RNA–Protein interactions for RNA: ENST00000520532.5

TRAPPC9-207, Transcript of trafficking protein particle complex 9, humanhuman

TSL 5

Gene TRAPPC9, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-207ENST00000520532 MRPL50Q8N5N7 158 aaKnown RBP9.42□□□□□ -0.9
TRAPPC9-207ENST00000520532 GRAPLQ8TC17 118 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC9-207ENST00000520532 FAM89AQ96GI7 184 aa9.42□□□□□ -0.9
TRAPPC9-207ENST00000520532 VPS33BQ9H267 617 aa9.42□□□□□ -0.9
TRAPPC9-207ENST00000520532 SMC4Q9NTJ3 1288 aa9.42□□□□□ -0.9
TRAPPC9-207ENST00000520532 ARAP2Q8WZ64 1704 aa9.42□□□□□ -0.9
TRAPPC9-207ENST00000520532 UTYO14607 1347 aa9.41□□□□□ -0.9
TRAPPC9-207ENST00000520532 ZNF646O15015 1829 aaPredicted RBP9.41□□□□□ -0.9
TRAPPC9-207ENST00000520532 C21orf2O43822 256 aa9.41□□□□□ -0.9
TRAPPC9-207ENST00000520532 BBOX1O75936 387 aa9.41□□□□□ -0.9
TRAPPC9-207ENST00000520532 CTSWP56202 376 aa9.41□□□□□ -0.9
TRAPPC9-207ENST00000520532 FKBP4Q02790 459 aaKnown RBP eCLIP9.41□□□□□ -0.9
TRAPPC9-207ENST00000520532 CWF19L2Q2TBE0 894 aaKnown RBP9.41□□□□□ -0.9
TRAPPC9-207ENST00000520532 BEND3Q5T5X7 828 aa9.41□□□□□ -0.9
TRAPPC9-207ENST00000520532 ARHGAP27Q6ZUM4 889 aa9.41□□□□□ -0.9
TRAPPC9-207ENST00000520532 SSH1Q8WYL5 1049 aa9.41□□□□□ -0.9
TRAPPC9-207ENST00000520532 ARHGAP45Q92619 1136 aa9.41□□□□□ -0.9
TRAPPC9-207ENST00000520532 TMX4Q9H1E5 349 aaPredicted RBP9.41□□□□□ -0.9
TRAPPC9-207ENST00000520532 ATP6V0A2Q9Y487 856 aa9.41□□□□□ -0.9
TRAPPC9-207ENST00000520532 H7C1W4 665 aa9.4□□□□□ -0.9
TRAPPC9-207ENST00000520532 TCERG1O14776 1098 aaKnown RBP9.4□□□□□ -0.9
TRAPPC9-207ENST00000520532 HCLS1P14317 486 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC9-207ENST00000520532 CASP7P55210 303 aa9.4□□□□□ -0.9
TRAPPC9-207ENST00000520532 C3orf67Q6ZVT6 689 aa9.4□□□□□ -0.9
TRAPPC9-207ENST00000520532 SUPT20HQ8NEM7 779 aa9.4□□□□□ -0.9
TRAPPC9-207ENST00000520532 API5Q9BZZ5 524 aaKnown RBP9.4□□□□□ -0.9
TRAPPC9-207ENST00000520532 SRCIN1Q9C0H9 1055 aa9.4□□□□□ -0.9
TRAPPC9-207ENST00000520532 RNF181Q9P0P0 153 aa9.4□□□□□ -0.9
TRAPPC9-207ENST00000520532 WWC3Q9ULE0 1092 aa9.4□□□□□ -0.9
TRAPPC9-207ENST00000520532 ZNF609O15014 1411 aa9.39□□□□□ -0.91
TRAPPC9-207ENST00000520532 KDM2BQ8NHM5 1336 aa9.39□□□□□ -0.91
TRAPPC9-207ENST00000520532 GRM8O00222 908 aa9.39□□□□□ -0.91
TRAPPC9-207ENST00000520532 RARSP54136 660 aaKnown RBP9.39□□□□□ -0.91
TRAPPC9-207ENST00000520532 RASSF7Q02833 373 aa9.39□□□□□ -0.91
TRAPPC9-207ENST00000520532 C9orf131Q5VYM1 1079 aa9.39□□□□□ -0.91
TRAPPC9-207ENST00000520532 UBE3BQ7Z3V4 1068 aa9.39□□□□□ -0.91
TRAPPC9-207ENST00000520532 SP8Q8IXZ3 490 aa9.39□□□□□ -0.91
TRAPPC9-207ENST00000520532 ZNF784Q8NCA9 323 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC9-207ENST00000520532 CDC5LQ99459 802 aaKnown RBP9.39□□□□□ -0.91
TRAPPC9-207ENST00000520532 RTFDC1Q9BY42 306 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC9-207ENST00000520532 ADAMTSL1Q8N6G6 1762 aa9.39□□□□□ -0.91
TRAPPC9-207ENST00000520532 COL4A5P29400 1685 aa9.39□□□□□ -0.91
TRAPPC9-207ENST00000520532 CCT4P50991 539 aaKnown RBP9.38□□□□□ -0.91
TRAPPC9-207ENST00000520532 SYNE4Q8N205 404 aa9.38□□□□□ -0.91
TRAPPC9-207ENST00000520532 F6X3S4 739 aa9.37□□□□□ -0.91
TRAPPC9-207ENST00000520532 IPO8O15397 1037 aaKnown RBP9.37□□□□□ -0.91
TRAPPC9-207ENST00000520532 IARSP41252 1262 aaKnown RBP9.37□□□□□ -0.91
TRAPPC9-207ENST00000520532 TTLL11Q8NHH1 800 aa9.37□□□□□ -0.91
TRAPPC9-207ENST00000520532 PODXL2Q9NZ53 605 aa9.37□□□□□ -0.91
TRAPPC9-207ENST00000520532 HDAC5Q9UQL6 1122 aa9.37□□□□□ -0.91
TRAPPC9-207ENST00000520532 MYH13Q9UKX3 1938 aa9.37□□□□□ -0.91
TRAPPC9-207ENST00000520532 CSF1RP07333 972 aa9.36□□□□□ -0.91
TRAPPC9-207ENST00000520532 RPS8P62241 208 aaKnown RBP9.36□□□□□ -0.91
TRAPPC9-207ENST00000520532 ANKRD18AQ8IVF6 992 aa9.36□□□□□ -0.91
TRAPPC9-207ENST00000520532 BCL2L13Q9BXK5 485 aa9.36□□□□□ -0.91
TRAPPC9-207ENST00000520532 GPBP1L1Q9HC44 474 aaPredicted RBP9.36□□□□□ -0.91
TRAPPC9-207ENST00000520532 C9orf78Q9NZ63 289 aaPredicted RBP9.36□□□□□ -0.91
TRAPPC9-207ENST00000520532 MED23Q9ULK4 1368 aa9.36□□□□□ -0.91
TRAPPC9-207ENST00000520532 XDHP47989 1333 aa9.35□□□□□ -0.91
TRAPPC9-207ENST00000520532 PRELPP51888 382 aa9.35□□□□□ -0.91
TRAPPC9-207ENST00000520532 KIAA2012Q0VF49 1180 aa9.35□□□□□ -0.91
TRAPPC9-207ENST00000520532 RABL6Q3YEC7 729 aaPredicted RBP9.35□□□□□ -0.91
TRAPPC9-207ENST00000520532 RTL5Q5HYW3 569 aaPredicted RBP9.35□□□□□ -0.91
TRAPPC9-207ENST00000520532 SLC4A10Q6U841 1118 aa9.35□□□□□ -0.91
TRAPPC9-207ENST00000520532 DPP8Q6V1X1 898 aaPredicted RBP9.35□□□□□ -0.91
TRAPPC9-207ENST00000520532 ATF7IPQ6VMQ6 1270 aa9.35□□□□□ -0.91
TRAPPC9-207ENST00000520532 MPNDQ8N594 471 aa9.35□□□□□ -0.91
TRAPPC9-207ENST00000520532 CELF1Q92879 486 aaKnown RBP9.35□□□□□ -0.91
TRAPPC9-207ENST00000520532 BSDC1Q9NW68 430 aaPredicted RBP9.35□□□□□ -0.91
TRAPPC9-207ENST00000520532 SCN9AQ15858 1988 aa9.34□□□□□ -0.91
TRAPPC9-207ENST00000520532 ECM29Q5VYK3 1845 aa9.34□□□□□ -0.91
TRAPPC9-207ENST00000520532 GLTPD2A6NH11 291 aa9.34□□□□□ -0.91
TRAPPC9-207ENST00000520532 FZD9O00144 591 aa9.34□□□□□ -0.91
TRAPPC9-207ENST00000520532 IGHMBP2P38935 993 aaKnown RBP9.34□□□□□ -0.91
TRAPPC9-207ENST00000520532 FAM161AQ3B820 660 aa9.34□□□□□ -0.91
TRAPPC9-207ENST00000520532 INTS3Q68E01 1043 aaKnown RBP9.34□□□□□ -0.91
TRAPPC9-207ENST00000520532 DPY19L2Q6NUT2 758 aa9.34□□□□□ -0.91
TRAPPC9-207ENST00000520532 JDP2Q8WYK2 163 aa9.34□□□□□ -0.91
TRAPPC9-207ENST00000520532 L3MBTL3Q96JM7 780 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC9-207ENST00000520532 EYA3Q99504 573 aa9.34□□□□□ -0.91
TRAPPC9-207ENST00000520532 GREM2Q9H772 168 aa9.34□□□□□ -0.91
TRAPPC9-207ENST00000520532 ANKRD18BA2A2Z9 1011 aa9.33□□□□□ -0.92
TRAPPC9-207ENST00000520532 TRIM27P14373 513 aa9.33□□□□□ -0.92
TRAPPC9-207ENST00000520532 ITGA6P23229 1130 aa9.33□□□□□ -0.92
TRAPPC9-207ENST00000520532 FOXO4P98177 505 aa9.33□□□□□ -0.92
TRAPPC9-207ENST00000520532 IFIT5Q13325 482 aaKnown RBP9.33□□□□□ -0.92
TRAPPC9-207ENST00000520532 ZKSCAN2Q63HK3 967 aa9.33□□□□□ -0.92
TRAPPC9-207ENST00000520532 GPC2Q8N158 579 aa9.33□□□□□ -0.92
TRAPPC9-207ENST00000520532 SEC31BQ9NQW1 1179 aa9.33□□□□□ -0.92
TRAPPC9-207ENST00000520532 ZNF219Q9P2Y4 722 aaPredicted RBP9.33□□□□□ -0.92
TRAPPC9-207ENST00000520532 NOB1Q9ULX3 412 aaKnown RBP9.33□□□□□ -0.92
TRAPPC9-207ENST00000520532 IQCA1LA6NCM1 817 aa9.32□□□□□ -0.92
TRAPPC9-207ENST00000520532 PPIP5K2O43314 1243 aa9.32□□□□□ -0.92
TRAPPC9-207ENST00000520532 GNAI3P08754 354 aa9.32□□□□□ -0.92
TRAPPC9-207ENST00000520532 NBPF7P0C2Y1 421 aaPredicted RBP9.32□□□□□ -0.92
TRAPPC9-207ENST00000520532 MS4A1P11836 297 aa9.32□□□□□ -0.92
TRAPPC9-207ENST00000520532 CCDC57Q2TAC2 916 aa9.32□□□□□ -0.92
TRAPPC9-207ENST00000520532 OLFM4Q6UX06 510 aa9.32□□□□□ -0.92
TRAPPC9-207ENST00000520532 NIM1KQ8IY84 436 aa9.32□□□□□ -0.92
TRAPPC9-207ENST00000520532 LARGE2Q8N3Y3 721 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms