RNA–Protein interactions for RNA: ENST00000522348.1

SPARC-205, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-205ENST00000522348 AKAP2Q9Y2D5 859 aa11.8□□□□□ -0.52
SPARC-205ENST00000522348 AFDNP55196 1824 aaKnown RBP11.8□□□□□ -0.52
SPARC-205ENST00000522348 ZNF831Q5JPB2 1677 aa11.8□□□□□ -0.52
SPARC-205ENST00000522348 KAT6BQ8WYB5 2073 aa11.8□□□□□ -0.52
SPARC-205ENST00000522348 SH3TC1Q8TE82 1336 aa11.8□□□□□ -0.52
SPARC-205ENST00000522348 CTSWP56202 376 aa11.79□□□□□ -0.52
SPARC-205ENST00000522348 TICAM2Q86XR7 235 aa11.79□□□□□ -0.52
SPARC-205ENST00000522348 CCDC125Q86Z20 511 aa11.79□□□□□ -0.52
SPARC-205ENST00000522348 RUFY2Q8WXA3 655 aa11.79□□□□□ -0.52
SPARC-205ENST00000522348 NARFQ9UHQ1 456 aa11.79□□□□□ -0.52
SPARC-205ENST00000522348 NIP7Q9Y221 180 aaKnown RBP eCLIP11.79□□□□□ -0.52
SPARC-205ENST00000522348 RTCBQ9Y3I0 505 aaKnown RBP11.79□□□□□ -0.52
SPARC-205ENST00000522348 ZPR1O75312 459 aa11.78□□□□□ -0.52
SPARC-205ENST00000522348 SYNE4Q8N205 404 aa11.78□□□□□ -0.52
SPARC-205ENST00000522348 IL27Q8NEV9 243 aa11.78□□□□□ -0.52
SPARC-205ENST00000522348 SNX21Q969T3 373 aa11.78□□□□□ -0.52
SPARC-205ENST00000522348 ZNF594Q96JF6 807 aaPredicted RBP11.78□□□□□ -0.52
SPARC-205ENST00000522348 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.78□□□□□ -0.52
SPARC-205ENST00000522348 UBN2Q6ZU65 1347 aa11.78□□□□□ -0.52
SPARC-205ENST00000522348 MAP4K4O95819 1239 aaPredicted RBP11.77□□□□□ -0.53
SPARC-205ENST00000522348 ITGA6P23229 1130 aa11.77□□□□□ -0.53
SPARC-205ENST00000522348 MCCP23508 829 aa11.77□□□□□ -0.53
SPARC-205ENST00000522348 LRRC24Q50LG9 513 aa11.77□□□□□ -0.53
SPARC-205ENST00000522348 SLC27A3Q5K4L6 730 aa11.77□□□□□ -0.53
SPARC-205ENST00000522348 TRAPPC3LQ5T215 181 aa11.77□□□□□ -0.53
SPARC-205ENST00000522348 LDHAL6AQ6ZMR3 332 aa11.77□□□□□ -0.53
SPARC-205ENST00000522348 NEUROD6Q96NK8 337 aa11.77□□□□□ -0.53
SPARC-205ENST00000522348 RREB1Q92766 1687 aa11.76□□□□□ -0.53
SPARC-205ENST00000522348 GNPATO15228 680 aa11.76□□□□□ -0.53
SPARC-205ENST00000522348 KCNQ4P56696 695 aa11.76□□□□□ -0.53
SPARC-205ENST00000522348 KIAA1211Q6ZU35 1233 aa11.76□□□□□ -0.53
SPARC-205ENST00000522348 PUS3Q9BZE2 481 aaKnown RBP11.76□□□□□ -0.53
SPARC-205ENST00000522348 BOLA2Q9H3K6 86 aa11.76□□□□□ -0.53
SPARC-205ENST00000522348 GREM2Q9H772 168 aa11.76□□□□□ -0.53
SPARC-205ENST00000522348 DIAPH3Q9NSV4 1193 aa11.76□□□□□ -0.53
SPARC-205ENST00000522348 DBNLQ9UJU6 430 aaKnown RBP11.76□□□□□ -0.53
SPARC-205ENST00000522348 RIPOR2Q9Y4F9 1068 aa11.76□□□□□ -0.53
SPARC-205ENST00000522348 SGSM2O43147 1006 aa11.75□□□□□ -0.53
SPARC-205ENST00000522348 TRIM37O94972 964 aa11.75□□□□□ -0.53
SPARC-205ENST00000522348 NTSR2O95665 410 aa11.75□□□□□ -0.53
SPARC-205ENST00000522348 SLC4A3P48751 1232 aa11.75□□□□□ -0.53
SPARC-205ENST00000522348 TIMM10P62072 90 aa11.75□□□□□ -0.53
SPARC-205ENST00000522348 RABEP1Q15276 862 aa11.75□□□□□ -0.53
SPARC-205ENST00000522348 CCDC152Q4G0S7 254 aa11.75□□□□□ -0.53
SPARC-205ENST00000522348 CCDC158Q5M9N0 1113 aa11.75□□□□□ -0.53
SPARC-205ENST00000522348 SLC10A5Q5PT55 438 aa11.75□□□□□ -0.53
SPARC-205ENST00000522348 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.75□□□□□ -0.53
SPARC-205ENST00000522348 CCDC85AQ96PX6 553 aaPredicted RBP11.75□□□□□ -0.53
SPARC-205ENST00000522348 SETDB2Q96T68 719 aa11.75□□□□□ -0.53
SPARC-205ENST00000522348 KIF2CQ99661 725 aa11.75□□□□□ -0.53
SPARC-205ENST00000522348 DBNDD2Q9BQY9 259 aa11.75□□□□□ -0.53
SPARC-205ENST00000522348 TBC1D2Q9BYX2 928 aa11.75□□□□□ -0.53
SPARC-205ENST00000522348 NYXQ9GZU5 481 aa11.75□□□□□ -0.53
SPARC-205ENST00000522348 CNNM1Q9NRU3 951 aa11.75□□□□□ -0.53
SPARC-205ENST00000522348 TLR7Q9NYK1 1049 aaKnown RBP11.75□□□□□ -0.53
SPARC-205ENST00000522348 NHSQ6T4R5 1651 aa11.75□□□□□ -0.53
SPARC-205ENST00000522348 FAM177BA6PVY3 158 aa11.74□□□□□ -0.53
SPARC-205ENST00000522348 HCLS1P14317 486 aaPredicted RBP11.74□□□□□ -0.53
SPARC-205ENST00000522348 ADRA2BP18089 450 aa11.74□□□□□ -0.53
SPARC-205ENST00000522348 GTF2E1P29083 439 aaPredicted RBP11.74□□□□□ -0.53
SPARC-205ENST00000522348 RFC4P35249 363 aa11.74□□□□□ -0.53
SPARC-205ENST00000522348 BAG6P46379 1132 aa11.74□□□□□ -0.53
SPARC-205ENST00000522348 ANAPC15P60006 121 aa11.74□□□□□ -0.53
SPARC-205ENST00000522348 GORABQ5T7V8 394 aa11.74□□□□□ -0.53
SPARC-205ENST00000522348 USPL1Q5W0Q7 1092 aa11.74□□□□□ -0.53
SPARC-205ENST00000522348 HSCBQ8IWL3 235 aa11.74□□□□□ -0.53
SPARC-205ENST00000522348 ARHGEF1Q92888 912 aaKnown RBP11.74□□□□□ -0.53
SPARC-205ENST00000522348 HAUS7Q99871 368 aa11.74□□□□□ -0.53
SPARC-205ENST00000522348 BRWD3Q6RI45 1802 aa11.74□□□□□ -0.53
SPARC-205ENST00000522348 A0A1B0GUL7 405 aa11.73□□□□□ -0.53
SPARC-205ENST00000522348 METTL24Q5JXM2 366 aa11.73□□□□□ -0.53
SPARC-205ENST00000522348 CWC27Q6UX04 472 aaKnown RBP11.73□□□□□ -0.53
SPARC-205ENST00000522348 TPTE2Q6XPS3 522 aa11.73□□□□□ -0.53
SPARC-205ENST00000522348 MROH5Q6ZUA9 1318 aa11.73□□□□□ -0.53
SPARC-205ENST00000522348 RTL9Q8NET4 1388 aa11.73□□□□□ -0.53
SPARC-205ENST00000522348 BCL2L12Q9HB09 334 aa11.73□□□□□ -0.53
SPARC-205ENST00000522348 ANO2Q9NQ90 1003 aa11.73□□□□□ -0.53
SPARC-205ENST00000522348 NUP98P52948 1817 aa11.72□□□□□ -0.53
SPARC-205ENST00000522348 PDE8BO95263 885 aa11.72□□□□□ -0.53
SPARC-205ENST00000522348 APBA3O96018 575 aa11.72□□□□□ -0.53
SPARC-205ENST00000522348 IGHMBP2P38935 993 aaKnown RBP11.72□□□□□ -0.53
SPARC-205ENST00000522348 SF3B3Q15393 1217 aaKnown RBP11.72□□□□□ -0.53
SPARC-205ENST00000522348 LRRFIP1Q32MZ4 808 aaKnown RBP11.72□□□□□ -0.53
SPARC-205ENST00000522348 TBC1D9BQ66K14 1250 aa11.72□□□□□ -0.53
SPARC-205ENST00000522348 MPHOSPH8Q99549 860 aa11.72□□□□□ -0.53
SPARC-205ENST00000522348 FSD1Q9BTV5 496 aa11.72□□□□□ -0.53
SPARC-205ENST00000522348 COL5A3P25940 1745 aaPredicted RBP11.72□□□□□ -0.53
SPARC-205ENST00000522348 RAD50Q92878 1312 aa11.71□□□□□ -0.53
SPARC-205ENST00000522348 IFIT1P09914 478 aaKnown RBP11.71□□□□□ -0.53
SPARC-205ENST00000522348 ATP2B3Q16720 1220 aa11.71□□□□□ -0.53
SPARC-205ENST00000522348 ERFEQ4G0M1 354 aa11.71□□□□□ -0.53
SPARC-205ENST00000522348 TTC39AQ5SRH9 613 aa11.71□□□□□ -0.53
SPARC-205ENST00000522348 BICDL1Q6ZP65 573 aa11.71□□□□□ -0.53
SPARC-205ENST00000522348 IL17RAQ96F46 866 aa11.71□□□□□ -0.53
SPARC-205ENST00000522348 XAGE2Q96GT9 111 aa11.71□□□□□ -0.53
SPARC-205ENST00000522348 ZNF512BQ96KM6 892 aaPredicted RBP11.71□□□□□ -0.53
SPARC-205ENST00000522348 CDC5LQ99459 802 aaKnown RBP11.71□□□□□ -0.53
SPARC-205ENST00000522348 SNRKQ9NRH2 765 aa11.71□□□□□ -0.53
SPARC-205ENST00000522348 LRRC4BQ9NT99 713 aa11.71□□□□□ -0.53
SPARC-205ENST00000522348 BTAF1O14981 1849 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms