RNA–Protein interactions for RNA: ENST00000521001.1

TNIP1-209, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 4

Gene TNIP1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-209ENST00000521001 PIM2Q9P1W9 311 aa12.77□□□□□ -0.37
TNIP1-209ENST00000521001 RCAN3Q9UKA8 241 aa12.77□□□□□ -0.37
TNIP1-209ENST00000521001 KIF16BQ96L93 1317 aa12.77□□□□□ -0.37
TNIP1-209ENST00000521001 PSME4Q14997 1843 aa12.76□□□□□ -0.37
TNIP1-209ENST00000521001 SCN9AQ15858 1988 aa12.76□□□□□ -0.37
TNIP1-209ENST00000521001 H0YIN7 160 aa12.76□□□□□ -0.37
TNIP1-209ENST00000521001 GRM8O00222 908 aa12.76□□□□□ -0.37
TNIP1-209ENST00000521001 PLIN1O60240 522 aa12.76□□□□□ -0.37
TNIP1-209ENST00000521001 NPR1P16066 1061 aa12.76□□□□□ -0.37
TNIP1-209ENST00000521001 PRPF40BQ6NWY9 871 aaKnown RBP12.76□□□□□ -0.37
TNIP1-209ENST00000521001 TMEM57Q8N5G2 664 aa12.76□□□□□ -0.37
TNIP1-209ENST00000521001 RTL9Q8NET4 1388 aa12.76□□□□□ -0.37
TNIP1-209ENST00000521001 NFKBIEO00221 500 aa12.75□□□□□ -0.37
TNIP1-209ENST00000521001 PDE8AO60658 829 aa12.75□□□□□ -0.37
TNIP1-209ENST00000521001 NEXNQ0ZGT2 675 aa12.75□□□□□ -0.37
TNIP1-209ENST00000521001 RABL6Q3YEC7 729 aaPredicted RBP12.75□□□□□ -0.37
TNIP1-209ENST00000521001 ZKSCAN2Q63HK3 967 aa12.75□□□□□ -0.37
TNIP1-209ENST00000521001 CLUAP1Q96AJ1 413 aa12.75□□□□□ -0.37
TNIP1-209ENST00000521001 CRAMP1Q96RY5 1269 aa12.75□□□□□ -0.37
TNIP1-209ENST00000521001 MEIS3Q99687 375 aa12.75□□□□□ -0.37
TNIP1-209ENST00000521001 API5Q9BZZ5 524 aaKnown RBP12.75□□□□□ -0.37
TNIP1-209ENST00000521001 GREM2Q9H772 168 aa12.75□□□□□ -0.37
TNIP1-209ENST00000521001 BCS1LQ9Y276 419 aa12.75□□□□□ -0.37
TNIP1-209ENST00000521001 WTIPA6NIX2 430 aaPredicted RBP12.74□□□□□ -0.37
TNIP1-209ENST00000521001 CTSWP56202 376 aa12.74□□□□□ -0.37
TNIP1-209ENST00000521001 TTLL6Q8N841 843 aa12.74□□□□□ -0.37
TNIP1-209ENST00000521001 FRAT1Q92837 279 aaPredicted RBP12.74□□□□□ -0.37
TNIP1-209ENST00000521001 ZNF622Q969S3 477 aaKnown RBP eCLIP12.74□□□□□ -0.377e-7■■□□□ 13.5
TNIP1-209ENST00000521001 NLRP3Q96P20 1036 aa12.74□□□□□ -0.37
TNIP1-209ENST00000521001 PDZRN3Q9UPQ7 1066 aa12.74□□□□□ -0.37
TNIP1-209ENST00000521001 C21orf2O43822 256 aa12.73□□□□□ -0.37
TNIP1-209ENST00000521001 GTF2E1P29083 439 aaPredicted RBP12.73□□□□□ -0.37
TNIP1-209ENST00000521001 DALRD3Q5D0E6 543 aaKnown RBP12.73□□□□□ -0.37
TNIP1-209ENST00000521001 PANK1Q8TE04 598 aa12.73□□□□□ -0.37
TNIP1-209ENST00000521001 CCDC85AQ96PX6 553 aaPredicted RBP12.73□□□□□ -0.37
TNIP1-209ENST00000521001 RFX5P48382 616 aaPredicted RBP12.72□□□□□ -0.37
TNIP1-209ENST00000521001 RASSF7Q02833 373 aa12.72□□□□□ -0.37
TNIP1-209ENST00000521001 GRAPQ13588 217 aa12.72□□□□□ -0.37
TNIP1-209ENST00000521001 FAM161AQ3B820 660 aa12.72□□□□□ -0.37
TNIP1-209ENST00000521001 GRAPLQ8TC17 118 aaPredicted RBP12.72□□□□□ -0.37
TNIP1-209ENST00000521001 CNKSR1Q969H4 720 aa12.72□□□□□ -0.37
TNIP1-209ENST00000521001 BICC1Q9H694 974 aaKnown RBP12.72□□□□□ -0.37
TNIP1-209ENST00000521001 ZBTB7BO15156 539 aaPredicted RBP12.71□□□□□ -0.37
TNIP1-209ENST00000521001 CCT4P50991 539 aaKnown RBP12.71□□□□□ -0.37
TNIP1-209ENST00000521001 GPR162Q16538 588 aa12.71□□□□□ -0.37
TNIP1-209ENST00000521001 ZNF219Q9P2Y4 722 aaPredicted RBP12.71□□□□□ -0.37
TNIP1-209ENST00000521001 ARAP2Q8WZ64 1704 aa12.71□□□□□ -0.38
TNIP1-209ENST00000521001 IRS2Q9Y4H2 1338 aa12.7□□□□□ -0.38
TNIP1-209ENST00000521001 LMBR1LQ6UX01 489 aa12.7□□□□□ -0.38
TNIP1-209ENST00000521001 RBM17Q96I25 401 aaKnown RBP12.7□□□□□ -0.38
TNIP1-209ENST00000521001 ATP6V0A2Q9Y487 856 aa12.7□□□□□ -0.38
TNIP1-209ENST00000521001 LTBP3Q9NS15 1303 aa12.69□□□□□ -0.38
TNIP1-209ENST00000521001 PPEF1O14829 653 aaPredicted RBP12.69□□□□□ -0.38
TNIP1-209ENST00000521001 NPHP1O15259 732 aa12.69□□□□□ -0.38
TNIP1-209ENST00000521001 IPO8O15397 1037 aaKnown RBP12.69□□□□□ -0.38
TNIP1-209ENST00000521001 ALDH1B1P30837 517 aa12.69□□□□□ -0.38
TNIP1-209ENST00000521001 DZIP1LQ8IYY4 767 aaKnown RBP12.69□□□□□ -0.38
TNIP1-209ENST00000521001 PELP1Q8IZL8 1130 aaKnown RBP12.69□□□□□ -0.38
TNIP1-209ENST00000521001 RPGRQ92834 1020 aaKnown RBP12.69□□□□□ -0.38
TNIP1-209ENST00000521001 ZNF594Q96JF6 807 aaPredicted RBP12.69□□□□□ -0.38
TNIP1-209ENST00000521001 C9orf78Q9NZ63 289 aaPredicted RBP12.69□□□□□ -0.38
TNIP1-209ENST00000521001 ITGA6P23229 1130 aa12.68□□□□□ -0.38
TNIP1-209ENST00000521001 RPS8P62241 208 aaKnown RBP12.68□□□□□ -0.38
TNIP1-209ENST00000521001 SP8Q8IXZ3 490 aa12.68□□□□□ -0.38
TNIP1-209ENST00000521001 PUS3Q9BZE2 481 aaKnown RBP12.68□□□□□ -0.38
TNIP1-209ENST00000521001 LRRFIP2Q9Y608 721 aaKnown RBP12.68□□□□□ -0.38
TNIP1-209ENST00000521001 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.68□□□□□ -0.38
TNIP1-209ENST00000521001 BBOX1O75936 387 aa12.67□□□□□ -0.38
TNIP1-209ENST00000521001 GPSM2P81274 684 aa12.67□□□□□ -0.38
TNIP1-209ENST00000521001 CCDC152Q4G0S7 254 aa12.67□□□□□ -0.38
TNIP1-209ENST00000521001 DDX46Q7L014 1031 aaKnown RBP12.67□□□□□ -0.38
TNIP1-209ENST00000521001 KLHDC4Q8TBB5 520 aa12.67□□□□□ -0.38
TNIP1-209ENST00000521001 RTFDC1Q9BY42 306 aaPredicted RBP12.67□□□□□ -0.38
TNIP1-209ENST00000521001 GRIN3BO60391 1043 aa12.66□□□□□ -0.38
TNIP1-209ENST00000521001 RRP1P56182 461 aaKnown RBP12.66□□□□□ -0.38
TNIP1-209ENST00000521001 MTX1Q13505 466 aa12.66□□□□□ -0.38
TNIP1-209ENST00000521001 MVPQ14764 893 aaKnown RBP12.66□□□□□ -0.38
TNIP1-209ENST00000521001 POLLQ9UGP5 575 aa12.66□□□□□ -0.38
TNIP1-209ENST00000521001 MINPP1Q9UNW1 487 aa12.66□□□□□ -0.38
TNIP1-209ENST00000521001 COG6Q9Y2V7 657 aa12.66□□□□□ -0.38
TNIP1-209ENST00000521001 MYH13Q9UKX3 1938 aa12.66□□□□□ -0.38
TNIP1-209ENST00000521001 PNMA6EA0A0J9YXQ4 647 aa12.65□□□□□ -0.38
TNIP1-209ENST00000521001 SNAP23O00161 211 aa12.65□□□□□ -0.38
TNIP1-209ENST00000521001 PTPN12Q05209 780 aaKnown RBP12.65□□□□□ -0.38
TNIP1-209ENST00000521001 ARHGAP27Q6ZUM4 889 aa12.65□□□□□ -0.38
TNIP1-209ENST00000521001 SIRT2Q8IXJ6 389 aa12.65□□□□□ -0.38
TNIP1-209ENST00000521001 VGLL2Q8N8G2 317 aa12.65□□□□□ -0.38
TNIP1-209ENST00000521001 GPR101Q96P66 508 aaPredicted RBP12.65□□□□□ -0.38
TNIP1-209ENST00000521001 PSMD1Q99460 953 aa12.65□□□□□ -0.38
TNIP1-209ENST00000521001 C1orf115Q9H7X2 142 aa12.65□□□□□ -0.38
TNIP1-209ENST00000521001 PODXL2Q9NZ53 605 aa12.65□□□□□ -0.38
TNIP1-209ENST00000521001 MYO5AQ9Y4I1 1855 aaKnown RBP12.64□□□□□ -0.39
TNIP1-209ENST00000521001 KLRK1P26718 216 aa12.64□□□□□ -0.39
TNIP1-209ENST00000521001 FKBP4Q02790 459 aaKnown RBP eCLIP12.64□□□□□ -0.39
TNIP1-209ENST00000521001 PDE3AQ14432 1141 aa12.64□□□□□ -0.39
TNIP1-209ENST00000521001 LRRC24Q50LG9 513 aa12.64□□□□□ -0.39
TNIP1-209ENST00000521001 CCDC93Q567U6 631 aa12.64□□□□□ -0.39
TNIP1-209ENST00000521001 ATG9AQ7Z3C6 839 aa12.64□□□□□ -0.39
TNIP1-209ENST00000521001 TXNRD3Q86VQ6 643 aa12.64□□□□□ -0.39
TNIP1-209ENST00000521001 ZNF277Q9NRM2 450 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms