RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 SLC51AQ86UW1 340 aa16.08■□□□□ 0.16
TRAPPC9-206ENST00000519482 MPNDQ8N594 471 aa16.08■□□□□ 0.16
TRAPPC9-206ENST00000519482 FAM89AQ96GI7 184 aa16.08■□□□□ 0.16
TRAPPC9-206ENST00000519482 CLEC11AQ9Y240 323 aa16.08■□□□□ 0.16
TRAPPC9-206ENST00000519482 GJA3Q9Y6H8 435 aa16.08■□□□□ 0.16
TRAPPC9-206ENST00000519482 ATP5J2-PTCD1G3V325 749 aa16.07■□□□□ 0.16
TRAPPC9-206ENST00000519482 ELL2O00472 640 aaPredicted RBP16.07■□□□□ 0.16
TRAPPC9-206ENST00000519482 ITGBL1O95965 494 aaPredicted RBP16.07■□□□□ 0.16
TRAPPC9-206ENST00000519482 LMOD1P29536 600 aaPredicted RBP16.07■□□□□ 0.16
TRAPPC9-206ENST00000519482 SF3B3Q15393 1217 aaKnown RBP16.07■□□□□ 0.16
TRAPPC9-206ENST00000519482 AOC3Q16853 763 aa16.07■□□□□ 0.16
TRAPPC9-206ENST00000519482 CCDC27Q2M243 656 aa16.07■□□□□ 0.16
TRAPPC9-206ENST00000519482 RIC3Q7Z5B4 369 aa16.07■□□□□ 0.16
TRAPPC9-206ENST00000519482 PHAXQ9H814 394 aaKnown RBP16.07■□□□□ 0.16
TRAPPC9-206ENST00000519482 CCDC184Q52MB2 194 aa16.06■□□□□ 0.16
TRAPPC9-206ENST00000519482 CCDC30Q5VVM6 783 aa16.06■□□□□ 0.16
TRAPPC9-206ENST00000519482 C8orf58Q8NAV2 365 aa16.06■□□□□ 0.16
TRAPPC9-206ENST00000519482 ZNRF3Q9ULT6 936 aa16.06■□□□□ 0.16
TRAPPC9-206ENST00000519482 PCNTO95613 3336 aa16.06■□□□□ 0.16
TRAPPC9-206ENST00000519482 HSP90B1P14625 803 aaKnown RBP16.05■□□□□ 0.16
TRAPPC9-206ENST00000519482 SCNN1DP51172 638 aa16.05■□□□□ 0.16
TRAPPC9-206ENST00000519482 KIAA2012Q0VF49 1180 aa16.05■□□□□ 0.16
TRAPPC9-206ENST00000519482 NCBP3Q53F19 620 aaKnown RBP16.05■□□□□ 0.16
TRAPPC9-206ENST00000519482 DUOX1Q9NRD9 1551 aa16.04■□□□□ 0.16
TRAPPC9-206ENST00000519482 CACNA1FO60840 1977 aa16.04■□□□□ 0.16
TRAPPC9-206ENST00000519482 IRS4O14654 1257 aaPredicted RBP16.04■□□□□ 0.16
TRAPPC9-206ENST00000519482 USP50Q70EL3 339 aaPredicted RBP16.04■□□□□ 0.16
TRAPPC9-206ENST00000519482 CNTROBQ8N137 903 aa16.04■□□□□ 0.16
TRAPPC9-206ENST00000519482 ZBTB38Q8NAP3 1195 aaPredicted RBP16.04■□□□□ 0.16
TRAPPC9-206ENST00000519482 ZNF428Q96B54 188 aa16.04■□□□□ 0.16
TRAPPC9-206ENST00000519482 TMEM88BA6NKF7 163 aa16.03■□□□□ 0.16
TRAPPC9-206ENST00000519482 DDX58O95786 925 aaKnown RBP16.03■□□□□ 0.16
TRAPPC9-206ENST00000519482 CXCL9Q07325 125 aa16.03■□□□□ 0.16
TRAPPC9-206ENST00000519482 CCDC191Q8NCU4 936 aa16.03■□□□□ 0.16
TRAPPC9-206ENST00000519482 TRPM7Q96QT4 1865 aa16.03■□□□□ 0.16
TRAPPC9-206ENST00000519482 MYH3P11055 1940 aa16.02■□□□□ 0.16
TRAPPC9-206ENST00000519482 CDHR2Q9BYE9 1310 aa16.02■□□□□ 0.16
TRAPPC9-206ENST00000519482 EPS15P42566 896 aa16.02■□□□□ 0.16
TRAPPC9-206ENST00000519482 RTL5Q5HYW3 569 aaPredicted RBP16.02■□□□□ 0.16
TRAPPC9-206ENST00000519482 MAP1SQ66K74 1059 aaPredicted RBP16.02■□□□□ 0.16
TRAPPC9-206ENST00000519482 WWC1Q8IX03 1113 aa16.02■□□□□ 0.16
TRAPPC9-206ENST00000519482 CELF1Q92879 486 aaKnown RBP16.02■□□□□ 0.16
TRAPPC9-206ENST00000519482 MYD88Q99836 296 aa16.02■□□□□ 0.16
TRAPPC9-206ENST00000519482 METTL22Q9BUU2 404 aaPredicted RBP16.02■□□□□ 0.16
TRAPPC9-206ENST00000519482 CNTNAP1P78357 1384 aa16.01■□□□□ 0.15
TRAPPC9-206ENST00000519482 IL16Q14005 1332 aa16.01■□□□□ 0.15
TRAPPC9-206ENST00000519482 PCCAP05165 728 aaPredicted RBP16.01■□□□□ 0.15
TRAPPC9-206ENST00000519482 TNIP1Q15025 636 aa16.01■□□□□ 0.15
TRAPPC9-206ENST00000519482 CIAPIN1Q6FI81 312 aa16.01■□□□□ 0.15
TRAPPC9-206ENST00000519482 TSPYL6Q8N831 410 aa16.01■□□□□ 0.15
TRAPPC9-206ENST00000519482 ADARB2Q9NS39 739 aaKnown RBP16.01■□□□□ 0.15
TRAPPC9-206ENST00000519482 GPRC5DQ9NZD1 345 aa16.01■□□□□ 0.15
TRAPPC9-206ENST00000519482 MKRN1Q9UHC7 482 aaKnown RBP16.01■□□□□ 0.15
TRAPPC9-206ENST00000519482 COL4A1P02462 1669 aa16■□□□□ 0.15
TRAPPC9-206ENST00000519482 HSPA1AP0DMV8 641 aaKnown RBP16■□□□□ 0.15
TRAPPC9-206ENST00000519482 HSPA1BP0DMV9 641 aaKnown RBP16■□□□□ 0.15
TRAPPC9-206ENST00000519482 RPS8P62241 208 aaKnown RBP16■□□□□ 0.15
TRAPPC9-206ENST00000519482 TSR2Q969E8 191 aaKnown RBP16■□□□□ 0.15
TRAPPC9-206ENST00000519482 STK31Q9BXU1 1019 aa16■□□□□ 0.15
TRAPPC9-206ENST00000519482 MRS2Q9HD23 443 aa16■□□□□ 0.15
TRAPPC9-206ENST00000519482 CWC25Q9NXE8 425 aaPredicted RBP16■□□□□ 0.15
TRAPPC9-206ENST00000519482 NSFL1CQ9UNZ2 370 aaKnown RBP16■□□□□ 0.15
TRAPPC9-206ENST00000519482 PDE8AO60658 829 aa15.99■□□□□ 0.15
TRAPPC9-206ENST00000519482 WASHC4Q2M389 1173 aa15.99■□□□□ 0.15
TRAPPC9-206ENST00000519482 KSR2Q6VAB6 950 aa15.99■□□□□ 0.15
TRAPPC9-206ENST00000519482 MAP3K2Q9Y2U5 619 aa15.99■□□□□ 0.15
TRAPPC9-206ENST00000519482 GMPSP49915 693 aaPredicted RBP15.98■□□□□ 0.15
TRAPPC9-206ENST00000519482 TWISTNBQ3B726 338 aaPredicted RBP15.98■□□□□ 0.15
TRAPPC9-206ENST00000519482 CCDC152Q4G0S7 254 aa15.98■□□□□ 0.15
TRAPPC9-206ENST00000519482 EYA3Q99504 573 aa15.98■□□□□ 0.15
TRAPPC9-206ENST00000519482 PI4KAP2A4QPH2 592 aa15.97■□□□□ 0.15
TRAPPC9-206ENST00000519482 RASSF10A6NK89 507 aa15.97■□□□□ 0.15
TRAPPC9-206ENST00000519482 RAD17O75943 681 aa15.97■□□□□ 0.15
TRAPPC9-206ENST00000519482 GPSM2P81274 684 aa15.97■□□□□ 0.15
TRAPPC9-206ENST00000519482 COL13A1Q5TAT6 717 aaPredicted RBP15.97■□□□□ 0.15
TRAPPC9-206ENST00000519482 PI4KAP1Q8N8J0 262 aa15.97■□□□□ 0.15
TRAPPC9-206ENST00000519482 BCL2L13Q9BXK5 485 aa15.97■□□□□ 0.15
TRAPPC9-206ENST00000519482 PODXL2Q9NZ53 605 aa15.97■□□□□ 0.15
TRAPPC9-206ENST00000519482 YDJCA8MPS7 323 aa15.96■□□□□ 0.15
TRAPPC9-206ENST00000519482 C6orf229H3BNL8 230 aa15.96■□□□□ 0.15
TRAPPC9-206ENST00000519482 NEXNQ0ZGT2 675 aa15.96■□□□□ 0.15
TRAPPC9-206ENST00000519482 DEFB115Q30KQ5 88 aa15.96■□□□□ 0.15
TRAPPC9-206ENST00000519482 SEC31BQ9NQW1 1179 aa15.96■□□□□ 0.15
TRAPPC9-206ENST00000519482 POLLQ9UGP5 575 aa15.96■□□□□ 0.15
TRAPPC9-206ENST00000519482 IGKV5-2P06315 115 aa15.95■□□□□ 0.14
TRAPPC9-206ENST00000519482 VEGFBP49765 207 aa15.95■□□□□ 0.14
TRAPPC9-206ENST00000519482 WDR63Q8IWG1 891 aa15.95■□□□□ 0.14
TRAPPC9-206ENST00000519482 TBC1D16Q8TBP0 767 aa15.95■□□□□ 0.14
TRAPPC9-206ENST00000519482 ZC3H15Q8WU90 426 aaKnown RBP15.95■□□□□ 0.14
TRAPPC9-206ENST00000519482 PGAP2Q9UHJ9 254 aa15.95■□□□□ 0.14
TRAPPC9-206ENST00000519482 PSME4Q14997 1843 aa15.95■□□□□ 0.14
TRAPPC9-206ENST00000519482 SPEF2Q9C093 1822 aa15.94■□□□□ 0.14
TRAPPC9-206ENST00000519482 RIMBP2O15034 1052 aa15.94■□□□□ 0.14
TRAPPC9-206ENST00000519482 SLC4A2P04920 1241 aa15.94■□□□□ 0.14
TRAPPC9-206ENST00000519482 DPF2Q92785 391 aa15.94■□□□□ 0.14
TRAPPC9-206ENST00000519482 ZC3H12CQ9C0D7 883 aaKnown RBP15.94■□□□□ 0.14
TRAPPC9-206ENST00000519482 DBNDD1Q9H9R9 158 aa15.94■□□□□ 0.14
TRAPPC9-206ENST00000519482 CNOT7Q9UIV1 285 aaKnown RBP15.94■□□□□ 0.14
TRAPPC9-206ENST00000519482 SCN9AQ15858 1988 aa15.93■□□□□ 0.14
TRAPPC9-206ENST00000519482 H7C1D1 291 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms