RNA–Protein interactions for RNA: ENST00000519534.1

CHTF8-206, Transcript of chromosome transmission fidelity factor 8, human

TSL 2

Gene CHTF8, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHTF8-206	ENST00000519534	BBOX1	O75936	387 aa		13.52	□□□□□ -0.25
CHTF8-206	ENST00000519534	TMC4	Q7Z404	712 aa		13.52	□□□□□ -0.25
CHTF8-206	ENST00000519534	RBM17	Q96I25	401 aa	Known RBP	13.52	□□□□□ -0.25
CHTF8-206	ENST00000519534	SUCLG2	Q96I99	432 aa		13.52	□□□□□ -0.25
CHTF8-206	ENST00000519534	NRXN2	Q9P2S2	1712 aa		13.52	□□□□□ -0.25
CHTF8-206	ENST00000519534	ATP8B2	P98198	1209 aa		13.51	□□□□□ -0.25
CHTF8-206	ENST00000519534	RTL5	Q5HYW3	569 aa	Predicted RBP	13.51	□□□□□ -0.25
CHTF8-206	ENST00000519534	CNKSR1	Q969H4	720 aa		13.51	□□□□□ -0.25
CHTF8-206	ENST00000519534	BICC1	Q9H694	974 aa	Known RBP	13.51	□□□□□ -0.25
CHTF8-206	ENST00000519534	FBXO3	Q9UK99	471 aa		13.51	□□□□□ -0.25
CHTF8-206	ENST00000519534	LRRFIP2	Q9Y608	721 aa	Known RBP	13.51	□□□□□ -0.25
CHTF8-206	ENST00000519534	ABCC12	Q96J65	1359 aa		13.5	□□□□□ -0.25
CHTF8-206	ENST00000519534	GRIPAP1	Q4V328	841 aa		13.5	□□□□□ -0.25
CHTF8-206	ENST00000519534	LMBR1L	Q6UX01	489 aa		13.5	□□□□□ -0.25
CHTF8-206	ENST00000519534	DDX46	Q7L014	1031 aa	Known RBP	13.5	□□□□□ -0.25
CHTF8-206	ENST00000519534	ANKRD44	Q8N8A2	993 aa		13.5	□□□□□ -0.25
CHTF8-206	ENST00000519534	JARID2	Q92833	1246 aa	Predicted RBP	13.5	□□□□□ -0.25
CHTF8-206	ENST00000519534	CRBN	Q96SW2	442 aa		13.5	□□□□□ -0.25
CHTF8-206	ENST00000519534	PPP1R1B	Q9UD71	204 aa	Predicted RBP	13.5	□□□□□ -0.25
CHTF8-206	ENST00000519534	KCNA3	P22001	575 aa		13.49	□□□□□ -0.25
CHTF8-206	ENST00000519534	IFIT5	Q13325	482 aa	Known RBP	13.49	□□□□□ -0.25
CHTF8-206	ENST00000519534	CCDC57	Q2TAC2	916 aa		13.49	□□□□□ -0.25
CHTF8-206	ENST00000519534	EPHA10	Q5JZY3	1008 aa		13.49	□□□□□ -0.25
CHTF8-206	ENST00000519534	C2CD5	Q86YS7	1000 aa		13.49	□□□□□ -0.25
CHTF8-206	ENST00000519534	RPGR	Q92834	1020 aa	Known RBP	13.49	□□□□□ -0.25
CHTF8-206	ENST00000519534	CDC5L	Q99459	802 aa	Known RBP	13.49	□□□□□ -0.25
CHTF8-206	ENST00000519534	SYT17	Q9BSW7	474 aa		13.49	□□□□□ -0.25
CHTF8-206	ENST00000519534	PIM2	Q9P1W9	311 aa		13.49	□□□□□ -0.25
CHTF8-206	ENST00000519534	ANKRD36C	Q5JPF3	1778 aa		13.49	□□□□□ -0.25
CHTF8-206	ENST00000519534	ANKRD18B	A2A2Z9	1011 aa		13.48	□□□□□ -0.25
CHTF8-206	ENST00000519534	HMMR	O75330	724 aa		13.48	□□□□□ -0.25
CHTF8-206	ENST00000519534	RPS8	P62241	208 aa	Known RBP	13.48	□□□□□ -0.25
CHTF8-206	ENST00000519534	GRAP	Q13588	217 aa		13.48	□□□□□ -0.25
CHTF8-206	ENST00000519534	CC2D2B	Q6DHV5	1058 aa		13.48	□□□□□ -0.25
CHTF8-206	ENST00000519534	CCDC24	Q8N4L8	307 aa		13.48	□□□□□ -0.25
CHTF8-206	ENST00000519534	GRAPL	Q8TC17	118 aa	Predicted RBP	13.48	□□□□□ -0.25
CHTF8-206	ENST00000519534	SSH3	Q8TE77	659 aa		13.48	□□□□□ -0.25
CHTF8-206	ENST00000519534	FHDC1	Q9C0D6	1143 aa	Predicted RBP	13.48	□□□□□ -0.25
CHTF8-206	ENST00000519534	NEFL	P07196	543 aa		13.47	□□□□□ -0.25
CHTF8-206	ENST00000519534	DPEP1	P16444	411 aa		13.47	□□□□□ -0.25
CHTF8-206	ENST00000519534	ITGA6	P23229	1130 aa		13.47	□□□□□ -0.25
CHTF8-206	ENST00000519534	POLA2	Q14181	598 aa		13.47	□□□□□ -0.25
CHTF8-206	ENST00000519534	CEP85	Q6P2H3	762 aa		13.47	□□□□□ -0.25
CHTF8-206	ENST00000519534	C3orf67	Q6ZVT6	689 aa		13.47	□□□□□ -0.25
CHTF8-206	ENST00000519534	TTLL6	Q8N841	843 aa		13.47	□□□□□ -0.25
CHTF8-206	ENST00000519534	GREM2	Q9H772	168 aa		13.47	□□□□□ -0.25
CHTF8-206	ENST00000519534	COPRS	Q9NQ92	184 aa		13.47	□□□□□ -0.25
CHTF8-206	ENST00000519534	BSDC1	Q9NW68	430 aa	Predicted RBP	13.47	□□□□□ -0.25
CHTF8-206	ENST00000519534	SRGAP3	O43295	1099 aa		13.46	□□□□□ -0.25
CHTF8-206	ENST00000519534	RFX5	P48382	616 aa	Predicted RBP	13.46	□□□□□ -0.25
CHTF8-206	ENST00000519534	SOGA3	Q5TF21	947 aa		13.46	□□□□□ -0.25
CHTF8-206	ENST00000519534	SP8	Q8IXZ3	490 aa		13.46	□□□□□ -0.25
CHTF8-206	ENST00000519534	EXOC6	Q8TAG9	804 aa		13.46	□□□□□ -0.25
CHTF8-206	ENST00000519534		A0A0G2JLW4	131 aa		13.45	□□□□□ -0.26
CHTF8-206	ENST00000519534	CIAO1	O76071	339 aa		13.45	□□□□□ -0.26
CHTF8-206	ENST00000519534	CHRNA5	P30532	468 aa		13.45	□□□□□ -0.26
CHTF8-206	ENST00000519534	IGHMBP2	P38935	993 aa	Known RBP	13.45	□□□□□ -0.26
CHTF8-206	ENST00000519534	DALRD3	Q5D0E6	543 aa	Known RBP	13.45	□□□□□ -0.26
CHTF8-206	ENST00000519534	ANKRD18A	Q8IVF6	992 aa		13.45	□□□□□ -0.26
CHTF8-206	ENST00000519534	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.45	□□□□□ -0.26
CHTF8-206	ENST00000519534	TMX4	Q9H1E5	349 aa	Predicted RBP	13.45	□□□□□ -0.26
CHTF8-206	ENST00000519534	NOP58	Q9Y2X3	529 aa	Known RBP	13.45	□□□□□ -0.26
CHTF8-206	ENST00000519534	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.45	□□□□□ -0.26
CHTF8-206	ENST00000519534	PTPN12	Q05209	780 aa	Known RBP	13.44	□□□□□ -0.26
CHTF8-206	ENST00000519534	HDAC1	Q13547	482 aa	Predicted RBP	13.44	□□□□□ -0.26
CHTF8-206	ENST00000519534	FAM161A	Q3B820	660 aa		13.44	□□□□□ -0.26
CHTF8-206	ENST00000519534	HSP90AB4P	Q58FF6	505 aa		13.44	□□□□□ -0.26
CHTF8-206	ENST00000519534	C7orf43	Q8WVR3	580 aa		13.44	□□□□□ -0.26
CHTF8-206	ENST00000519534	MPHOSPH8	Q99549	860 aa		13.44	□□□□□ -0.26
CHTF8-206	ENST00000519534	ATP6V0A2	Q9Y487	856 aa		13.44	□□□□□ -0.26
CHTF8-206	ENST00000519534	PNMA6E	A0A0J9YXQ4	647 aa		13.43	□□□□□ -0.26
CHTF8-206	ENST00000519534	LDHAL6A	Q6ZMR3	332 aa		13.43	□□□□□ -0.26
CHTF8-206	ENST00000519534	SIRT2	Q8IXJ6	389 aa		13.43	□□□□□ -0.26
CHTF8-206	ENST00000519534	CELF1	Q92879	486 aa	Known RBP	13.43	□□□□□ -0.26
CHTF8-206	ENST00000519534	SEC31B	Q9NQW1	1179 aa		13.43	□□□□□ -0.26
CHTF8-206	ENST00000519534	CHMP3	Q9Y3E7	222 aa		13.43	□□□□□ -0.26
CHTF8-206	ENST00000519534	RIPOR2	Q9Y4F9	1068 aa		13.43	□□□□□ -0.26
CHTF8-206	ENST00000519534	PCDHB15	Q9Y5E8	787 aa		13.43	□□□□□ -0.26
CHTF8-206	ENST00000519534	LRP5	O75197	1615 aa		13.42	□□□□□ -0.26
CHTF8-206	ENST00000519534	AFDN	P55196	1824 aa	Known RBP	13.42	□□□□□ -0.26
CHTF8-206	ENST00000519534	EYA2	O00167	538 aa		13.42	□□□□□ -0.26
CHTF8-206	ENST00000519534	IL15	P40933	162 aa	Predicted RBP	13.42	□□□□□ -0.26
CHTF8-206	ENST00000519534	TAF7L	Q5H9L4	462 aa		13.42	□□□□□ -0.26
CHTF8-206	ENST00000519534	PRPF40B	Q6NWY9	871 aa	Known RBP	13.42	□□□□□ -0.26
CHTF8-206	ENST00000519534	RTKN2	Q8IZC4	609 aa		13.42	□□□□□ -0.26
CHTF8-206	ENST00000519534	ANKRD2	Q9GZV1	360 aa		13.42	□□□□□ -0.26
CHTF8-206	ENST00000519534	VPS33B	Q9H267	617 aa		13.42	□□□□□ -0.26
CHTF8-206	ENST00000519534	RWDD1	Q9H446	243 aa	Predicted RBP	13.42	□□□□□ -0.26
CHTF8-206	ENST00000519534	DCTPP1	Q9H773	170 aa		13.42	□□□□□ -0.26
CHTF8-206	ENST00000519534	C1orf115	Q9H7X2	142 aa		13.42	□□□□□ -0.26
CHTF8-206	ENST00000519534	PODXL2	Q9NZ53	605 aa		13.42	□□□□□ -0.26
CHTF8-206	ENST00000519534	MROH5	Q6ZUA9	1318 aa		13.41	□□□□□ -0.26
CHTF8-206	ENST00000519534	RAB11FIP3	O75154	756 aa		13.41	□□□□□ -0.26
CHTF8-206	ENST00000519534	NPM3	O75607	178 aa	Known RBP	13.41	□□□□□ -0.26
CHTF8-206	ENST00000519534	NLGN2	Q8NFZ4	835 aa		13.41	□□□□□ -0.26
CHTF8-206	ENST00000519534	MINPP1	Q9UNW1	487 aa		13.41	□□□□□ -0.26
CHTF8-206	ENST00000519534	KIF13B	Q9NQT8	1826 aa		13.41	□□□□□ -0.26
CHTF8-206	ENST00000519534	PPEF1	O14829	653 aa	Predicted RBP	13.4	□□□□□ -0.26
CHTF8-206	ENST00000519534	G3BP1	Q13283	466 aa	Known RBP eCLIP	13.4	□□□□□ -0.26
CHTF8-206	ENST00000519534	ERC1	Q8IUD2	1116 aa		13.4	□□□□□ -0.26

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