RNA–Protein interactions for RNA: ENST00000521941.1

CTNNA1-231, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 224 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-231ENST00000521941 LTBP3Q9NS15 1303 aa10.63□□□□□ -0.71
CTNNA1-231ENST00000521941 HSP90B1P14625 803 aaKnown RBP10.63□□□□□ -0.71
CTNNA1-231ENST00000521941 RTKN2Q8IZC4 609 aa10.63□□□□□ -0.71
CTNNA1-231ENST00000521941 LINS1Q8NG48 757 aa10.63□□□□□ -0.71
CTNNA1-231ENST00000521941 CELF1Q92879 486 aaKnown RBP10.63□□□□□ -0.71
CTNNA1-231ENST00000521941 SEC31BQ9NQW1 1179 aa10.63□□□□□ -0.71
CTNNA1-231ENST00000521941 LRRC37AA6NMS7 1700 aa10.63□□□□□ -0.71
CTNNA1-231ENST00000521941 CDHR2Q9BYE9 1310 aa10.62□□□□□ -0.71
CTNNA1-231ENST00000521941 CTSWP56202 376 aa10.62□□□□□ -0.71
CTNNA1-231ENST00000521941 GCKRQ14397 625 aa10.62□□□□□ -0.71
CTNNA1-231ENST00000521941 SF3B3Q15393 1217 aaKnown RBP10.62□□□□□ -0.71
CTNNA1-231ENST00000521941 CCDC152Q4G0S7 254 aa10.62□□□□□ -0.71
CTNNA1-231ENST00000521941 TRMT2AQ8IZ69 625 aaKnown RBP10.62□□□□□ -0.71
CTNNA1-231ENST00000521941 ATP6V0A2Q9Y487 856 aa10.62□□□□□ -0.71
CTNNA1-231ENST00000521941 SNED1Q8TER0 1413 aa10.61□□□□□ -0.71
CTNNA1-231ENST00000521941 IARSP41252 1262 aaKnown RBP10.61□□□□□ -0.71
CTNNA1-231ENST00000521941 ALDH1L2Q3SY69 923 aa10.61□□□□□ -0.71
CTNNA1-231ENST00000521941 BEND3Q5T5X7 828 aa10.61□□□□□ -0.71
CTNNA1-231ENST00000521941 DPP8Q6V1X1 898 aaPredicted RBP10.61□□□□□ -0.71
CTNNA1-231ENST00000521941 NMRK2Q9NPI5 230 aa10.61□□□□□ -0.71
CTNNA1-231ENST00000521941 CHMP3Q9Y3E7 222 aa10.61□□□□□ -0.71
CTNNA1-231ENST00000521941 PTPRCP08575 1304 aa10.6□□□□□ -0.71
CTNNA1-231ENST00000521941 ZBED9Q6R2W3 1325 aa10.6□□□□□ -0.71
CTNNA1-231ENST00000521941 KDM2BQ8NHM5 1336 aa10.6□□□□□ -0.71
CTNNA1-231ENST00000521941 PPIP5K2O43314 1243 aa10.6□□□□□ -0.71
CTNNA1-231ENST00000521941 BBOX1O75936 387 aa10.6□□□□□ -0.71
CTNNA1-231ENST00000521941 AOC3Q16853 763 aa10.6□□□□□ -0.71
CTNNA1-231ENST00000521941 CC2D2BQ6DHV5 1058 aa10.6□□□□□ -0.71
CTNNA1-231ENST00000521941 MPNDQ8N594 471 aa10.6□□□□□ -0.71
CTNNA1-231ENST00000521941 SRCIN1Q9C0H9 1055 aa10.6□□□□□ -0.71
CTNNA1-231ENST00000521941 GREM2Q9H772 168 aa10.6□□□□□ -0.71
CTNNA1-231ENST00000521941 C9orf78Q9NZ63 289 aaPredicted RBP10.6□□□□□ -0.71
CTNNA1-231ENST00000521941 DUOX1Q9NRD9 1551 aa10.6□□□□□ -0.71
CTNNA1-231ENST00000521941 COL4A5P29400 1685 aa10.6□□□□□ -0.71
CTNNA1-231ENST00000521941 ZC3H4Q9UPT8 1303 aaKnown RBP10.59□□□□□ -0.71
CTNNA1-231ENST00000521941 H7C1W4 665 aa10.59□□□□□ -0.71
CTNNA1-231ENST00000521941 CT47B1P0C2W7 299 aaPredicted RBP10.59□□□□□ -0.71
CTNNA1-231ENST00000521941 CASP7P55210 303 aa10.59□□□□□ -0.71
CTNNA1-231ENST00000521941 FAM161AQ3B820 660 aa10.59□□□□□ -0.71
CTNNA1-231ENST00000521941 ANKRD18AQ8IVF6 992 aa10.59□□□□□ -0.71
CTNNA1-231ENST00000521941 SP8Q8IXZ3 490 aa10.59□□□□□ -0.71
CTNNA1-231ENST00000521941 LARGE2Q8N3Y3 721 aa10.59□□□□□ -0.71
CTNNA1-231ENST00000521941 PSMD1Q99460 953 aa10.59□□□□□ -0.71
CTNNA1-231ENST00000521941 NOB1Q9ULX3 412 aaKnown RBP10.59□□□□□ -0.71
CTNNA1-231ENST00000521941 ZNF541Q9H0D2 1346 aa10.58□□□□□ -0.71
CTNNA1-231ENST00000521941 GRM8O00222 908 aa10.58□□□□□ -0.72
CTNNA1-231ENST00000521941 RARSP54136 660 aaKnown RBP10.58□□□□□ -0.72
CTNNA1-231ENST00000521941 RPS8P62241 208 aaKnown RBP10.58□□□□□ -0.72
CTNNA1-231ENST00000521941 GPSM2P81274 684 aa10.58□□□□□ -0.72
CTNNA1-231ENST00000521941 DPY19L2Q6NUT2 758 aa10.58□□□□□ -0.72
CTNNA1-231ENST00000521941 TMC4Q7Z404 712 aa10.58□□□□□ -0.72
CTNNA1-231ENST00000521941 TTLL11Q8NHH1 800 aa10.58□□□□□ -0.72
CTNNA1-231ENST00000521941 JDP2Q8WYK2 163 aa10.58□□□□□ -0.72
CTNNA1-231ENST00000521941 GPR101Q96P66 508 aaPredicted RBP10.58□□□□□ -0.72
CTNNA1-231ENST00000521941 CDC5LQ99459 802 aaKnown RBP10.58□□□□□ -0.72
CTNNA1-231ENST00000521941 RRAGCQ9HB90 399 aa10.58□□□□□ -0.72
CTNNA1-231ENST00000521941 NSFL1CQ9UNZ2 370 aaKnown RBP10.58□□□□□ -0.72
CTNNA1-231ENST00000521941 GLTPD2A6NH11 291 aa10.57□□□□□ -0.72
CTNNA1-231ENST00000521941 C6orf229H3BNL8 230 aa10.57□□□□□ -0.72
CTNNA1-231ENST00000521941 KIF3CO14782 793 aa10.57□□□□□ -0.72
CTNNA1-231ENST00000521941 RIMBP2O15034 1052 aa10.57□□□□□ -0.72
CTNNA1-231ENST00000521941 ALDH1L1O75891 902 aa10.57□□□□□ -0.72
CTNNA1-231ENST00000521941 DDNO94850 711 aaPredicted RBP10.57□□□□□ -0.72
CTNNA1-231ENST00000521941 ITGA6P23229 1130 aa10.57□□□□□ -0.72
CTNNA1-231ENST00000521941 GRIPAP1Q4V328 841 aa10.57□□□□□ -0.72
CTNNA1-231ENST00000521941 NIM1KQ8IY84 436 aa10.57□□□□□ -0.72
CTNNA1-231ENST00000521941 C16orf71Q8IYS4 520 aaPredicted RBP10.57□□□□□ -0.72
CTNNA1-231ENST00000521941 SUPT20HQ8NEM7 779 aa10.57□□□□□ -0.72
CTNNA1-231ENST00000521941 FRAT1Q92837 279 aaPredicted RBP10.57□□□□□ -0.72
CTNNA1-231ENST00000521941 ANKIB1Q9P2G1 1089 aa10.57□□□□□ -0.72
CTNNA1-231ENST00000521941 LTBP1Q14766 1721 aa10.57□□□□□ -0.72
CTNNA1-231ENST00000521941 WDR90Q96KV7 1748 aa10.57□□□□□ -0.72
CTNNA1-231ENST00000521941 KIF16BQ96L93 1317 aa10.57□□□□□ -0.72
CTNNA1-231ENST00000521941 BCAR3O75815 825 aa10.56□□□□□ -0.72
CTNNA1-231ENST00000521941 UFL1O94874 794 aa10.56□□□□□ -0.72
CTNNA1-231ENST00000521941 IGHMBP2P38935 993 aaKnown RBP10.56□□□□□ -0.72
CTNNA1-231ENST00000521941 EIF6P56537 245 aaKnown RBP10.56□□□□□ -0.72
CTNNA1-231ENST00000521941 EPHA10Q5JZY3 1008 aa10.56□□□□□ -0.72
CTNNA1-231ENST00000521941 SUCLG2Q96I99 432 aa10.56□□□□□ -0.72
CTNNA1-231ENST00000521941 PLA2G12BQ9BX93 195 aa10.56□□□□□ -0.72
CTNNA1-231ENST00000521941 GJA3Q9Y6H8 435 aa10.56□□□□□ -0.72
CTNNA1-231ENST00000521941 A0A1B0GUL6 1792 aa10.55□□□□□ -0.72
CTNNA1-231ENST00000521941 ANKRD18BA2A2Z9 1011 aa10.55□□□□□ -0.72
CTNNA1-231ENST00000521941 NBPF7P0C2Y1 421 aaPredicted RBP10.55□□□□□ -0.72
CTNNA1-231ENST00000521941 C1QTNF8P60827 252 aa10.55□□□□□ -0.72
CTNNA1-231ENST00000521941 TAF7LQ5H9L4 462 aa10.55□□□□□ -0.72
CTNNA1-231ENST00000521941 LMBR1LQ6UX01 489 aa10.55□□□□□ -0.72
CTNNA1-231ENST00000521941 MPHOSPH8Q99549 860 aa10.55□□□□□ -0.72
CTNNA1-231ENST00000521941 API5Q9BZZ5 524 aaKnown RBP10.55□□□□□ -0.72
CTNNA1-231ENST00000521941 TNNQ9UQP3 1299 aa10.55□□□□□ -0.72
CTNNA1-231ENST00000521941 RTL9Q8NET4 1388 aa10.54□□□□□ -0.72
CTNNA1-231ENST00000521941 FOXO4P98177 505 aa10.54□□□□□ -0.72
CTNNA1-231ENST00000521941 KIAA2012Q0VF49 1180 aa10.54□□□□□ -0.72
CTNNA1-231ENST00000521941 WASHC4Q2M389 1173 aa10.54□□□□□ -0.72
CTNNA1-231ENST00000521941 CLUAP1Q96AJ1 413 aa10.54□□□□□ -0.72
CTNNA1-231ENST00000521941 ZNF594Q96JF6 807 aaPredicted RBP10.54□□□□□ -0.72
CTNNA1-231ENST00000521941 RTFDC1Q9BY42 306 aaPredicted RBP10.54□□□□□ -0.72
CTNNA1-231ENST00000521941 BICC1Q9H694 974 aaKnown RBP10.54□□□□□ -0.72
CTNNA1-231ENST00000521941 DBNDD1Q9H9R9 158 aa10.54□□□□□ -0.72
CTNNA1-231ENST00000521941 POLLQ9UGP5 575 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms