RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 CREBZFQ9NS37 354 aa32.67■■■□□ 2.82
VEGFA-220ENST00000519767 DDX58O95786 925 aaKnown RBP32.66■■■□□ 2.82
VEGFA-220ENST00000519767 LMOD1P29536 600 aaPredicted RBP32.66■■■□□ 2.82
VEGFA-220ENST00000519767 SLC51AQ86UW1 340 aa32.66■■■□□ 2.82
VEGFA-220ENST00000519767 WWC1Q8IX03 1113 aa32.66■■■□□ 2.82
VEGFA-220ENST00000519767 ZNF428Q96B54 188 aa32.66■■■□□ 2.82
VEGFA-220ENST00000519767 MRS2Q9HD23 443 aa32.66■■■□□ 2.82
VEGFA-220ENST00000519767 IRS4O14654 1257 aaPredicted RBP32.65■■■□□ 2.82
VEGFA-220ENST00000519767 AOC3Q16853 763 aa32.65■■■□□ 2.82
VEGFA-220ENST00000519767 ZBTB38Q8NAP3 1195 aaPredicted RBP32.65■■■□□ 2.82
VEGFA-220ENST00000519767 ZNRF3Q9ULT6 936 aa32.65■■■□□ 2.82
VEGFA-220ENST00000519767 CCDC191Q8NCU4 936 aa32.64■■■□□ 2.82
VEGFA-220ENST00000519767 IL16Q14005 1332 aa32.62■■■□□ 2.81
VEGFA-220ENST00000519767 PASKQ96RG2 1323 aa32.62■■■□□ 2.81
VEGFA-220ENST00000519767 ITGBL1O95965 494 aaPredicted RBP32.62■■■□□ 2.81
VEGFA-220ENST00000519767 KIAA2012Q0VF49 1180 aa32.62■■■□□ 2.81
VEGFA-220ENST00000519767 TSPYL6Q8N831 410 aa32.62■■■□□ 2.81
VEGFA-220ENST00000519767 RTL5Q5HYW3 569 aaPredicted RBP32.61■■■□□ 2.81
VEGFA-220ENST00000519767 MYD88Q99836 296 aa32.61■■■□□ 2.81
VEGFA-220ENST00000519767 METTL22Q9BUU2 404 aaPredicted RBP32.61■■■□□ 2.81
VEGFA-220ENST00000519767 COL4A5P29400 1685 aa32.61■■■□□ 2.81
VEGFA-220ENST00000519767 IFFO2Q5TF58 517 aa32.6■■■□□ 2.81
VEGFA-220ENST00000519767 TSR2Q969E8 191 aaKnown RBP32.6■■■□□ 2.81
VEGFA-220ENST00000519767 STK31Q9BXU1 1019 aa32.6■■■□□ 2.81
VEGFA-220ENST00000519767 CNTROBQ8N137 903 aa32.59■■■□□ 2.81
VEGFA-220ENST00000519767 PCCAP05165 728 aaPredicted RBP32.58■■■□□ 2.81
VEGFA-220ENST00000519767 SCNN1DP51172 638 aa32.58■■■□□ 2.81
VEGFA-220ENST00000519767 CXCL9Q07325 125 aa32.58■■■□□ 2.81
VEGFA-220ENST00000519767 CWC25Q9NXE8 425 aaPredicted RBP32.58■■■□□ 2.81
VEGFA-220ENST00000519767 EPS15P42566 896 aa32.57■■■□□ 2.8
VEGFA-220ENST00000519767 RPS8P62241 208 aaKnown RBP32.57■■■□□ 2.8
VEGFA-220ENST00000519767 KSR2Q6VAB6 950 aa32.57■■■□□ 2.8
VEGFA-220ENST00000519767 USP50Q70EL3 339 aaPredicted RBP32.57■■■□□ 2.8
VEGFA-220ENST00000519767 CELF1Q92879 486 aaKnown RBP32.57■■■□□ 2.8
VEGFA-220ENST00000519767 TNIP1Q15025 636 aa32.56■■■□□ 2.8
VEGFA-220ENST00000519767 NSFL1CQ9UNZ2 370 aaKnown RBP32.56■■■□□ 2.8
VEGFA-220ENST00000519767 LAMB2P55268 1798 aa32.55■■■□□ 2.8
VEGFA-220ENST00000519767 PCNTO95613 3336 aa32.55■■■□□ 2.8
VEGFA-220ENST00000519767 TMEM88BA6NKF7 163 aa32.55■■■□□ 2.8
VEGFA-220ENST00000519767 TWISTNBQ3B726 338 aaPredicted RBP32.55■■■□□ 2.8
VEGFA-220ENST00000519767 MAP3K2Q9Y2U5 619 aa32.55■■■□□ 2.8
VEGFA-220ENST00000519767 MAP1SQ66K74 1059 aaPredicted RBP32.54■■■□□ 2.8
VEGFA-220ENST00000519767 CIAPIN1Q6FI81 312 aa32.54■■■□□ 2.8
VEGFA-220ENST00000519767 WASHC4Q2M389 1173 aa32.53■■■□□ 2.8
VEGFA-220ENST00000519767 WDR63Q8IWG1 891 aa32.53■■■□□ 2.8
VEGFA-220ENST00000519767 GPRC5DQ9NZD1 345 aa32.53■■■□□ 2.8
VEGFA-220ENST00000519767 PI4KAP2A4QPH2 592 aa32.52■■■□□ 2.8
VEGFA-220ENST00000519767 PDE8AO60658 829 aa32.52■■■□□ 2.8
VEGFA-220ENST00000519767 NEXNQ0ZGT2 675 aa32.52■■■□□ 2.8
VEGFA-220ENST00000519767 CCDC152Q4G0S7 254 aa32.52■■■□□ 2.8
VEGFA-220ENST00000519767 PI4KAP1Q8N8J0 262 aa32.52■■■□□ 2.8
VEGFA-220ENST00000519767 ADARB2Q9NS39 739 aaKnown RBP32.52■■■□□ 2.8
VEGFA-220ENST00000519767 SLC4A2P04920 1241 aa32.5■■■□□ 2.79
VEGFA-220ENST00000519767 MKRN1Q9UHC7 482 aaKnown RBP32.5■■■□□ 2.79
VEGFA-220ENST00000519767 CDHR2Q9BYE9 1310 aa32.5■■■□□ 2.79
VEGFA-220ENST00000519767 DDX60Q8IY21 1712 aaKnown RBP32.49■■■□□ 2.79
VEGFA-220ENST00000519767 C6orf229H3BNL8 230 aa32.49■■■□□ 2.79
VEGFA-220ENST00000519767 EYA3Q99504 573 aa32.49■■■□□ 2.79
VEGFA-220ENST00000519767 RAD17O75943 681 aa32.48■■■□□ 2.79
VEGFA-220ENST00000519767 GMPSP49915 693 aaPredicted RBP32.48■■■□□ 2.79
VEGFA-220ENST00000519767 GPSM2P81274 684 aa32.48■■■□□ 2.79
VEGFA-220ENST00000519767 ADAMTSL1Q8N6G6 1762 aa32.47■■■□□ 2.79
VEGFA-220ENST00000519767 BCL2L13Q9BXK5 485 aa32.47■■■□□ 2.79
VEGFA-220ENST00000519767 POLLQ9UGP5 575 aa32.47■■■□□ 2.79
VEGFA-220ENST00000519767 SEC31BQ9NQW1 1179 aa32.46■■■□□ 2.79
VEGFA-220ENST00000519767 PODXL2Q9NZ53 605 aa32.46■■■□□ 2.79
VEGFA-220ENST00000519767 CNTNAP1P78357 1384 aa32.45■■■□□ 2.79
VEGFA-220ENST00000519767 IGKV5-2P06315 115 aa32.45■■■□□ 2.79
VEGFA-220ENST00000519767 JARID2Q92833 1246 aaPredicted RBP32.45■■■□□ 2.79
VEGFA-220ENST00000519767 YDJCA8MPS7 323 aa32.44■■■□□ 2.78
VEGFA-220ENST00000519767 TBC1D16Q8TBP0 767 aa32.44■■■□□ 2.78
VEGFA-220ENST00000519767 SALL2Q9Y467 1007 aaPredicted RBP32.44■■■□□ 2.78
VEGFA-220ENST00000519767 TAF1P21675 1872 aa32.44■■■□□ 2.78
VEGFA-220ENST00000519767 RIMBP2O15034 1052 aa32.43■■■□□ 2.78
VEGFA-220ENST00000519767 ZC3H12CQ9C0D7 883 aaKnown RBP32.43■■■□□ 2.78
VEGFA-220ENST00000519767 FANCIQ9NVI1 1328 aa32.43■■■□□ 2.78
VEGFA-220ENST00000519767 HSPA1AP0DMV8 641 aaKnown RBP32.42■■■□□ 2.78
VEGFA-220ENST00000519767 HSPA1BP0DMV9 641 aaKnown RBP32.42■■■□□ 2.78
VEGFA-220ENST00000519767 G2E3Q7L622 706 aa32.42■■■□□ 2.78
VEGFA-220ENST00000519767 ZC3H15Q8WU90 426 aaKnown RBP32.42■■■□□ 2.78
VEGFA-220ENST00000519767 DPF2Q92785 391 aa32.42■■■□□ 2.78
VEGFA-220ENST00000519767 ANKIB1Q9P2G1 1089 aa32.42■■■□□ 2.78
VEGFA-220ENST00000519767 LRRC37AA6NMS7 1700 aa32.41■■■□□ 2.78
VEGFA-220ENST00000519767 LTBP1Q14766 1721 aa32.41■■■□□ 2.78
VEGFA-220ENST00000519767 H7C1D1 291 aa32.41■■■□□ 2.78
VEGFA-220ENST00000519767 ANKRD18AQ8IVF6 992 aa32.41■■■□□ 2.78
VEGFA-220ENST00000519767 PGAP2Q9UHJ9 254 aa32.41■■■□□ 2.78
VEGFA-220ENST00000519767 CNOT7Q9UIV1 285 aaKnown RBP32.41■■■□□ 2.78
VEGFA-220ENST00000519767 NEURL1BA8MQ27 555 aa32.4■■■□□ 2.78
VEGFA-220ENST00000519767 VAMP4O75379 141 aa32.4■■■□□ 2.78
VEGFA-220ENST00000519767 FLIIQ13045 1269 aa32.4■■■□□ 2.78
VEGFA-220ENST00000519767 DEFB115Q30KQ5 88 aa32.4■■■□□ 2.78
VEGFA-220ENST00000519767 DBNDD1Q9H9R9 158 aa32.4■■■□□ 2.78
VEGFA-220ENST00000519767 DUOX1Q9NRD9 1551 aa32.4■■■□□ 2.78
VEGFA-220ENST00000519767 H7C1W4 665 aa32.39■■■□□ 2.78
VEGFA-220ENST00000519767 CTSWP56202 376 aa32.39■■■□□ 2.78
VEGFA-220ENST00000519767 CDC5LQ99459 802 aaKnown RBP32.39■■■□□ 2.78
VEGFA-220ENST00000519767 GGA1Q9UJY5 639 aa32.39■■■□□ 2.78
VEGFA-220ENST00000519767 RASSF10A6NK89 507 aa32.38■■■□□ 2.77
VEGFA-220ENST00000519767 VEGFBP49765 207 aa32.38■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms