RNA–Protein interactions for RNA: ENST00000522665.5

NDRG1-223, Transcript of N-myc downstream regulated 1, humanhuman

TSL 2

Gene NDRG1, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-223ENST00000522665 UPF1Q92900 1129 aaKnown RBP eCLIP18.68■□□□□ 0.587e-7■□□□□ 9.8
NDRG1-223ENST00000522665 LRRCC1Q9C099 1032 aa18.68■□□□□ 0.58
NDRG1-223ENST00000522665 COPRSQ9NQ92 184 aa18.68■□□□□ 0.58
NDRG1-223ENST00000522665 RTL9Q8NET4 1388 aa18.68■□□□□ 0.58
NDRG1-223ENST00000522665 HCLS1P14317 486 aaPredicted RBP18.67■□□□□ 0.58
NDRG1-223ENST00000522665 TM4SF1P30408 202 aa18.67■□□□□ 0.58
NDRG1-223ENST00000522665 RFX5P48382 616 aaPredicted RBP18.67■□□□□ 0.58
NDRG1-223ENST00000522665 G3BP1Q13283 466 aaKnown RBP eCLIP18.67■□□□□ 0.58
NDRG1-223ENST00000522665 CCDC152Q4G0S7 254 aa18.67■□□□□ 0.58
NDRG1-223ENST00000522665 SLC10A5Q5PT55 438 aa18.67■□□□□ 0.58
NDRG1-223ENST00000522665 TTLL11Q8NHH1 800 aa18.67■□□□□ 0.58
NDRG1-223ENST00000522665 ABCC12Q96J65 1359 aa18.67■□□□□ 0.58
NDRG1-223ENST00000522665 ST5P78524 1137 aa18.66■□□□□ 0.58
NDRG1-223ENST00000522665 FAM161AQ3B820 660 aa18.66■□□□□ 0.58
NDRG1-223ENST00000522665 KIF1BPQ96EK5 621 aa18.66■□□□□ 0.58
NDRG1-223ENST00000522665 LNPKQ9C0E8 428 aa18.66■□□□□ 0.58
NDRG1-223ENST00000522665 ANKRD18BA2A2Z9 1011 aa18.65■□□□□ 0.58
NDRG1-223ENST00000522665 APBB1O00213 710 aa18.65■□□□□ 0.58
NDRG1-223ENST00000522665 POLRMTO00411 1230 aaKnown RBP18.65■□□□□ 0.58
NDRG1-223ENST00000522665 SERPINB2P05120 415 aa18.65■□□□□ 0.58
NDRG1-223ENST00000522665 PTPN12Q05209 780 aaKnown RBP18.65■□□□□ 0.58
NDRG1-223ENST00000522665 TAF7LQ5H9L4 462 aa18.65■□□□□ 0.58
NDRG1-223ENST00000522665 FBXO3Q9UK99 471 aa18.65■□□□□ 0.58
NDRG1-223ENST00000522665 PA2G4Q9UQ80 394 aaKnown RBP18.65■□□□□ 0.58
NDRG1-223ENST00000522665 LRP5O75197 1615 aa18.64■□□□□ 0.57
NDRG1-223ENST00000522665 ITGA6P23229 1130 aa18.64■□□□□ 0.57
NDRG1-223ENST00000522665 GREM2Q9H772 168 aa18.64■□□□□ 0.57
NDRG1-223ENST00000522665 CIAO1O76071 339 aa18.63■□□□□ 0.57
NDRG1-223ENST00000522665 DDR1Q08345 913 aa18.63■□□□□ 0.57
NDRG1-223ENST00000522665 SF3B3Q15393 1217 aaKnown RBP18.63■□□□□ 0.57
NDRG1-223ENST00000522665 RHPN1Q8TCX5 695 aa18.63■□□□□ 0.57
NDRG1-223ENST00000522665 NLRP3Q96P20 1036 aa18.63■□□□□ 0.57
NDRG1-223ENST00000522665 SIL1Q9H173 461 aa18.63■□□□□ 0.57
NDRG1-223ENST00000522665 PARP3Q9Y6F1 533 aa18.63■□□□□ 0.57
NDRG1-223ENST00000522665 RGS3P49796 1198 aa18.62■□□□□ 0.57
NDRG1-223ENST00000522665 PRR5LQ6MZQ0 368 aa18.62■□□□□ 0.57
NDRG1-223ENST00000522665 KLHDC4Q8TBB5 520 aa18.62■□□□□ 0.57
NDRG1-223ENST00000522665 SLC16A10Q8TF71 515 aa18.62■□□□□ 0.57
NDRG1-223ENST00000522665 CCDC85AQ96PX6 553 aaPredicted RBP18.62■□□□□ 0.57
NDRG1-223ENST00000522665 NRXN2Q9P2S2 1712 aa18.62■□□□□ 0.57
NDRG1-223ENST00000522665 MMP10P09238 476 aa18.61■□□□□ 0.57
NDRG1-223ENST00000522665 IL15P40933 162 aaPredicted RBP18.61■□□□□ 0.57
NDRG1-223ENST00000522665 CDC5LQ99459 802 aaKnown RBP18.61■□□□□ 0.57
NDRG1-223ENST00000522665 TNRC6CQ9HCJ0 1690 aaKnown RBP18.6■□□□□ 0.57
NDRG1-223ENST00000522665 EYA2O00167 538 aa18.6■□□□□ 0.57
NDRG1-223ENST00000522665 SMARCA5O60264 1052 aaPredicted RBP18.6■□□□□ 0.57
NDRG1-223ENST00000522665 PDE4AP27815 886 aa18.6■□□□□ 0.57
NDRG1-223ENST00000522665 MSL1Q68DK7 614 aa18.6■□□□□ 0.57
NDRG1-223ENST00000522665 CLASRPQ8N2M8 674 aaKnown RBP18.6■□□□□ 0.57
NDRG1-223ENST00000522665 SKAP1Q86WV1 359 aa18.59■□□□□ 0.57
NDRG1-223ENST00000522665 CASZ1Q86V15 1759 aa18.59■□□□□ 0.57
NDRG1-223ENST00000522665 IGHMBP2P38935 993 aaKnown RBP18.58■□□□□ 0.56
NDRG1-223ENST00000522665 ZNF594Q96JF6 807 aaPredicted RBP18.58■□□□□ 0.56
NDRG1-223ENST00000522665 IL1RAPL2Q9NP60 686 aa18.58■□□□□ 0.56
NDRG1-223ENST00000522665 SASH1O94885 1247 aa18.57■□□□□ 0.56
NDRG1-223ENST00000522665 LDHAL6AQ6ZMR3 332 aa18.57■□□□□ 0.56
NDRG1-223ENST00000522665 C3orf67Q6ZVT6 689 aa18.57■□□□□ 0.56
NDRG1-223ENST00000522665 ATG9AQ7Z3C6 839 aa18.57■□□□□ 0.56
NDRG1-223ENST00000522665 CNNM1Q9NRU3 951 aa18.57■□□□□ 0.56
NDRG1-223ENST00000522665 DDX46Q7L014 1031 aaKnown RBP18.56■□□□□ 0.56
NDRG1-223ENST00000522665 ANKRD18AQ8IVF6 992 aa18.56■□□□□ 0.56
NDRG1-223ENST00000522665 CCDC24Q8N4L8 307 aa18.56■□□□□ 0.56
NDRG1-223ENST00000522665 GPATCH3Q96I76 525 aa18.56■□□□□ 0.56
NDRG1-223ENST00000522665 MPHOSPH8Q99549 860 aa18.56■□□□□ 0.56
NDRG1-223ENST00000522665 BRIP1Q9BX63 1249 aa18.56■□□□□ 0.56
NDRG1-223ENST00000522665 GPR108Q9NPR9 543 aa18.56■□□□□ 0.56
NDRG1-223ENST00000522665 AOX1Q06278 1338 aa18.55■□□□□ 0.56
NDRG1-223ENST00000522665 IFIT2P09913 472 aaKnown RBP18.55■□□□□ 0.56
NDRG1-223ENST00000522665 TFCP2Q12800 502 aa18.55■□□□□ 0.56
NDRG1-223ENST00000522665 CRY2Q49AN0 593 aa18.55■□□□□ 0.56
NDRG1-223ENST00000522665 LRRC24Q50LG9 513 aa18.55■□□□□ 0.56
NDRG1-223ENST00000522665 RPGRQ92834 1020 aaKnown RBP18.55■□□□□ 0.56
NDRG1-223ENST00000522665 BCL11AQ9H165 835 aa18.55■□□□□ 0.56
NDRG1-223ENST00000522665 SEC31BQ9NQW1 1179 aa18.55■□□□□ 0.56
NDRG1-223ENST00000522665 CEP126Q9P2H0 1117 aa18.55■□□□□ 0.56
NDRG1-223ENST00000522665 MROH5Q6ZUA9 1318 aa18.54■□□□□ 0.56
NDRG1-223ENST00000522665 MX1P20591 662 aa18.54■□□□□ 0.56
NDRG1-223ENST00000522665 METTL24Q5JXM2 366 aa18.54■□□□□ 0.56
NDRG1-223ENST00000522665 AACSQ86V21 672 aa18.54■□□□□ 0.56
NDRG1-223ENST00000522665 PLEKHM2Q8IWE5 1019 aa18.54■□□□□ 0.56
NDRG1-223ENST00000522665 PUS3Q9BZE2 481 aaKnown RBP18.54■□□□□ 0.56
NDRG1-223ENST00000522665 AKAP2Q9Y2D5 859 aa18.54■□□□□ 0.56
NDRG1-223ENST00000522665 RIPOR2Q9Y4F9 1068 aa18.54■□□□□ 0.56
NDRG1-223ENST00000522665 SALL3Q9BXA9 1300 aa18.53■□□□□ 0.56
NDRG1-223ENST00000522665 KLRG2A4D1S0 409 aaPredicted RBP18.53■□□□□ 0.56
NDRG1-223ENST00000522665 ZNF609O15014 1411 aa18.53■□□□□ 0.56
NDRG1-223ENST00000522665 PDE6BP35913 854 aa18.53■□□□□ 0.56
NDRG1-223ENST00000522665 TNNI3KQ59H18 835 aa18.53■□□□□ 0.56
NDRG1-223ENST00000522665 C16orf71Q8IYS4 520 aaPredicted RBP18.53■□□□□ 0.56
NDRG1-223ENST00000522665 OSBPL3Q9H4L5 887 aa18.53■□□□□ 0.56
NDRG1-223ENST00000522665 FPGT-TNNI3KV9GXZ4 949 aa18.53■□□□□ 0.56
NDRG1-223ENST00000522665 RBM17Q96I25 401 aaKnown RBP18.52■□□□□ 0.56
NDRG1-223ENST00000522665 BSDC1Q9NW68 430 aaPredicted RBP18.52■□□□□ 0.56
NDRG1-223ENST00000522665 STAP2Q9UGK3 403 aa18.52■□□□□ 0.56
NDRG1-223ENST00000522665 TTC41PQ6P2S7 1318 aa18.51■□□□□ 0.55
NDRG1-223ENST00000522665 SPEF2Q9C093 1822 aa18.51■□□□□ 0.55
NDRG1-223ENST00000522665 PDE1AP54750 535 aa18.51■□□□□ 0.55
NDRG1-223ENST00000522665 GRAPQ13588 217 aa18.51■□□□□ 0.55
NDRG1-223ENST00000522665 R3HDM1Q15032 1099 aaKnown RBP18.51■□□□□ 0.55
NDRG1-223ENST00000522665 GRAPLQ8TC17 118 aaPredicted RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms