RNA–Protein interactions for RNA: ENST00000522883.1

CDK16-218, Transcript of cyclin dependent kinase 16, humanhuman

TSL 4

Gene CDK16, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-218ENST00000522883 FAM89AQ96GI7 184 aa17.67■□□□□ 0.42
CDK16-218ENST00000522883 MEIS3Q99687 375 aa17.67■□□□□ 0.42
CDK16-218ENST00000522883 USP44Q9H0E7 712 aa17.67■□□□□ 0.42
CDK16-218ENST00000522883 ZNF219Q9P2Y4 722 aaPredicted RBP17.67■□□□□ 0.42
CDK16-218ENST00000522883 GRM8O00222 908 aa17.66■□□□□ 0.42
CDK16-218ENST00000522883 SH3TC1Q8TE82 1336 aa17.66■□□□□ 0.42
CDK16-218ENST00000522883 GRIN3BO60391 1043 aa17.65■□□□□ 0.42
CDK16-218ENST00000522883 GNAI2P04899 355 aa17.65■□□□□ 0.42
CDK16-218ENST00000522883 TTLL6Q8N841 843 aa17.65■□□□□ 0.42
CDK16-218ENST00000522883 MASTLQ96GX5 879 aa17.65■□□□□ 0.42
CDK16-218ENST00000522883 CCDC136Q96JN2 1154 aa17.65■□□□□ 0.42
CDK16-218ENST00000522883 PDZRN3Q9UPQ7 1066 aa17.65■□□□□ 0.42
CDK16-218ENST00000522883 UTYO14607 1347 aa17.65■□□□□ 0.42
CDK16-218ENST00000522883 CCDC88AQ3V6T2 1871 aa17.65■□□□□ 0.42
CDK16-218ENST00000522883 MYH3P11055 1940 aa17.64■□□□□ 0.42
CDK16-218ENST00000522883 RIC1Q4ADV7 1423 aa17.64■□□□□ 0.42
CDK16-218ENST00000522883 KLRG2A4D1S0 409 aaPredicted RBP17.64■□□□□ 0.41
CDK16-218ENST00000522883 NPR1P16066 1061 aa17.64■□□□□ 0.41
CDK16-218ENST00000522883 STYK1Q6J9G0 422 aa17.64■□□□□ 0.41
CDK16-218ENST00000522883 NBPF7P0C2Y1 421 aaPredicted RBP17.63■□□□□ 0.41
CDK16-218ENST00000522883 SLC10A5Q5PT55 438 aa17.63■□□□□ 0.41
CDK16-218ENST00000522883 ARHGAP27Q6ZUM4 889 aa17.63■□□□□ 0.41
CDK16-218ENST00000522883 RPGRQ92834 1020 aaKnown RBP17.63■□□□□ 0.41
CDK16-218ENST00000522883 NLRP3Q96P20 1036 aa17.63■□□□□ 0.41
CDK16-218ENST00000522883 CRY2Q49AN0 593 aa17.62■□□□□ 0.41
CDK16-218ENST00000522883 CNKSR1Q969H4 720 aa17.62■□□□□ 0.41
CDK16-218ENST00000522883 C1orf115Q9H7X2 142 aa17.62■□□□□ 0.41
CDK16-218ENST00000522883 SBF1O95248 1867 aa17.62■□□□□ 0.41
CDK16-218ENST00000522883 IRS4O14654 1257 aaPredicted RBP17.61■□□□□ 0.41
CDK16-218ENST00000522883 C21orf2O43822 256 aa17.61■□□□□ 0.41
CDK16-218ENST00000522883 PCCAP05165 728 aaPredicted RBP17.61■□□□□ 0.41
CDK16-218ENST00000522883 PRPF40BQ6NWY9 871 aaKnown RBP17.61■□□□□ 0.41
CDK16-218ENST00000522883 ZBTB38Q8NAP3 1195 aaPredicted RBP17.61■□□□□ 0.41
CDK16-218ENST00000522883 LRRFIP2Q9Y608 721 aaKnown RBP17.61■□□□□ 0.41
CDK16-218ENST00000522883 H7C1W4 665 aa17.6■□□□□ 0.41
CDK16-218ENST00000522883 UBE3BQ7Z3V4 1068 aa17.6■□□□□ 0.41
CDK16-218ENST00000522883 RPAP2Q8IXW5 612 aaPredicted RBP17.6■□□□□ 0.41
CDK16-218ENST00000522883 PCDHB15Q9Y5E8 787 aa17.6■□□□□ 0.41
CDK16-218ENST00000522883 FER1L6Q2WGJ9 1857 aa17.6■□□□□ 0.41
CDK16-218ENST00000522883 B4GALNT3Q6L9W6 998 aa17.59■□□□□ 0.41
CDK16-218ENST00000522883 RBM17Q96I25 401 aaKnown RBP17.59■□□□□ 0.41
CDK16-218ENST00000522883 RWDD1Q9H446 243 aaPredicted RBP17.59■□□□□ 0.41
CDK16-218ENST00000522883 HSP90B1P14625 803 aaKnown RBP17.58■□□□□ 0.4
CDK16-218ENST00000522883 ALDH1B1P30837 517 aa17.58■□□□□ 0.4
CDK16-218ENST00000522883 CASP7P55210 303 aa17.58■□□□□ 0.4
CDK16-218ENST00000522883 OLFM4Q6UX06 510 aa17.58■□□□□ 0.4
CDK16-218ENST00000522883 SLC51AQ86UW1 340 aa17.58■□□□□ 0.4
CDK16-218ENST00000522883 CDHR2Q9BYE9 1310 aa17.57■□□□□ 0.4
CDK16-218ENST00000522883 SPEF2Q9C093 1822 aa17.57■□□□□ 0.4
CDK16-218ENST00000522883 HMMRO75330 724 aa17.57■□□□□ 0.4
CDK16-218ENST00000522883 HOXA10P31260 410 aaPredicted RBP17.57■□□□□ 0.4
CDK16-218ENST00000522883 RASSF7Q02833 373 aa17.57■□□□□ 0.4
CDK16-218ENST00000522883 HDAC1Q13547 482 aaPredicted RBP17.57■□□□□ 0.4
CDK16-218ENST00000522883 CEP85Q6P2H3 762 aa17.57■□□□□ 0.4
CDK16-218ENST00000522883 ANKRD44Q8N8A2 993 aa17.57■□□□□ 0.4
CDK16-218ENST00000522883 CCDC85AQ96PX6 553 aaPredicted RBP17.57■□□□□ 0.4
CDK16-218ENST00000522883 COL4A1P02462 1669 aa17.56■□□□□ 0.4
CDK16-218ENST00000522883 SUCLG2Q96I99 432 aa17.56■□□□□ 0.4
CDK16-218ENST00000522883 PDE8AO60658 829 aa17.55■□□□□ 0.4
CDK16-218ENST00000522883 YY1P25490 414 aa17.55■□□□□ 0.4
CDK16-218ENST00000522883 ATP8B2P98198 1209 aa17.55■□□□□ 0.4
CDK16-218ENST00000522883 DDX46Q7L014 1031 aaKnown RBP17.55■□□□□ 0.4
CDK16-218ENST00000522883 C7orf43Q8WVR3 580 aa17.55■□□□□ 0.4
CDK16-218ENST00000522883 CRAMP1Q96RY5 1269 aa17.55■□□□□ 0.4
CDK16-218ENST00000522883 BICC1Q9H694 974 aaKnown RBP17.55■□□□□ 0.4
CDK16-218ENST00000522883 MTX1Q13505 466 aa17.54■□□□□ 0.4
CDK16-218ENST00000522883 SF3B3Q15393 1217 aaKnown RBP17.54■□□□□ 0.4
CDK16-218ENST00000522883 CENPQQ7L2Z9 268 aaPredicted RBP17.54■□□□□ 0.4
CDK16-218ENST00000522883 KAZALD1Q96I82 304 aa17.54■□□□□ 0.4
CDK16-218ENST00000522883 PLA2G12BQ9BX93 195 aa17.54■□□□□ 0.4
CDK16-218ENST00000522883 NFKBIEO00221 500 aa17.53■□□□□ 0.4
CDK16-218ENST00000522883 PPEF1O14829 653 aaPredicted RBP17.53■□□□□ 0.4
CDK16-218ENST00000522883 SIRT2Q8IXJ6 389 aa17.53■□□□□ 0.4
CDK16-218ENST00000522883 DICER1Q9UPY3 1922 aaKnown RBP17.53■□□□□ 0.4
CDK16-218ENST00000522883 SRGAP3O43295 1099 aa17.52■□□□□ 0.4
CDK16-218ENST00000522883 IGHDP01880 384 aa17.52■□□□□ 0.4
CDK16-218ENST00000522883 GRAPQ13588 217 aa17.52■□□□□ 0.4
CDK16-218ENST00000522883 RABL6Q3YEC7 729 aaPredicted RBP17.52■□□□□ 0.4
CDK16-218ENST00000522883 CCDC93Q567U6 631 aa17.52■□□□□ 0.4
CDK16-218ENST00000522883 GRAPLQ8TC17 118 aaPredicted RBP17.52■□□□□ 0.4
CDK16-218ENST00000522883 SEC31BQ9NQW1 1179 aa17.52■□□□□ 0.4
CDK16-218ENST00000522883 PRELPP51888 382 aa17.51■□□□□ 0.39
CDK16-218ENST00000522883 CTSWP56202 376 aa17.51■□□□□ 0.39
CDK16-218ENST00000522883 FOXO4P98177 505 aa17.51■□□□□ 0.39
CDK16-218ENST00000522883 CCDC152Q4G0S7 254 aa17.51■□□□□ 0.39
CDK16-218ENST00000522883 C9orf131Q5VYM1 1079 aa17.51■□□□□ 0.39
CDK16-218ENST00000522883 CELF1Q92879 486 aaKnown RBP17.51■□□□□ 0.39
CDK16-218ENST00000522883 KDM2BQ8NHM5 1336 aa17.5■□□□□ 0.39
CDK16-218ENST00000522883 TIAM2Q8IVF5 1701 aa17.5■□□□□ 0.39
CDK16-218ENST00000522883 PNMA6EA0A0J9YXQ4 647 aa17.5■□□□□ 0.39
CDK16-218ENST00000522883 POLA2Q14181 598 aa17.5■□□□□ 0.39
CDK16-218ENST00000522883 EPHA10Q5JZY3 1008 aa17.5■□□□□ 0.39
CDK16-218ENST00000522883 SOGA3Q5TF21 947 aa17.5■□□□□ 0.39
CDK16-218ENST00000522883 LMBR1LQ6UX01 489 aa17.5■□□□□ 0.39
CDK16-218ENST00000522883 TTLL11Q8NHH1 800 aa17.5■□□□□ 0.39
CDK16-218ENST00000522883 SSH3Q8TE77 659 aa17.5■□□□□ 0.39
CDK16-218ENST00000522883 GCC1Q96CN9 775 aa17.5■□□□□ 0.39
CDK16-218ENST00000522883 RNF181Q9P0P0 153 aa17.5■□□□□ 0.39
CDK16-218ENST00000522883 TAOK3Q9H2K8 898 aa17.49■□□□□ 0.39
CDK16-218ENST00000522883 GREM2Q9H772 168 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms