.09
PVT1-217ENST00000523190 LRRC24Q50LG9 513 aa8.27□□□□□ -1.09
PVT1-217ENST00000523190 BMP2KLQ5H9B9 411 aa8.27□□□□□ -1.09
PVT1-217ENST00000523190 TAF7LQ5H9L4 462 aa8.27□□□□□ -1.09
PVT1-217ENST00000523190 PAXIP1Q6ZW49 1069 aaPredicted RBP8.27□□□□□ -1.09
PVT1-217ENST00000523190 ATG9AQ7Z3C6 839 aa8.27□□□□□ -1.09
PVT1-217ENST00000523190 CLASRPQ8N2M8 674 aaKnown RBP8.27□□□□□ -1.09
PVT1-217ENST00000523190 SETDB2Q96T68 719 aa8.27□□□□□ -1.09
PVT1-217ENST00000523190 PUS3Q9BZE2 481 aaKnown RBP8.27□□□□□ -1.09
PVT1-217ENST00000523190 LRP5O75197 1615 aa8.27□□□□□ -1.09
PVT1-217ENST00000523190 CARMIL3Q8ND23 1372 aa8.26□□□□□ -1.09
PVT1-217ENST00000523190 ANKRD18BA2A2Z9 1011 aa8.26□□□□□ -1.09
PVT1-217ENST00000523190 EYA2O00167 538 aa8.26□□□□□ -1.09
PVT1-217ENST00000523190 GYS1P13807 737 aa8.26□□□□□ -1.09
PVT1-217ENST00000523190 GTF2E1P29083 439 aaPredicted RBP8.26□□□□□ -1.09
PVT1-217ENST00000523190 TFCP2Q12800 502 aa8.26□□□□□ -1.09
PVT1-217ENST00000523190 AACSQ86V21 672 aa8.26□□□□□ -1.09
PVT1-217ENST00000523190 NBPF5PQ86XG9 351 aaPredicted RBP8.26□□□□□ -1.09
PVT1-217ENST00000523190 CCDC24Q8N4L8 307 aa8.26□□□□□ -1.09
PVT1-217ENST00000523190 SPRYD3Q8NCJ5 442 aa8.26□□□□□ -1.09
PVT1-217ENST00000523190 EAF2Q96CJ1 260 aaPredicted RBP8.26□□□□□ -1.09
PVT1-217ENST00000523190 CAMKK2Q96RR4 588 aa8.26□□□□□ -1.09
PVT1-217ENST00000523190 NYXQ9GZU5 481 aa8.26□□□□□ -1.09
PVT1-217ENST00000523190 CCDC8Q9H0W5 538 aaPredicted RBP8.26□□□□□ -1.09
PVT1-217ENST00000523190 OSBPL3Q9H4L5 887 aa8.26□□□□□ -1.09
PVT1-217ENST00000523190 TFCP2L1Q9NZI6 479 aa8.26□□□□□ -1.09
PVT1-217ENST00000523190 CASZ1Q86V15 1759 aa8.25□□□□□ -1.09
PVT1-217ENST00000523190 TNRC6CQ9HCJ0 1690 aaKnown RBP8.25□□□□□ -1.09
PVT1-217ENST00000523190 CIAO1O76071 339 aa8.25□□□□□ -1.09
PVT1-217ENST00000523190 IFIT2P09913 472 aaKnown RBP8.25□□□□□ -1.09
PVT1-217ENST00000523190 HSP90B1P14625 803 aaKnown RBP8.25□□□□□ -1.09
PVT1-217ENST00000523190 IL15P40933 162 aaPredicted RBP8.25□□□□□ -1.09
PVT1-217ENST00000523190 BAG6P46379 1132 aa8.25□□□□□ -1.09
PVT1-217ENST00000523190 SF3B2Q13435 895 aaKnown RBP8.25□□□□□ -1.09
PVT1-217ENST00000523190 CCDC152Q4G0S7 254 aa8.25□□□□□ -1.09
PVT1-217ENST00000523190 TNNI3KQ59H18 835 aa8.25□□□□□ -1.09
PVT1-217ENST00000523190 C3orf67Q6ZVT6 689 aa8.25□□□□□ -1.09
PVT1-217ENST00000523190 DEFB132Q7Z7B7 95 aa8.25□□□□□ -1.09
PVT1-217ENST00000523190 COL23A1Q86Y22 540 aaPredicted RBP8.25□□□□□ -1.09
PVT1-217ENST00000523190 ANO8Q9HCE9 1232 aaPredicted RBP8.25□□□□□ -1.09
PVT1-217ENST00000523190 SEC31BQ9NQW1 1179 aa8.25□□□□□ -1.09
PVT1-217ENST00000523190 TLR7Q9NYK1 1049 aaKnown RBP8.25□□□□□ -1.09
PVT1-217ENST00000523190 STAP2Q9UGK3 403 aa8.25□□□□□ -1.09
PVT1-217ENST00000523190 RBM19Q9Y4C8 960 aaKnown RBP8.25□□□□□ -1.09
PVT1-217ENST00000523190 FPGT-TNNI3KV9GXZ4 949 aa8.25□□□□□ -1.09
PVT1-217ENST00000523190 ZNF609O15014 1411 aa8.25□□□□□ -1.09
PVT1-217ENST00000523190 RIC1Q4ADV7 1423 aa8.25□□□□□ -1.09
PVT1-217ENST00000523190 AOX1Q06278 1338 aa8.25□□□□□ -1.09
PVT1-217ENST00000523190 PNPLA7Q6ZV29 1317 aa8.25□□□□□ -1.09
PVT1-217ENST00000523190 COL4A1P02462 1669 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 137.4 ms