RNA–Protein interactions for RNA: ENST00000521610.5

HDAC2-212, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-212ENST00000521610 TMX4Q9H1E5 349 aaPredicted RBP13.64□□□□□ -0.23
HDAC2-212ENST00000521610 ABCC4O15439 1325 aa13.64□□□□□ -0.23
HDAC2-212ENST00000521610 GRAPQ13588 217 aa13.63□□□□□ -0.23
HDAC2-212ENST00000521610 CWF19L2Q2TBE0 894 aaKnown RBP13.63□□□□□ -0.23
HDAC2-212ENST00000521610 OLFM4Q6UX06 510 aa13.63□□□□□ -0.23
HDAC2-212ENST00000521610 LINS1Q8NG48 757 aa13.63□□□□□ -0.23
HDAC2-212ENST00000521610 GRAPLQ8TC17 118 aaPredicted RBP13.63□□□□□ -0.23
HDAC2-212ENST00000521610 ATP6V0A2Q9Y487 856 aa13.63□□□□□ -0.23
HDAC2-212ENST00000521610 CDHR2Q9BYE9 1310 aa13.63□□□□□ -0.23
HDAC2-212ENST00000521610 PDE8AO60658 829 aa13.62□□□□□ -0.23
HDAC2-212ENST00000521610 CT47B1P0C2W7 299 aaPredicted RBP13.62□□□□□ -0.23
HDAC2-212ENST00000521610 TMC4Q7Z404 712 aa13.62□□□□□ -0.23
HDAC2-212ENST00000521610 SP8Q8IXZ3 490 aa13.62□□□□□ -0.23
HDAC2-212ENST00000521610 MRPL50Q8N5N7 158 aaKnown RBP13.62□□□□□ -0.23
HDAC2-212ENST00000521610 JARID2Q92833 1246 aaPredicted RBP13.62□□□□□ -0.23
HDAC2-212ENST00000521610 PSMD1Q99460 953 aa13.62□□□□□ -0.23
HDAC2-212ENST00000521610 CCDC88AQ3V6T2 1871 aa13.61□□□□□ -0.23
HDAC2-212ENST00000521610 F6X3S4 739 aa13.61□□□□□ -0.23
HDAC2-212ENST00000521610 H7C1W4 665 aa13.61□□□□□ -0.23
HDAC2-212ENST00000521610 HNRNPUQ00839 825 aaKnown RBP eCLIP13.61□□□□□ -0.23
HDAC2-212ENST00000521610 GCKRQ14397 625 aa13.61□□□□□ -0.23
HDAC2-212ENST00000521610 ALDH1L2Q3SY69 923 aa13.61□□□□□ -0.23
HDAC2-212ENST00000521610 SNED1Q8TER0 1413 aa13.61□□□□□ -0.23
HDAC2-212ENST00000521610 KDM2BQ8NHM5 1336 aa13.61□□□□□ -0.23
HDAC2-212ENST00000521610 CCDC152Q4G0S7 254 aa13.6□□□□□ -0.23
HDAC2-212ENST00000521610 BEND3Q5T5X7 828 aa13.6□□□□□ -0.23
HDAC2-212ENST00000521610 SSH1Q8WYL5 1049 aa13.6□□□□□ -0.23
HDAC2-212ENST00000521610 ZNF277Q9NRM2 450 aaPredicted RBP13.6□□□□□ -0.23
HDAC2-212ENST00000521610 DICER1Q9UPY3 1922 aaKnown RBP13.59□□□□□ -0.23
HDAC2-212ENST00000521610 GLTPD2A6NH11 291 aa13.59□□□□□ -0.23
HDAC2-212ENST00000521610 IARSP41252 1262 aaKnown RBP13.59□□□□□ -0.23
HDAC2-212ENST00000521610 DPY19L2Q6NUT2 758 aa13.59□□□□□ -0.23
HDAC2-212ENST00000521610 UBE3BQ7Z3V4 1068 aa13.59□□□□□ -0.23
HDAC2-212ENST00000521610 CELF1Q92879 486 aaKnown RBP13.59□□□□□ -0.23
HDAC2-212ENST00000521610 PTPRCP08575 1304 aa13.59□□□□□ -0.23
HDAC2-212ENST00000521610 TIAM2Q8IVF5 1701 aa13.59□□□□□ -0.23
HDAC2-212ENST00000521610 CTSWP56202 376 aa13.58□□□□□ -0.24
HDAC2-212ENST00000521610 RPS8P62241 208 aaKnown RBP13.58□□□□□ -0.24
HDAC2-212ENST00000521610 MPNDQ8N594 471 aa13.58□□□□□ -0.24
HDAC2-212ENST00000521610 SUPT20HQ8NEM7 779 aa13.58□□□□□ -0.24
HDAC2-212ENST00000521610 PLA2G12BQ9BX93 195 aa13.58□□□□□ -0.24
HDAC2-212ENST00000521610 VPS33BQ9H267 617 aa13.58□□□□□ -0.24
HDAC2-212ENST00000521610 KIF3CO14782 793 aa13.57□□□□□ -0.24
HDAC2-212ENST00000521610 ALDH1L1O75891 902 aa13.57□□□□□ -0.24
HDAC2-212ENST00000521610 CASP7P55210 303 aa13.57□□□□□ -0.24
HDAC2-212ENST00000521610 SLC4A10Q6U841 1118 aa13.57□□□□□ -0.24
HDAC2-212ENST00000521610 DPP8Q6V1X1 898 aaPredicted RBP13.57□□□□□ -0.24
HDAC2-212ENST00000521610 SLC51AQ86UW1 340 aa13.57□□□□□ -0.24
HDAC2-212ENST00000521610 TTLL11Q8NHH1 800 aa13.57□□□□□ -0.24
HDAC2-212ENST00000521610 BCL2L13Q9BXK5 485 aa13.57□□□□□ -0.24
HDAC2-212ENST00000521610 RTFDC1Q9BY42 306 aaPredicted RBP13.57□□□□□ -0.24
HDAC2-212ENST00000521610 SRCIN1Q9C0H9 1055 aa13.57□□□□□ -0.24
HDAC2-212ENST00000521610 NMRK2Q9NPI5 230 aa13.57□□□□□ -0.24
HDAC2-212ENST00000521610 SEC31BQ9NQW1 1179 aa13.57□□□□□ -0.24
HDAC2-212ENST00000521610 SMC4Q9NTJ3 1288 aa13.57□□□□□ -0.24
HDAC2-212ENST00000521610 TAF1P21675 1872 aa13.57□□□□□ -0.24
HDAC2-212ENST00000521610 JDP2Q8WYK2 163 aa13.56□□□□□ -0.24
HDAC2-212ENST00000521610 CCDC85AQ96PX6 553 aaPredicted RBP13.56□□□□□ -0.24
HDAC2-212ENST00000521610 RRAGCQ9HB90 399 aa13.56□□□□□ -0.24
HDAC2-212ENST00000521610 BRPF1P55201 1214 aaPredicted RBP13.55□□□□□ -0.24
HDAC2-212ENST00000521610 C1QTNF8P60827 252 aa13.55□□□□□ -0.24
HDAC2-212ENST00000521610 ANKRD18AQ8IVF6 992 aa13.55□□□□□ -0.24
HDAC2-212ENST00000521610 LARGE2Q8N3Y3 721 aa13.55□□□□□ -0.24
HDAC2-212ENST00000521610 CDC5LQ99459 802 aaKnown RBP13.55□□□□□ -0.24
HDAC2-212ENST00000521610 C9orf78Q9NZ63 289 aaPredicted RBP13.55□□□□□ -0.24
HDAC2-212ENST00000521610 RTL9Q8NET4 1388 aa13.55□□□□□ -0.24
HDAC2-212ENST00000521610 LRRC37AA6NMS7 1700 aa13.54□□□□□ -0.24
HDAC2-212ENST00000521610 FZD9O00144 591 aa13.54□□□□□ -0.24
HDAC2-212ENST00000521610 GRM8O00222 908 aa13.54□□□□□ -0.24
HDAC2-212ENST00000521610 CSF1RP07333 972 aa13.54□□□□□ -0.24
HDAC2-212ENST00000521610 RARSP54136 660 aaKnown RBP13.54□□□□□ -0.24
HDAC2-212ENST00000521610 GREM2Q9H772 168 aa13.54□□□□□ -0.24
HDAC2-212ENST00000521610 NSFL1CQ9UNZ2 370 aaKnown RBP13.54□□□□□ -0.24
HDAC2-212ENST00000521610 COL4A1P02462 1669 aa13.53□□□□□ -0.24
HDAC2-212ENST00000521610 MYH3P11055 1940 aa13.53□□□□□ -0.24
HDAC2-212ENST00000521610 PPIP5K2O43314 1243 aa13.53□□□□□ -0.24
HDAC2-212ENST00000521610 DDNO94850 711 aaPredicted RBP13.53□□□□□ -0.24
HDAC2-212ENST00000521610 VEGFAP15692 232 aaPredicted RBP13.53□□□□□ -0.24
HDAC2-212ENST00000521610 AOC3Q16853 763 aa13.53□□□□□ -0.24
HDAC2-212ENST00000521610 C16orf71Q8IYS4 520 aaPredicted RBP13.53□□□□□ -0.24
HDAC2-212ENST00000521610 ZBED9Q6R2W3 1325 aa13.53□□□□□ -0.24
HDAC2-212ENST00000521610 TOMM70O94826 608 aa13.52□□□□□ -0.25
HDAC2-212ENST00000521610 EIF6P56537 245 aaKnown RBP13.52□□□□□ -0.25
HDAC2-212ENST00000521610 GPSM2P81274 684 aa13.52□□□□□ -0.25
HDAC2-212ENST00000521610 FOXO4P98177 505 aa13.52□□□□□ -0.25
HDAC2-212ENST00000521610 KIAA2012Q0VF49 1180 aa13.52□□□□□ -0.25
HDAC2-212ENST00000521610 NIM1KQ8IY84 436 aa13.52□□□□□ -0.25
HDAC2-212ENST00000521610 PODXL2Q9NZ53 605 aa13.52□□□□□ -0.25
HDAC2-212ENST00000521610 NOB1Q9ULX3 412 aaKnown RBP13.52□□□□□ -0.25
HDAC2-212ENST00000521610 WDR90Q96KV7 1748 aa13.52□□□□□ -0.25
HDAC2-212ENST00000521610 UTYO14607 1347 aa13.51□□□□□ -0.25
HDAC2-212ENST00000521610 ZNF541Q9H0D2 1346 aa13.51□□□□□ -0.25
HDAC2-212ENST00000521610 C6orf229H3BNL8 230 aa13.51□□□□□ -0.25
HDAC2-212ENST00000521610 ITGA6P23229 1130 aa13.51□□□□□ -0.25
HDAC2-212ENST00000521610 IGHMBP2P38935 993 aaKnown RBP13.51□□□□□ -0.25
HDAC2-212ENST00000521610 WASHC4Q2M389 1173 aa13.51□□□□□ -0.25
HDAC2-212ENST00000521610 EYA3Q99504 573 aa13.51□□□□□ -0.25
HDAC2-212ENST00000521610 API5Q9BZZ5 524 aaKnown RBP13.51□□□□□ -0.25
HDAC2-212ENST00000521610 BSDC1Q9NW68 430 aaPredicted RBP13.51□□□□□ -0.25
HDAC2-212ENST00000521610 COL4A5P29400 1685 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms