RNA–Protein interactions for RNA: ENST00000521403.1

CERNA3-201, Transcript of competing endogenous lncRNA 3 for miR-645, humanhuman

TSL 3 BASIC

Gene CERNA3, Length 557 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CERNA3-201ENST00000521403 RIC3Q7Z5B4 369 aa25.58■■□□□ 1.69
CERNA3-201ENST00000521403 CNTROBQ8N137 903 aa25.58■■□□□ 1.69
CERNA3-201ENST00000521403 RTFDC1Q9BY42 306 aaPredicted RBP25.58■■□□□ 1.69
CERNA3-201ENST00000521403 VPS33BQ9H267 617 aa25.58■■□□□ 1.69
CERNA3-201ENST00000521403 EPS15P42566 896 aa25.57■■□□□ 1.68
CERNA3-201ENST00000521403 GOLGA2Q08379 1002 aa25.57■■□□□ 1.68
CERNA3-201ENST00000521403 TAF1P21675 1872 aa25.57■■□□□ 1.68
CERNA3-201ENST00000521403 TMEM88BA6NKF7 163 aa25.56■■□□□ 1.68
CERNA3-201ENST00000521403 ZNRF3Q9ULT6 936 aa25.56■■□□□ 1.68
CERNA3-201ENST00000521403 LTBP1Q14766 1721 aa25.56■■□□□ 1.68
CERNA3-201ENST00000521403 DDX60Q8IY21 1712 aaKnown RBP25.56■■□□□ 1.68
CERNA3-201ENST00000521403 COL13A1Q5TAT6 717 aaPredicted RBP25.55■■□□□ 1.68
CERNA3-201ENST00000521403 C8orf58Q8NAV2 365 aa25.55■■□□□ 1.68
CERNA3-201ENST00000521403 PHAXQ9H814 394 aaKnown RBP25.55■■□□□ 1.68
CERNA3-201ENST00000521403 CCDC184Q52MB2 194 aa25.54■■□□□ 1.68
CERNA3-201ENST00000521403 TMC4Q7Z404 712 aa25.54■■□□□ 1.68
CERNA3-201ENST00000521403 CNTNAP1P78357 1384 aa25.54■■□□□ 1.68
CERNA3-201ENST00000521403 IRS4O14654 1257 aaPredicted RBP25.53■■□□□ 1.68
CERNA3-201ENST00000521403 CXCL9Q07325 125 aa25.53■■□□□ 1.68
CERNA3-201ENST00000521403 KIAA2012Q0VF49 1180 aa25.53■■□□□ 1.68
CERNA3-201ENST00000521403 SF3B3Q15393 1217 aaKnown RBP25.53■■□□□ 1.68
CERNA3-201ENST00000521403 TRIM28Q13263 835 aaKnown RBP25.52■■□□□ 1.68
CERNA3-201ENST00000521403 CELF1Q92879 486 aaKnown RBP25.52■■□□□ 1.68
CERNA3-201ENST00000521403 MYD88Q99836 296 aa25.52■■□□□ 1.68
CERNA3-201ENST00000521403 USP50Q70EL3 339 aaPredicted RBP25.51■■□□□ 1.67
CERNA3-201ENST00000521403 CCDC30Q5VVM6 783 aa25.5■■□□□ 1.67
CERNA3-201ENST00000521403 ZBTB38Q8NAP3 1195 aaPredicted RBP25.5■■□□□ 1.67
CERNA3-201ENST00000521403 GPRC5DQ9NZD1 345 aa25.5■■□□□ 1.67
CERNA3-201ENST00000521403 NSFL1CQ9UNZ2 370 aaKnown RBP25.5■■□□□ 1.67
CERNA3-201ENST00000521403 RAD17O75943 681 aa25.49■■□□□ 1.67
CERNA3-201ENST00000521403 GMPSP49915 693 aaPredicted RBP25.49■■□□□ 1.67
CERNA3-201ENST00000521403 CIAPIN1Q6FI81 312 aa25.49■■□□□ 1.67
CERNA3-201ENST00000521403 DDX58O95786 925 aaKnown RBP25.48■■□□□ 1.67
CERNA3-201ENST00000521403 TSPYL6Q8N831 410 aa25.48■■□□□ 1.67
CERNA3-201ENST00000521403 TSR2Q969E8 191 aaKnown RBP25.48■■□□□ 1.67
CERNA3-201ENST00000521403 BCL2L13Q9BXK5 485 aa25.48■■□□□ 1.67
CERNA3-201ENST00000521403 CHMP4AQ9BY43 222 aa25.48■■□□□ 1.67
CERNA3-201ENST00000521403 ADARB2Q9NS39 739 aaKnown RBP25.48■■□□□ 1.67
CERNA3-201ENST00000521403 LRRC37AA6NMS7 1700 aa25.48■■□□□ 1.67
CERNA3-201ENST00000521403 DUOX1Q9NRD9 1551 aa25.48■■□□□ 1.67
CERNA3-201ENST00000521403 ABT1Q9ULW3 272 aaKnown RBP25.47■■□□□ 1.67
CERNA3-201ENST00000521403 HSP90B1P14625 803 aaKnown RBP25.46■■□□□ 1.67
CERNA3-201ENST00000521403 VEGFBP49765 207 aa25.46■■□□□ 1.67
CERNA3-201ENST00000521403 TNIP1Q15025 636 aa25.46■■□□□ 1.67
CERNA3-201ENST00000521403 WASHC4Q2M389 1173 aa25.46■■□□□ 1.67
CERNA3-201ENST00000521403 CCDC191Q8NCU4 936 aa25.46■■□□□ 1.67
CERNA3-201ENST00000521403 COL4A1P02462 1669 aa25.45■■□□□ 1.67
CERNA3-201ENST00000521403 C6orf229H3BNL8 230 aa25.45■■□□□ 1.66
CERNA3-201ENST00000521403 RPS8P62241 208 aaKnown RBP25.45■■□□□ 1.66
CERNA3-201ENST00000521403 GPSM2P81274 684 aa25.45■■□□□ 1.66
CERNA3-201ENST00000521403 TNS4Q8IZW8 715 aa25.45■■□□□ 1.66
CERNA3-201ENST00000521403 JARID2Q92833 1246 aaPredicted RBP25.45■■□□□ 1.66
CERNA3-201ENST00000521403 CWC25Q9NXE8 425 aaPredicted RBP25.45■■□□□ 1.66
CERNA3-201ENST00000521403 YDJCA8MPS7 323 aa25.44■■□□□ 1.66
CERNA3-201ENST00000521403 RIMBP2O15034 1052 aa25.44■■□□□ 1.66
CERNA3-201ENST00000521403 ZEB1P37275 1124 aaPredicted RBP25.44■■□□□ 1.66
CERNA3-201ENST00000521403 FMR1Q06787 632 aaKnown RBP eCLIP25.44■■□□□ 1.66
CERNA3-201ENST00000521403 METTL22Q9BUU2 404 aaPredicted RBP25.44■■□□□ 1.66
CERNA3-201ENST00000521403 MAP3K2Q9Y2U5 619 aa25.44■■□□□ 1.66
CERNA3-201ENST00000521403 TRAF5O00463 557 aa25.43■■□□□ 1.66
CERNA3-201ENST00000521403 CCDC27Q2M243 656 aa25.43■■□□□ 1.66
CERNA3-201ENST00000521403 DEFB115Q30KQ5 88 aa25.43■■□□□ 1.66
CERNA3-201ENST00000521403 WWC1Q8IX03 1113 aa25.43■■□□□ 1.66
CERNA3-201ENST00000521403 DBNDD1Q9H9R9 158 aa25.43■■□□□ 1.66
CERNA3-201ENST00000521403 MRS2Q9HD23 443 aa25.43■■□□□ 1.66
CERNA3-201ENST00000521403 POLLQ9UGP5 575 aa25.43■■□□□ 1.66
CERNA3-201ENST00000521403 CDHR2Q9BYE9 1310 aa25.42■■□□□ 1.66
CERNA3-201ENST00000521403 RASSF10A6NK89 507 aa25.42■■□□□ 1.66
CERNA3-201ENST00000521403 PCCAP05165 728 aaPredicted RBP25.42■■□□□ 1.66
CERNA3-201ENST00000521403 CCDC85AQ96PX6 553 aaPredicted RBP25.42■■□□□ 1.66
CERNA3-201ENST00000521403 STK31Q9BXU1 1019 aa25.42■■□□□ 1.66
CERNA3-201ENST00000521403 SEC31BQ9NQW1 1179 aa25.42■■□□□ 1.66
CERNA3-201ENST00000521403 CCDC152Q4G0S7 254 aa25.41■■□□□ 1.66
CERNA3-201ENST00000521403 PI4KAP2A4QPH2 592 aa25.4■■□□□ 1.66
CERNA3-201ENST00000521403 ANP32CO43423 234 aa25.4■■□□□ 1.66
CERNA3-201ENST00000521403 PDE8AO60658 829 aa25.4■■□□□ 1.66
CERNA3-201ENST00000521403 KSR2Q6VAB6 950 aa25.4■■□□□ 1.66
CERNA3-201ENST00000521403 PI4KAP1Q8N8J0 262 aa25.4■■□□□ 1.66
CERNA3-201ENST00000521403 AIDAQ96BJ3 306 aa25.4■■□□□ 1.66
CERNA3-201ENST00000521403 GPR101Q96P66 508 aaPredicted RBP25.4■■□□□ 1.66
CERNA3-201ENST00000521403 EYA3Q99504 573 aa25.4■■□□□ 1.66
CERNA3-201ENST00000521403 DOK7Q18PE1 504 aa25.39■■□□□ 1.66
CERNA3-201ENST00000521403 TWISTNBQ3B726 338 aaPredicted RBP25.39■■□□□ 1.66
CERNA3-201ENST00000521403 PAXIP1Q6ZW49 1069 aaPredicted RBP25.39■■□□□ 1.66
CERNA3-201ENST00000521403 TBC1D16Q8TBP0 767 aa25.39■■□□□ 1.66
CERNA3-201ENST00000521403 CNOT7Q9UIV1 285 aaKnown RBP25.39■■□□□ 1.66
CERNA3-201ENST00000521403 ZBTB12Q9Y330 459 aaPredicted RBP25.39■■□□□ 1.66
CERNA3-201ENST00000521403 SHTN1A0MZ66 631 aa25.38■■□□□ 1.65
CERNA3-201ENST00000521403 H7C1D1 291 aa25.38■■□□□ 1.65
CERNA3-201ENST00000521403 PSMD14O00487 310 aa25.38■■□□□ 1.65
CERNA3-201ENST00000521403 FOXN1O15353 648 aa25.38■■□□□ 1.65
CERNA3-201ENST00000521403 MICALL2Q8IY33 904 aa25.38■■□□□ 1.65
CERNA3-201ENST00000521403 TRPM4Q8TD43 1214 aa25.38■■□□□ 1.65
CERNA3-201ENST00000521403 ANKIB1Q9P2G1 1089 aa25.38■■□□□ 1.65
CERNA3-201ENST00000521403 WDR33Q9C0J8 1336 aaKnown RBP25.37■■□□□ 1.65
CERNA3-201ENST00000521403 ECE2O60344 883 aa25.37■■□□□ 1.65
CERNA3-201ENST00000521403 CAPN15O75808 1086 aa25.37■■□□□ 1.65
CERNA3-201ENST00000521403 NEXNQ0ZGT2 675 aa25.37■■□□□ 1.65
CERNA3-201ENST00000521403 CST9Q5W186 159 aa25.37■■□□□ 1.65
CERNA3-201ENST00000521403 UFL1O94874 794 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms