RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 NEXNQ0ZGT2 675 aa22.89■■□□□ 1.25
TRAPPC9-211ENST00000521700 C16orf71Q8IYS4 520 aaPredicted RBP22.89■■□□□ 1.25
TRAPPC9-211ENST00000521700 FKBP5Q13451 457 aaPredicted RBP22.88■■□□□ 1.25
TRAPPC9-211ENST00000521700 CWF19L2Q2TBE0 894 aaKnown RBP22.88■■□□□ 1.25
TRAPPC9-211ENST00000521700 CELF1Q92879 486 aaKnown RBP22.88■■□□□ 1.25
TRAPPC9-211ENST00000521700 HSP90B1P14625 803 aaKnown RBP22.87■■□□□ 1.25
TRAPPC9-211ENST00000521700 RBM46Q8TBY0 533 aaKnown RBP22.87■■□□□ 1.25
TRAPPC9-211ENST00000521700 WDR90Q96KV7 1748 aa22.87■■□□□ 1.25
TRAPPC9-211ENST00000521700 NEURL1BA8MQ27 555 aa22.86■■□□□ 1.25
TRAPPC9-211ENST00000521700 FZD9O00144 591 aa22.86■■□□□ 1.25
TRAPPC9-211ENST00000521700 ZNF541Q9H0D2 1346 aa22.85■■□□□ 1.25
TRAPPC9-211ENST00000521700 E9PSI1 815 aa22.85■■□□□ 1.25
TRAPPC9-211ENST00000521700 PDE8AO60658 829 aa22.85■■□□□ 1.25
TRAPPC9-211ENST00000521700 TMC4Q7Z404 712 aa22.85■■□□□ 1.25
TRAPPC9-211ENST00000521700 MPNDQ8N594 471 aa22.85■■□□□ 1.25
TRAPPC9-211ENST00000521700 DNAAF4Q8WXU2 420 aa22.85■■□□□ 1.25
TRAPPC9-211ENST00000521700 JDP2Q8WYK2 163 aa22.85■■□□□ 1.25
TRAPPC9-211ENST00000521700 CDHR2Q9BYE9 1310 aa22.84■■□□□ 1.25
TRAPPC9-211ENST00000521700 COL4A1P02462 1669 aa22.84■■□□□ 1.25
TRAPPC9-211ENST00000521700 COL4A5P29400 1685 aa22.84■■□□□ 1.25
TRAPPC9-211ENST00000521700 HSPA6P17066 643 aa22.84■■□□□ 1.25
TRAPPC9-211ENST00000521700 SLFN5Q08AF3 891 aa22.84■■□□□ 1.25
TRAPPC9-211ENST00000521700 DPP8Q6V1X1 898 aaPredicted RBP22.84■■□□□ 1.25
TRAPPC9-211ENST00000521700 LARGE2Q8N3Y3 721 aa22.84■■□□□ 1.25
TRAPPC9-211ENST00000521700 RTFDC1Q9BY42 306 aaPredicted RBP22.84■■□□□ 1.25
TRAPPC9-211ENST00000521700 RPS8P62241 208 aaKnown RBP22.83■■□□□ 1.25
TRAPPC9-211ENST00000521700 DIEXFQ68CQ4 756 aaKnown RBP22.83■■□□□ 1.25
TRAPPC9-211ENST00000521700 SEC31BQ9NQW1 1179 aa22.83■■□□□ 1.25
TRAPPC9-211ENST00000521700 H7C1W4 665 aa22.82■■□□□ 1.24
TRAPPC9-211ENST00000521700 CCDC152Q4G0S7 254 aa22.82■■□□□ 1.24
TRAPPC9-211ENST00000521700 SUPT20HQ8NEM7 779 aa22.82■■□□□ 1.24
TRAPPC9-211ENST00000521700 CDCA7LQ96GN5 454 aa22.82■■□□□ 1.24
TRAPPC9-211ENST00000521700 VPS33BQ9H267 617 aa22.82■■□□□ 1.24
TRAPPC9-211ENST00000521700 F6X3S4 739 aa22.81■■□□□ 1.24
TRAPPC9-211ENST00000521700 PPIP5K2O43314 1243 aa22.81■■□□□ 1.24
TRAPPC9-211ENST00000521700 FSTL1Q12841 308 aa22.81■■□□□ 1.24
TRAPPC9-211ENST00000521700 GCKRQ14397 625 aa22.81■■□□□ 1.24
TRAPPC9-211ENST00000521700 AOC3Q16853 763 aa22.81■■□□□ 1.24
TRAPPC9-211ENST00000521700 MIER1Q8N108 512 aa22.81■■□□□ 1.24
TRAPPC9-211ENST00000521700 LINS1Q8NG48 757 aa22.81■■□□□ 1.24
TRAPPC9-211ENST00000521700 L3MBTL3Q96JM7 780 aaPredicted RBP22.81■■□□□ 1.24
TRAPPC9-211ENST00000521700 CCDC85AQ96PX6 553 aaPredicted RBP22.81■■□□□ 1.24
TRAPPC9-211ENST00000521700 LRRC37AA6NMS7 1700 aa22.8■■□□□ 1.24
TRAPPC9-211ENST00000521700 UBE3BQ7Z3V4 1068 aa22.8■■□□□ 1.24
TRAPPC9-211ENST00000521700 EIF6P56537 245 aaKnown RBP22.79■■□□□ 1.24
TRAPPC9-211ENST00000521700 NSFL1CQ9UNZ2 370 aaKnown RBP22.79■■□□□ 1.24
TRAPPC9-211ENST00000521700 CTSWP56202 376 aa22.78■■□□□ 1.24
TRAPPC9-211ENST00000521700 BEND3Q5T5X7 828 aa22.78■■□□□ 1.24
TRAPPC9-211ENST00000521700 NIM1KQ8IY84 436 aa22.78■■□□□ 1.24
TRAPPC9-211ENST00000521700 TRMT2AQ8IZ69 625 aaKnown RBP22.78■■□□□ 1.24
TRAPPC9-211ENST00000521700 GPC2Q8N158 579 aa22.78■■□□□ 1.24
TRAPPC9-211ENST00000521700 SMC1BQ8NDV3 1235 aa22.78■■□□□ 1.24
TRAPPC9-211ENST00000521700 TTLL11Q8NHH1 800 aa22.78■■□□□ 1.24
TRAPPC9-211ENST00000521700 DUOX1Q9NRD9 1551 aa22.77■■□□□ 1.24
TRAPPC9-211ENST00000521700 CASP7P55210 303 aa22.77■■□□□ 1.24
TRAPPC9-211ENST00000521700 GPSM2P81274 684 aa22.77■■□□□ 1.24
TRAPPC9-211ENST00000521700 KIAA2012Q0VF49 1180 aa22.77■■□□□ 1.24
TRAPPC9-211ENST00000521700 SCN4AP35499 1836 aa22.76■■□□□ 1.23
TRAPPC9-211ENST00000521700 IQCA1LA6NCM1 817 aa22.76■■□□□ 1.23
TRAPPC9-211ENST00000521700 MRPL50Q8N5N7 158 aaKnown RBP22.76■■□□□ 1.23
TRAPPC9-211ENST00000521700 GJA3Q9Y6H8 435 aa22.76■■□□□ 1.23
TRAPPC9-211ENST00000521700 PLA2G12BQ9BX93 195 aa22.75■■□□□ 1.23
TRAPPC9-211ENST00000521700 TAF1DQ9H5J8 278 aaPredicted RBP22.75■■□□□ 1.23
TRAPPC9-211ENST00000521700 GREM2Q9H772 168 aa22.75■■□□□ 1.23
TRAPPC9-211ENST00000521700 POLLQ9UGP5 575 aa22.75■■□□□ 1.23
TRAPPC9-211ENST00000521700 ZNRF3Q9ULT6 936 aa22.75■■□□□ 1.23
TRAPPC9-211ENST00000521700 MYH3P11055 1940 aa22.74■■□□□ 1.23
TRAPPC9-211ENST00000521700 POTEIP0CG38 1075 aa22.74■■□□□ 1.23
TRAPPC9-211ENST00000521700 POTEJP0CG39 1038 aa22.74■■□□□ 1.23
TRAPPC9-211ENST00000521700 ANKRD18AQ8IVF6 992 aa22.74■■□□□ 1.23
TRAPPC9-211ENST00000521700 C6orf229H3BNL8 230 aa22.73■■□□□ 1.23
TRAPPC9-211ENST00000521700 APLP1P51693 650 aa22.73■■□□□ 1.23
TRAPPC9-211ENST00000521700 SSH1Q8WYL5 1049 aa22.73■■□□□ 1.23
TRAPPC9-211ENST00000521700 HACL1Q9UJ83 578 aa22.73■■□□□ 1.23
TRAPPC9-211ENST00000521700 RTL9Q8NET4 1388 aa22.73■■□□□ 1.23
TRAPPC9-211ENST00000521700 LTBP1Q14766 1721 aa22.72■■□□□ 1.23
TRAPPC9-211ENST00000521700 CXCL9Q07325 125 aa22.72■■□□□ 1.23
TRAPPC9-211ENST00000521700 WASHC4Q2M389 1173 aa22.72■■□□□ 1.23
TRAPPC9-211ENST00000521700 TBC1D16Q8TBP0 767 aa22.72■■□□□ 1.23
TRAPPC9-211ENST00000521700 CDC5LQ99459 802 aaKnown RBP22.72■■□□□ 1.23
TRAPPC9-211ENST00000521700 PODXL2Q9NZ53 605 aa22.72■■□□□ 1.23
TRAPPC9-211ENST00000521700 CSF1RP07333 972 aa22.71■■□□□ 1.23
TRAPPC9-211ENST00000521700 EPHX2P34913 555 aa22.71■■□□□ 1.23
TRAPPC9-211ENST00000521700 SLC4A10Q6U841 1118 aa22.71■■□□□ 1.23
TRAPPC9-211ENST00000521700 RIMBP2O15034 1052 aa22.7■■□□□ 1.22
TRAPPC9-211ENST00000521700 CHADLQ6NUI6 762 aa22.7■■□□□ 1.22
TRAPPC9-211ENST00000521700 GPR101Q96P66 508 aaPredicted RBP22.7■■□□□ 1.22
TRAPPC9-211ENST00000521700 ANKIB1Q9P2G1 1089 aa22.7■■□□□ 1.22
TRAPPC9-211ENST00000521700 ALDH1L1O75891 902 aa22.69■■□□□ 1.22
TRAPPC9-211ENST00000521700 SCNN1DP51172 638 aa22.69■■□□□ 1.22
TRAPPC9-211ENST00000521700 EYA3Q99504 573 aa22.69■■□□□ 1.22
TRAPPC9-211ENST00000521700 BCL2L13Q9BXK5 485 aa22.69■■□□□ 1.22
TRAPPC9-211ENST00000521700 SRCIN1Q9C0H9 1055 aa22.69■■□□□ 1.22
TRAPPC9-211ENST00000521700 YDJCA8MPS7 323 aa22.68■■□□□ 1.22
TRAPPC9-211ENST00000521700 GRM8O00222 908 aa22.68■■□□□ 1.22
TRAPPC9-211ENST00000521700 RAD17O75943 681 aa22.68■■□□□ 1.22
TRAPPC9-211ENST00000521700 FOXO4P98177 505 aa22.68■■□□□ 1.22
TRAPPC9-211ENST00000521700 ALDH1L2Q3SY69 923 aa22.68■■□□□ 1.22
TRAPPC9-211ENST00000521700 EAPPQ56P03 285 aaPredicted RBP22.68■■□□□ 1.22
TRAPPC9-211ENST00000521700 CIAPIN1Q6FI81 312 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms