RNA–Protein interactions for RNA: ENST00000519860.3

ERGIC1-206, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 3 BASIC

Gene ERGIC1, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-206ENST00000519860 MYD88Q99836 296 aa29.42■■■□□ 2.3
ERGIC1-206ENST00000519860 TRIM28Q13263 835 aaKnown RBP29.41■■■□□ 2.3
ERGIC1-206ENST00000519860 CCDC30Q5VVM6 783 aa29.41■■■□□ 2.3
ERGIC1-206ENST00000519860 SUPT20HQ8NEM7 779 aa29.41■■■□□ 2.3
ERGIC1-206ENST00000519860 IRS4O14654 1257 aaPredicted RBP29.4■■■□□ 2.3
ERGIC1-206ENST00000519860 PNMA8AQ86V59 439 aaPredicted RBP29.4■■■□□ 2.3
ERGIC1-206ENST00000519860 RTFDC1Q9BY42 306 aaPredicted RBP29.4■■■□□ 2.3
ERGIC1-206ENST00000519860 LMOD1P29536 600 aaPredicted RBP29.39■■■□□ 2.3
ERGIC1-206ENST00000519860 CCDC27Q2M243 656 aa29.39■■■□□ 2.3
ERGIC1-206ENST00000519860 CELF1Q92879 486 aaKnown RBP29.39■■■□□ 2.3
ERGIC1-206ENST00000519860 LTBP1Q14766 1721 aa29.38■■■□□ 2.29
ERGIC1-206ENST00000519860 SCNN1DP51172 638 aa29.38■■■□□ 2.29
ERGIC1-206ENST00000519860 SF3B3Q15393 1217 aaKnown RBP29.38■■■□□ 2.29
ERGIC1-206ENST00000519860 MAP1SQ66K74 1059 aaPredicted RBP29.38■■■□□ 2.29
ERGIC1-206ENST00000519860 COL4A1P02462 1669 aa29.37■■■□□ 2.29
ERGIC1-206ENST00000519860 ADAMTSL1Q8N6G6 1762 aa29.37■■■□□ 2.29
ERGIC1-206ENST00000519860 EPS15P42566 896 aa29.37■■■□□ 2.29
ERGIC1-206ENST00000519860 ZBTB38Q8NAP3 1195 aaPredicted RBP29.37■■■□□ 2.29
ERGIC1-206ENST00000519860 JARID2Q92833 1246 aaPredicted RBP29.37■■■□□ 2.29
ERGIC1-206ENST00000519860 VPS33BQ9H267 617 aa29.37■■■□□ 2.29
ERGIC1-206ENST00000519860 CREBZFQ9NS37 354 aa29.37■■■□□ 2.29
ERGIC1-206ENST00000519860 SALL2Q9Y467 1007 aaPredicted RBP29.37■■■□□ 2.29
ERGIC1-206ENST00000519860 PASKQ96RG2 1323 aa29.37■■■□□ 2.29
ERGIC1-206ENST00000519860 ZNRF3Q9ULT6 936 aa29.36■■■□□ 2.29
ERGIC1-206ENST00000519860 DDX58O95786 925 aaKnown RBP29.35■■■□□ 2.29
ERGIC1-206ENST00000519860 ITGBL1O95965 494 aaPredicted RBP29.35■■■□□ 2.29
ERGIC1-206ENST00000519860 KIAA2012Q0VF49 1180 aa29.35■■■□□ 2.29
ERGIC1-206ENST00000519860 TMC4Q7Z404 712 aa29.35■■■□□ 2.29
ERGIC1-206ENST00000519860 CHMP4AQ9BY43 222 aa29.35■■■□□ 2.29
ERGIC1-206ENST00000519860 MKRN1Q9UHC7 482 aaKnown RBP29.35■■■□□ 2.29
ERGIC1-206ENST00000519860 MAP3K2Q9Y2U5 619 aa29.35■■■□□ 2.29
ERGIC1-206ENST00000519860 CXCL9Q07325 125 aa29.34■■■□□ 2.29
ERGIC1-206ENST00000519860 METTL22Q9BUU2 404 aaPredicted RBP29.34■■■□□ 2.29
ERGIC1-206ENST00000519860 DUOX1Q9NRD9 1551 aa29.34■■■□□ 2.29
ERGIC1-206ENST00000519860 LRRC37AA6NMS7 1700 aa29.34■■■□□ 2.29
ERGIC1-206ENST00000519860 TWISTNBQ3B726 338 aaPredicted RBP29.33■■■□□ 2.29
ERGIC1-206ENST00000519860 CNTROBQ8N137 903 aa29.33■■■□□ 2.29
ERGIC1-206ENST00000519860 CCDC191Q8NCU4 936 aa29.33■■■□□ 2.29
ERGIC1-206ENST00000519860 STK31Q9BXU1 1019 aa29.33■■■□□ 2.29
ERGIC1-206ENST00000519860 NSFL1CQ9UNZ2 370 aaKnown RBP29.33■■■□□ 2.29
ERGIC1-206ENST00000519860 CWC25Q9NXE8 425 aaPredicted RBP29.32■■■□□ 2.28
ERGIC1-206ENST00000519860 RAD17O75943 681 aa29.31■■■□□ 2.28
ERGIC1-206ENST00000519860 PCCAP05165 728 aaPredicted RBP29.31■■■□□ 2.28
ERGIC1-206ENST00000519860 IFFO2Q5TF58 517 aa29.31■■■□□ 2.28
ERGIC1-206ENST00000519860 PCNTO95613 3336 aa29.3■■■□□ 2.28
ERGIC1-206ENST00000519860 PI4KAP2A4QPH2 592 aa29.3■■■□□ 2.28
ERGIC1-206ENST00000519860 PI4KAP1Q8N8J0 262 aa29.3■■■□□ 2.28
ERGIC1-206ENST00000519860 CCDC85AQ96PX6 553 aaPredicted RBP29.3■■■□□ 2.28
ERGIC1-206ENST00000519860 SEC31BQ9NQW1 1179 aa29.3■■■□□ 2.28
ERGIC1-206ENST00000519860 IL16Q14005 1332 aa29.29■■■□□ 2.28
ERGIC1-206ENST00000519860 GMPSP49915 693 aaPredicted RBP29.29■■■□□ 2.28
ERGIC1-206ENST00000519860 RPS8P62241 208 aaKnown RBP29.29■■■□□ 2.28
ERGIC1-206ENST00000519860 GPSM2P81274 684 aa29.29■■■□□ 2.28
ERGIC1-206ENST00000519860 CIAPIN1Q6FI81 312 aa29.29■■■□□ 2.28
ERGIC1-206ENST00000519860 KSR2Q6VAB6 950 aa29.29■■■□□ 2.28
ERGIC1-206ENST00000519860 GPRC5DQ9NZD1 345 aa29.29■■■□□ 2.28
ERGIC1-206ENST00000519860 TMEM88BA6NKF7 163 aa29.28■■■□□ 2.28
ERGIC1-206ENST00000519860 C6orf229H3BNL8 230 aa29.28■■■□□ 2.28
ERGIC1-206ENST00000519860 G2E3Q7L622 706 aa29.28■■■□□ 2.28
ERGIC1-206ENST00000519860 FANCIQ9NVI1 1328 aa29.27■■■□□ 2.28
ERGIC1-206ENST00000519860 YDJCA8MPS7 323 aa29.27■■■□□ 2.28
ERGIC1-206ENST00000519860 RIMBP2O15034 1052 aa29.27■■■□□ 2.28
ERGIC1-206ENST00000519860 HSP90B1P14625 803 aaKnown RBP29.27■■■□□ 2.28
ERGIC1-206ENST00000519860 WASHC4Q2M389 1173 aa29.27■■■□□ 2.28
ERGIC1-206ENST00000519860 POLLQ9UGP5 575 aa29.27■■■□□ 2.28
ERGIC1-206ENST00000519860 PDE8AO60658 829 aa29.26■■■□□ 2.27
ERGIC1-206ENST00000519860 SLC4A2P04920 1241 aa29.26■■■□□ 2.27
ERGIC1-206ENST00000519860 IGKV5-2P06315 115 aa29.26■■■□□ 2.27
ERGIC1-206ENST00000519860 USP50Q70EL3 339 aaPredicted RBP29.26■■■□□ 2.27
ERGIC1-206ENST00000519860 GPR101Q96P66 508 aaPredicted RBP29.26■■■□□ 2.27
ERGIC1-206ENST00000519860 HSPA1AP0DMV8 641 aaKnown RBP29.25■■■□□ 2.27
ERGIC1-206ENST00000519860 HSPA1BP0DMV9 641 aaKnown RBP29.25■■■□□ 2.27
ERGIC1-206ENST00000519860 CCDC152Q4G0S7 254 aa29.25■■■□□ 2.27
ERGIC1-206ENST00000519860 BCL2L13Q9BXK5 485 aa29.25■■■□□ 2.27
ERGIC1-206ENST00000519860 DBNDD1Q9H9R9 158 aa29.25■■■□□ 2.27
ERGIC1-206ENST00000519860 CNTNAP1P78357 1384 aa29.25■■■□□ 2.27
ERGIC1-206ENST00000519860 FMR1Q06787 632 aaKnown RBP eCLIP29.24■■■□□ 2.277e-18■■■■■ 33.5
ERGIC1-206ENST00000519860 TNIP1Q15025 636 aa29.24■■■□□ 2.27
ERGIC1-206ENST00000519860 CWF19L2Q2TBE0 894 aaKnown RBP29.24■■■□□ 2.27
ERGIC1-206ENST00000519860 FAM9BQ8IZU0 186 aa29.24■■■□□ 2.27
ERGIC1-206ENST00000519860 ADARB2Q9NS39 739 aaKnown RBP29.24■■■□□ 2.27
ERGIC1-206ENST00000519860 NEXNQ0ZGT2 675 aa29.23■■■□□ 2.27
ERGIC1-206ENST00000519860 NCBP3Q53F19 620 aaKnown RBP29.23■■■□□ 2.27
ERGIC1-206ENST00000519860 DOK7Q18PE1 504 aa29.21■■■□□ 2.27
ERGIC1-206ENST00000519860 COL13A1Q5TAT6 717 aaPredicted RBP29.21■■■□□ 2.27
ERGIC1-206ENST00000519860 WDR63Q8IWG1 891 aa29.21■■■□□ 2.27
ERGIC1-206ENST00000519860 TBC1D16Q8TBP0 767 aa29.21■■■□□ 2.27
ERGIC1-206ENST00000519860 ANKIB1Q9P2G1 1089 aa29.21■■■□□ 2.27
ERGIC1-206ENST00000519860 SHTN1A0MZ66 631 aa29.2■■■□□ 2.26
ERGIC1-206ENST00000519860 TRAF5O00463 557 aa29.2■■■□□ 2.26
ERGIC1-206ENST00000519860 ZBTB12Q9Y330 459 aaPredicted RBP29.2■■■□□ 2.26
ERGIC1-206ENST00000519860 CDHR2Q9BYE9 1310 aa29.2■■■□□ 2.26
ERGIC1-206ENST00000519860 NEURL1BA8MQ27 555 aa29.19■■■□□ 2.26
ERGIC1-206ENST00000519860 CTSWP56202 376 aa29.19■■■□□ 2.26
ERGIC1-206ENST00000519860 EXOSC9Q06265 439 aaKnown RBP29.19■■■□□ 2.26
ERGIC1-206ENST00000519860 FLIIQ13045 1269 aa29.19■■■□□ 2.26
ERGIC1-206ENST00000519860 EYA3Q99504 573 aa29.19■■■□□ 2.26
ERGIC1-206ENST00000519860 PSMD14O00487 310 aa29.18■■■□□ 2.26
ERGIC1-206ENST00000519860 ECE2O60344 883 aa29.18■■■□□ 2.26
ERGIC1-206ENST00000519860 UFL1O94874 794 aa29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms